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The map label for this gene is sanA [H]

Identifier: 59712167

GI number: 59712167

Start: 1745610

End: 1746287

Strand: Direct

Name: sanA [H]

Synonym: VF_1560

Alternate gene names: 59712167

Gene position: 1745610-1746287 (Clockwise)

Preceding gene: 59712166

Following gene: 59712170

Centisome position: 60.24

GC content: 36.73

Gene sequence:

>678_bases
ATGGCAGTTTCAAAAATAGAGATATTTAAGAAGTGGATAAAAATAGTTTTGATCGTAGTTATCGCTGCAACATCGGCTAT
TTTGACTCCCGATGTCTATATGTCACTATCAACACAATCACAACTTTATAAACAGGTTGAAGCTCTTCCAGAGCAAGAAA
CGGCTCTGGTTCTTGGCACGAGCAAGTATATTCGTCGTACATTAAACCCTTACTACCAATATCGCATTGATGCCGCAATT
GAATTATTCAAGCAAAATAAAGTTTCGCATTTTTTACTCAGTGGAGATAATGCTCATCGTTCATATAACGAACCATGGAC
AATGAAGCGAGACTTATTAAAAGCAGGAATACCAGAAGATAGAATAACATTAGACTATGCAGGGTTTCGTACTCTAGATT
CCGTTCAGCGAGCAAAAGAAATTTTTGATGCAAATAGCTTAACGATCGTTTCACAACAGTTTCATTGCCAACGAGCTGTT
TTCATTGCGAATCATTTCGATATGGATACGGTTTGTTTAGTCGTTCCATCCCCTTCTGGCTGGGCGAATACAAAAATTAG
ATTTAGAGAAGTATTAGCAAGAACCAAAGCAGTATTAGATTTATATATTTTTAATGTACAGCCTAAATTCCTTGGGCCTA
AAGAACCTATTGATCACAGAACTCTCCCTAAAGAATAA

Upstream 100 bases:

>100_bases
CTTTTATGCTTGCTATTGTTTTTTCGACCTTTATTATTATCGGTATATGGGCACAAAAAAATCGTCAAGTATGATCATGA
TGCATTAAAGTTGAGGGATA

Downstream 100 bases:

>100_bases
CTCACCAGAAACCATTAGATATAAAAACCCTAGCTTCAGCAGCTAGGGTTTGAACTTAATTCATATAATGTATATTTGAA
CTTGAGTTAACAATATTAGA

Product: SanA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MAVSKIEIFKKWIKIVLIVVIAATSAILTPDVYMSLSTQSQLYKQVEALPEQETALVLGTSKYIRRTLNPYYQYRIDAAI
ELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPEDRITLDYAGFRTLDSVQRAKEIFDANSLTIVSQQFHCQRAV
FIANHFDMDTVCLVVPSPSGWANTKIRFREVLARTKAVLDLYIFNVQPKFLGPKEPIDHRTLPKE

Sequences:

>Translated_225_residues
MAVSKIEIFKKWIKIVLIVVIAATSAILTPDVYMSLSTQSQLYKQVEALPEQETALVLGTSKYIRRTLNPYYQYRIDAAI
ELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPEDRITLDYAGFRTLDSVQRAKEIFDANSLTIVSQQFHCQRAV
FIANHFDMDTVCLVVPSPSGWANTKIRFREVLARTKAVLDLYIFNVQPKFLGPKEPIDHRTLPKE
>Mature_224_residues
AVSKIEIFKKWIKIVLIVVIAATSAILTPDVYMSLSTQSQLYKQVEALPEQETALVLGTSKYIRRTLNPYYQYRIDAAIE
LFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPEDRITLDYAGFRTLDSVQRAKEIFDANSLTIVSQQFHCQRAVF
IANHFDMDTVCLVVPSPSGWANTKIRFREVLARTKAVLDLYIFNVQPKFLGPKEPIDHRTLPKE

Specific function: Participates in the barrier function of the cell envelope [H]

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788466, Length=188, Percent_Identity=48.936170212766, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1789468, Length=224, Percent_Identity=35.7142857142857, Blast_Score=150, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25822; Mature: 25691

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSKIEIFKKWIKIVLIVVIAATSAILTPDVYMSLSTQSQLYKQVEALPEQETALVLGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHHCCCCCCEEEEEC
SKYIRRTLNPYYQYRIDAAIELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPED
HHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCC
RITLDYAGFRTLDSVQRAKEIFDANSLTIVSQQFHCQRAVFIANHFDMDTVCLVVPSPSG
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEEEEECCCCCEEEEEEECCCC
WANTKIRFREVLARTKAVLDLYIFNVQPKFLGPKEPIDHRTLPKE
CCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVSKIEIFKKWIKIVLIVVIAATSAILTPDVYMSLSTQSQLYKQVEALPEQETALVLGT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHHHCCCCCCEEEEEC
SKYIRRTLNPYYQYRIDAAIELFKQNKVSHFLLSGDNAHRSYNEPWTMKRDLLKAGIPED
HHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCC
RITLDYAGFRTLDSVQRAKEIFDANSLTIVSQQFHCQRAVFIANHFDMDTVCLVVPSPSG
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEEEEECCCCCEEEEEEECCCC
WANTKIRFREVLARTKAVLDLYIFNVQPKFLGPKEPIDHRTLPKE
CCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]