| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712114
Identifier: 59712114
GI number: 59712114
Start: 1680460
End: 1680810
Strand: Direct
Name: 59712114
Synonym: VF_1507
Alternate gene names: NA
Gene position: 1680460-1680810 (Clockwise)
Preceding gene: 59712112
Following gene: 59712117
Centisome position: 58.0
GC content: 34.47
Gene sequence:
>351_bases ATGAGCAAATTAACGTCAGATACTCAAGCAAACTTAGAACTTTTCATTTCAGAGACAAAAGAAACACAACTAGTGTGGAG TCTTTATAATGAAGACGGTTGGATTTCAGTAGAATCAACAGAATTTGAAAACTCTGAAGTAATGCCATTCTGGTCTAATA AAGAAGATGCTGCTTTTCACAACGTTGAAGAATGGGCTGACTTTGAAGTAACAGAAATCCCACTAGATATTTTTGTTGAA GATTGGTTAATCACTCTTTCTGAAGATGGTGTTTTAGTTGGTACTAACTGGAATCAACAACTAGAAGGTAAAGAAGTAGA AGCAAGCGATTTAGCTAAGCTTTACTTATAA
Upstream 100 bases:
>100_bases TTAACTGATAGTTTTATAACATAAAATCATATAAATTTAAGTACCAATATTCTCATATTCCTTTATTATTCGTTCTGTTT ATCCTAAAAGAGACATTGTC
Downstream 100 bases:
>100_bases GGTTTATTTTATCTTTAATGATAAAAATAAAGGTGGTCAATTATGACCACCTTTTTGTTTTTAATGTCTATTAAGTTACT GAGTCAATTGTGTTCTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSKLTSDTQANLELFISETKETQLVWSLYNEDGWISVESTEFENSEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFVE DWLITLSEDGVLVGTNWNQQLEGKEVEASDLAKLYL
Sequences:
>Translated_116_residues MSKLTSDTQANLELFISETKETQLVWSLYNEDGWISVESTEFENSEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFVE DWLITLSEDGVLVGTNWNQQLEGKEVEASDLAKLYL >Mature_115_residues SKLTSDTQANLELFISETKETQLVWSLYNEDGWISVESTEFENSEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFVED WLITLSEDGVLVGTNWNQQLEGKEVEASDLAKLYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13399; Mature: 13268
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLTSDTQANLELFISETKETQLVWSLYNEDGWISVESTEFENSEVMPFWSNKEDAAFH CCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEECEEECCCCCCCCC NVEEWADFEVTEIPLDIFVEDWLITLSEDGVLVGTNWNQQLEGKEVEASDLAKLYL CHHHHCCCEEEECCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHEECC >Mature Secondary Structure SKLTSDTQANLELFISETKETQLVWSLYNEDGWISVESTEFENSEVMPFWSNKEDAAFH CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEECEEECCCCCCCCC NVEEWADFEVTEIPLDIFVEDWLITLSEDGVLVGTNWNQQLEGKEVEASDLAKLYL CHHHHCCCEEEECCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA