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The map label for this gene is ompA [C]

Identifier: 59712106

GI number: 59712106

Start: 1657827

End: 1658300

Strand: Reverse

Name: ompA [C]

Synonym: VF_1499

Alternate gene names: 59712106

Gene position: 1658300-1657827 (Counterclockwise)

Preceding gene: 59712107

Following gene: 59712104

Centisome position: 57.23

GC content: 42.19

Gene sequence:

>474_bases
ATGAAAAAGACACTTTTAGCGTTAGCTCTAGCAAGCGTATCAGTAACAGCTGCTGCAGACTCTCTAATTTATGGTGGCGT
ACAAGTTGGTTCTGCTGATTACAGAAGCGAGAGCTCAACGGTATACGGTGCTCATATTGGTACAGGTCTACTGCCTTTCA
TTGGTCTTGAAATGGGTGCTTGGAACTTAGGTTCTTATGATGTTGCTGGTCAAACAACAGACGTAACTTCTGTAAACTTT
GCAGTTAAACCAAGCATCGACTTTGGTCCTCTACACGTTTACGGCAAAGCAGGTATGCACAGCTGGGAAGAGAAAGGTGC
ATTCAAAGATGACGGCGTAGATCCATTTTTCGGTTTAGGTATTGAATACAACATCATCCCAATGTTCACAGTAGGTGCTG
GTTACAATAACTTCACTGTTGACGACAAAAACATCGATTTCGCATCTATTAACCTAACGGTTCACTTCCTATAA

Upstream 100 bases:

>100_bases
TAAACTAGAATTAATTTCGGCATGTTAATTGCTTCAATAACCATAATATTAAAAAGAGCGTCAAAGGTTGCCGCTCCCTT
TTGTAAAAATAGGATTTAAG

Downstream 100 bases:

>100_bases
TTACGAAATCTTTCGTTTTCATTATATGAAGAGATAAAAAATGGCGGCCAATGCGGTCGCCATTTTTATTTGGTCATCAG
TAAAATAAATACTAATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKKTLLALALASVSVTAAADSLIYGGVQVGSADYRSESSTVYGAHIGTGLLPFIGLEMGAWNLGSYDVAGQTTDVTSVNF
AVKPSIDFGPLHVYGKAGMHSWEEKGAFKDDGVDPFFGLGIEYNIIPMFTVGAGYNNFTVDDKNIDFASINLTVHFL

Sequences:

>Translated_157_residues
MKKTLLALALASVSVTAAADSLIYGGVQVGSADYRSESSTVYGAHIGTGLLPFIGLEMGAWNLGSYDVAGQTTDVTSVNF
AVKPSIDFGPLHVYGKAGMHSWEEKGAFKDDGVDPFFGLGIEYNIIPMFTVGAGYNNFTVDDKNIDFASINLTVHFL
>Mature_157_residues
MKKTLLALALASVSVTAAADSLIYGGVQVGSADYRSESSTVYGAHIGTGLLPFIGLEMGAWNLGSYDVAGQTTDVTSVNF
AVKPSIDFGPLHVYGKAGMHSWEEKGAFKDDGVDPFFGLGIEYNIIPMFTVGAGYNNFTVDDKNIDFASINLTVHFL

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16667; Mature: 16667

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLALALASVSVTAAADSLIYGGVQVGSADYRSESSTVYGAHIGTGLLPFIGLEMGA
CCHHHEEHHHHHEEEECCCCCEEECCEEECCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
WNLGSYDVAGQTTDVTSVNFAVKPSIDFGPLHVYGKAGMHSWEEKGAFKDDGVDPFFGLG
CCCCCEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEECC
IEYNIIPMFTVGAGYNNFTVDDKNIDFASINLTVHFL
EEEEEEEEEEECCCCCCCEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKKTLLALALASVSVTAAADSLIYGGVQVGSADYRSESSTVYGAHIGTGLLPFIGLEMGA
CCHHHEEHHHHHEEEECCCCCEEECCEEECCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
WNLGSYDVAGQTTDVTSVNFAVKPSIDFGPLHVYGKAGMHSWEEKGAFKDDGVDPFFGLG
CCCCCEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEECC
IEYNIIPMFTVGAGYNNFTVDDKNIDFASINLTVHFL
EEEEEEEEEEECCCCCCCEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA