| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712170
Identifier: 59712170
GI number: 59712170
Start: 1749451
End: 1749819
Strand: Direct
Name: 59712170
Synonym: VF_1563
Alternate gene names: NA
Gene position: 1749451-1749819 (Clockwise)
Preceding gene: 59712167
Following gene: 59712178
Centisome position: 60.38
GC content: 31.17
Gene sequence:
>369_bases GTGAAAATTTCAGAATTGATTCAAAATTTACAAAGCATTCAAAAAGAACATGGCAATGATATTGAAGTCGTTACAGGTGA AGAGTGGTTCCCTGAACAACTGTTAACTTCTTCAGTTAATCATAATATGGCTTTTTTAAAGTTTGATCGCTTACCTTGTG ATATTCCAGCAGAGATAGATGCCCGAGGTTTTCTAGAGCACGAAGAAATTTTAATAAAACAATTAGTAAACAATGTAATT TTTAGCGAACTAGAACCAGAAATGATGGTAGATAAACTAACTGACATGCTCGTATTTAGTCATGAAAATATCAGTTGTGA TGTTATCGAACATTTTAGTCAATTAGAAAATAAAAAAATAGGCGTATAA
Upstream 100 bases:
>100_bases AACAGATAAGCAATTGAAGTAAAAAACAATTCAATCAACTTTATAATTTGAGTATAGTGTCGTTATTAAAAAATATAAAT CATCGCCTTGAGAAATTAAC
Downstream 100 bases:
>100_bases CACGCCTATTTTTTATCTTAATTAATAATATTAAGATAAAGGATACCAAAACATTGATGTATCCATTATTTTTTTAGTAA TAGCTAAAGAAACAACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKISELIQNLQSIQKEHGNDIEVVTGEEWFPEQLLTSSVNHNMAFLKFDRLPCDIPAEIDARGFLEHEEILIKQLVNNVI FSELEPEMMVDKLTDMLVFSHENISCDVIEHFSQLENKKIGV
Sequences:
>Translated_122_residues MKISELIQNLQSIQKEHGNDIEVVTGEEWFPEQLLTSSVNHNMAFLKFDRLPCDIPAEIDARGFLEHEEILIKQLVNNVI FSELEPEMMVDKLTDMLVFSHENISCDVIEHFSQLENKKIGV >Mature_122_residues MKISELIQNLQSIQKEHGNDIEVVTGEEWFPEQLLTSSVNHNMAFLKFDRLPCDIPAEIDARGFLEHEEILIKQLVNNVI FSELEPEMMVDKLTDMLVFSHENISCDVIEHFSQLENKKIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14096; Mature: 14096
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISELIQNLQSIQKEHGNDIEVVTGEEWFPEQLLTSSVNHNMAFLKFDRLPCDIPAEID CCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCC ARGFLEHEEILIKQLVNNVIFSELEPEMMVDKLTDMLVFSHENISCDVIEHFSQLENKKI CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GV CC >Mature Secondary Structure MKISELIQNLQSIQKEHGNDIEVVTGEEWFPEQLLTSSVNHNMAFLKFDRLPCDIPAEID CCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCC ARGFLEHEEILIKQLVNNVIFSELEPEMMVDKLTDMLVFSHENISCDVIEHFSQLENKKI CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA