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The map label for this gene is hrpA [H]

Identifier: 59712107

GI number: 59712107

Start: 1658410

End: 1662249

Strand: Reverse

Name: hrpA [H]

Synonym: VF_1500

Alternate gene names: 59712107

Gene position: 1662249-1658410 (Counterclockwise)

Preceding gene: 59712109

Following gene: 59712106

Centisome position: 57.37

GC content: 40.0

Gene sequence:

>3840_bases
ATGATGCGTGATCGTTTTCGCCTAAGTAAACGCATTCAAGGCGCATCTCGAATCAAAAAAGAAGAATCAAGACACGCCGT
GTTTGATGAAATTGCATTAGATATCGCACAATCAATGCAAACGGCGAATAATCGTGAAACTGATCGTCCGACGATTTCTT
ACCCAGAACAACTACCTGTTAGCCAGAAAAAAGATGAAATTGCAGAAGCAATCAAAAATAACCAAGTGGTTATCGTTGCT
GGTGAAACCGGTTCAGGTAAAACCACGCAGTTACCTAAAATCTGTTTAGAACTAGGTCGCGGTAAGTTTGGTAATATTGG
TCATACGCAACCTCGTCGTTTAGCGGCTCGTTCAGTAGCAGATCGTATTGCTGAAGAGATGGAGACAGAACTAGGTAGCC
ATGTTGGTTATAAAGTTCGTTTTAATGATCAAGTCTCTGACCGTACACAAGTTAAATTAATGACGGATGGTATCTTACTG
GCTGAGATCCAGAATGACCGTTACTTAAATCAATATGACACATTAATTATCGATGAAGCGCACGAACGCAGCTTAAACAT
CGATTTTATTATGGGTTATTTACGTGAGTTATTACCAAAGCGTCCTGATTTAAAAGTCATTATCACGTCAGCAACTATCG
ATCCTGAGCGTTTCTCAAAACACTTCAATAATGCACCAATGATTGAAGTATCTGGTCGTACTTATCCGGTTGAAACTCGT
TATCGTCCAATTGTTGAAGATGGTGATGATACCGATCGTGACCAATTAGAAGGTATCTTTGATGCAGTAGATGAACTGTG
TGAAGAAGGGCTGGGTGACATTCTGATCTTTATGACGGGTGAACGAGAAATTCGTGATACCGCAGAAGCATTAGAAAAAC
GTAATCTACGTGATACGGAAATTGTACCGTTATACGCACGTTTATCTGCACAAGAGCAGAATCGTGTCTTCCAACCACAC
GCTGGTCGTCGAATTGTATTAGCCACTAACGTAGCAGAAACATCTCTTACTGTTCCGGGAATCAAATACGTTATAGATCC
AGGTACTGCACGTATTAGTCGCTATAGCTATCGCACCAAAGTACAACGTTTACCAATCGAAGCGATTTCACAAGCCAGTG
CAAATCAGCGTAAAGGTCGTTGTGGTCGTGTATCTGAAGGTATCTGTATTCGTCTTTACTCTGAAGAAGATTTTATTTCT
CGTCCAGAGTTTACCGACCCTGAGATCTTACGTACTAACCTAGCGTCTGTAATTTTACAGATGACAGCGTTAGGGTTAGG
TGATATTCAAGCCTTCCCATTTGTAGAAGCCCCTGATAATCGCAATATTCAAGATGGTATCAAGCTACTTGAAGAGCTAG
GTGCGATTAATTCAAATGCGAAAGACCCGAAGAAAAGCTTAACTAAAGTTGGTCGTGAATTAGCACGTCTTCCGATTGAT
CCACGTTTAGCTAGAATGGTACTTGAAGCCCCGAAATATAATGCATTACAAGAAGTGATGATCATTGCAGCGGCACTATC
AATTCAAGACCCACGAGAGCGTCCAAGCGATAAGAAACAACAATCTGATGATAAGCATAAACGCTTTAATCATGAAGATT
CGGATTTCTTAACGTTTGTGAACGTGTGGGAACATGTAAAAGCAAAACAGAAAGAGCTTTCAAGTAATCAATTTAGAAAG
CAATGTCGTAAAGACTTTTTGAACTATTTACGTGTACGTGAATGGCAAGATGTTCACTACCAATTAAGCCAAGTAATGAA
AGAGCTTAATTACAAAGTGAATCAAGAAGCGGCAGGCTATCAAGGTGTTCATACTGCAATTTTAGCGGGTATGCTTTCTC
ATATTGGTCAAAAAGACCAAGAAAAGAATGAATACCAAGGTGCACGTAATGCACGATTCCACATCTTCCCTGCTTCTGGT
TTATTCAAGAAACAACCAAAATGGGTCATGGTTGCTGAACTGGTTGAAACCTCAAAACTTTGGGGTCGAATTGTTGCGAA
AATTCAGCCTGAATGGATTGAACCATTAGCAGGGCATTTGATTAAGCGCAGTTACAGTGAACCACATTGGTCGAAGAAAT
CAGCAGCAGTAATGGCTTATGAAAAAGTCACTATTTACGGTATTCCGATTGTACCTAAACGCCAAATTAACTACGGTGCG
ATTGATGCGCCTGTGTGTCGTGAAATTTTTATTCGTTCAGCTCTAGTTGAAGGTGATTGGCATACTAAGCATCAGTTTTT
TAAACAAAACCGTAAGTTATTACAAGAAGTTGAAGAACTTGAGCATAAGTCTCGTCGTCGCGATATTCTTGTTGATGATG
ATCAGTTAGCTGAATTCTACGATCAACGAGTTGGCGTAGATGTAGTATCTGGCCGTCATTTTGATACGTGGTGGAAGAAA
GCGCAAAAAGAGACGCCAGAGTTATTAAACTTTGAAAAAGAAATGCTGTTCCGTGGTGATGCAAGCCATGTAACGGATTT
AGATTATCCAAACTTCTGGCATCAAGGAAACTTAAAACTAAAATTAAGTTACCAATTTGAGCCGGGGCAAGACAGCGATG
GTGTAACGGTACATGTACCACTACCAATTTTAAACCAAGTTGAACCTTATGGCTTTGATTGGCAGATCCCAGGTCTACGT
CACGAATTAGTGATGGCGTTGATTAAGTCGTTACCTAAAACCGTTCGTAAGAATTTCGTACCAGCACCTAATTATGCTGA
TGCATTTTTATCTCGTGCTGTACCGTTCGAAGCGCCGTTATTAGACAGTTTAGAAAAAGAACTTCGTCGAATGACAGGGT
TTGAAGTGTTCCGTGACGATTGGAAACTAGAACAGATCCCAGATCACTTAAAAGTGACATATCGTGTTGTTGACCATCGT
AATCGCAAGCTAAAAGAAAGCCGTGATTTGTATGAGTTAAAAGAAGGCTTAAAAGATAAAGTTCAAGAAACATTATCACA
AGTTGCGGATGATGATATTGAGCAAAAAGGCCTTAAAACATGGAGCTTTGGTGAGTTACCAACGTTGTATAAACAGAAAC
GTGGTGGATTTGAAGTTAAAGCATATCCAGCGATTGTTGATGGTAAAGACAGTGTAGAAATTAAACTGTTTGAAACAGAA
GAAGAGCAGCACAATGCAATGAAGGCAGGCCAACGTCGTCTAATTCTTCTTAATGTGCCATCACCAATTAAGTATTTACA
TGACAATCTTCCTAATAAATCGAAATTAGGATTGTACTTTAATCAGTATGGTCGTGTGATGGACTTGATTGATGATTGCA
TTGCTTGTGGTATCGATAAGTTAATTGATGAGCAGGGTGGTCTTGTTTGGCAACCTGAAGCCTTTGAAAAAATGAAAGAA
CATATCCGAGCAGAGCTTGGGGATACGGTTGTTGAGATCGCAAAACAAGTTGAAACGATTTTAACTACCGCTTTCCAAAT
TCAGAAAAAGTTAAAAGGGCGTGTTGATTTAAGCATGGCGTTTGCGCTTTCGGATATTAAAGCTCAGATAGAGAATCTTA
TCTTTAAAGGATTTGCAACGGAGTGCGGTTGGAAGCGTCTTCAAGATATCCACCGTTACATGAAAGCGATTGAGCGTCGA
ATGGAAAAACTGCCGATCGATCCAAATCGTGATCGCATGCATTTGCTTAAAGTCGAAGGGATCACCAGTGATTATAAAGA
ATTACTGAATAAGATACCGAAAGGACAACCAATTCCTGACAAAGTAAAAGAGATCCGTTGGATGATTGAAGAGTTAAGAG
TGAGCTATTTTGCTCAACAATTGGGGACACCATATCCAGTTTCTGATAAACGAGTCAAAAATGCCATTGCCGATTGCTAA

Upstream 100 bases:

>100_bases
GCTTTAGTTATTAGAATAAATAAAAGATTCAGTAGGAAATATTTTGAGTCAATCAAATCAAAATTCAGCATCAACACTTA
GAAAAGCATTAAGTGAATGT

Downstream 100 bases:

>100_bases
TGTATCACCTAAACTAGAATTAATTTCGGCATGTTAATTGCTTCAATAACCATAATATTAAAAAGAGCGTCAAAGGTTGC
CGCTCCCTTTTGTAAAAATA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1279; Mature: 1279

Protein sequence:

>1279_residues
MMRDRFRLSKRIQGASRIKKEESRHAVFDEIALDIAQSMQTANNRETDRPTISYPEQLPVSQKKDEIAEAIKNNQVVIVA
GETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFNDQVSDRTQVKLMTDGILL
AEIQNDRYLNQYDTLIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHFNNAPMIEVSGRTYPVETR
YRPIVEDGDDTDRDQLEGIFDAVDELCEEGLGDILIFMTGEREIRDTAEALEKRNLRDTEIVPLYARLSAQEQNRVFQPH
AGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVSEGICIRLYSEEDFIS
RPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGIKLLEELGAINSNAKDPKKSLTKVGRELARLPID
PRLARMVLEAPKYNALQEVMIIAAALSIQDPRERPSDKKQQSDDKHKRFNHEDSDFLTFVNVWEHVKAKQKELSSNQFRK
QCRKDFLNYLRVREWQDVHYQLSQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPASG
LFKKQPKWVMVAELVETSKLWGRIVAKIQPEWIEPLAGHLIKRSYSEPHWSKKSAAVMAYEKVTIYGIPIVPKRQINYGA
IDAPVCREIFIRSALVEGDWHTKHQFFKQNRKLLQEVEELEHKSRRRDILVDDDQLAEFYDQRVGVDVVSGRHFDTWWKK
AQKETPELLNFEKEMLFRGDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLPILNQVEPYGFDWQIPGLR
HELVMALIKSLPKTVRKNFVPAPNYADAFLSRAVPFEAPLLDSLEKELRRMTGFEVFRDDWKLEQIPDHLKVTYRVVDHR
NRKLKESRDLYELKEGLKDKVQETLSQVADDDIEQKGLKTWSFGELPTLYKQKRGGFEVKAYPAIVDGKDSVEIKLFETE
EEQHNAMKAGQRRLILLNVPSPIKYLHDNLPNKSKLGLYFNQYGRVMDLIDDCIACGIDKLIDEQGGLVWQPEAFEKMKE
HIRAELGDTVVEIAKQVETILTTAFQIQKKLKGRVDLSMAFALSDIKAQIENLIFKGFATECGWKRLQDIHRYMKAIERR
MEKLPIDPNRDRMHLLKVEGITSDYKELLNKIPKGQPIPDKVKEIRWMIEELRVSYFAQQLGTPYPVSDKRVKNAIADC

Sequences:

>Translated_1279_residues
MMRDRFRLSKRIQGASRIKKEESRHAVFDEIALDIAQSMQTANNRETDRPTISYPEQLPVSQKKDEIAEAIKNNQVVIVA
GETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFNDQVSDRTQVKLMTDGILL
AEIQNDRYLNQYDTLIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHFNNAPMIEVSGRTYPVETR
YRPIVEDGDDTDRDQLEGIFDAVDELCEEGLGDILIFMTGEREIRDTAEALEKRNLRDTEIVPLYARLSAQEQNRVFQPH
AGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVSEGICIRLYSEEDFIS
RPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGIKLLEELGAINSNAKDPKKSLTKVGRELARLPID
PRLARMVLEAPKYNALQEVMIIAAALSIQDPRERPSDKKQQSDDKHKRFNHEDSDFLTFVNVWEHVKAKQKELSSNQFRK
QCRKDFLNYLRVREWQDVHYQLSQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPASG
LFKKQPKWVMVAELVETSKLWGRIVAKIQPEWIEPLAGHLIKRSYSEPHWSKKSAAVMAYEKVTIYGIPIVPKRQINYGA
IDAPVCREIFIRSALVEGDWHTKHQFFKQNRKLLQEVEELEHKSRRRDILVDDDQLAEFYDQRVGVDVVSGRHFDTWWKK
AQKETPELLNFEKEMLFRGDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLPILNQVEPYGFDWQIPGLR
HELVMALIKSLPKTVRKNFVPAPNYADAFLSRAVPFEAPLLDSLEKELRRMTGFEVFRDDWKLEQIPDHLKVTYRVVDHR
NRKLKESRDLYELKEGLKDKVQETLSQVADDDIEQKGLKTWSFGELPTLYKQKRGGFEVKAYPAIVDGKDSVEIKLFETE
EEQHNAMKAGQRRLILLNVPSPIKYLHDNLPNKSKLGLYFNQYGRVMDLIDDCIACGIDKLIDEQGGLVWQPEAFEKMKE
HIRAELGDTVVEIAKQVETILTTAFQIQKKLKGRVDLSMAFALSDIKAQIENLIFKGFATECGWKRLQDIHRYMKAIERR
MEKLPIDPNRDRMHLLKVEGITSDYKELLNKIPKGQPIPDKVKEIRWMIEELRVSYFAQQLGTPYPVSDKRVKNAIADC
>Mature_1279_residues
MMRDRFRLSKRIQGASRIKKEESRHAVFDEIALDIAQSMQTANNRETDRPTISYPEQLPVSQKKDEIAEAIKNNQVVIVA
GETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFNDQVSDRTQVKLMTDGILL
AEIQNDRYLNQYDTLIIDEAHERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHFNNAPMIEVSGRTYPVETR
YRPIVEDGDDTDRDQLEGIFDAVDELCEEGLGDILIFMTGEREIRDTAEALEKRNLRDTEIVPLYARLSAQEQNRVFQPH
AGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVSEGICIRLYSEEDFIS
RPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGIKLLEELGAINSNAKDPKKSLTKVGRELARLPID
PRLARMVLEAPKYNALQEVMIIAAALSIQDPRERPSDKKQQSDDKHKRFNHEDSDFLTFVNVWEHVKAKQKELSSNQFRK
QCRKDFLNYLRVREWQDVHYQLSQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPASG
LFKKQPKWVMVAELVETSKLWGRIVAKIQPEWIEPLAGHLIKRSYSEPHWSKKSAAVMAYEKVTIYGIPIVPKRQINYGA
IDAPVCREIFIRSALVEGDWHTKHQFFKQNRKLLQEVEELEHKSRRRDILVDDDQLAEFYDQRVGVDVVSGRHFDTWWKK
AQKETPELLNFEKEMLFRGDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLPILNQVEPYGFDWQIPGLR
HELVMALIKSLPKTVRKNFVPAPNYADAFLSRAVPFEAPLLDSLEKELRRMTGFEVFRDDWKLEQIPDHLKVTYRVVDHR
NRKLKESRDLYELKEGLKDKVQETLSQVADDDIEQKGLKTWSFGELPTLYKQKRGGFEVKAYPAIVDGKDSVEIKLFETE
EEQHNAMKAGQRRLILLNVPSPIKYLHDNLPNKSKLGLYFNQYGRVMDLIDDCIACGIDKLIDEQGGLVWQPEAFEKMKE
HIRAELGDTVVEIAKQVETILTTAFQIQKKLKGRVDLSMAFALSDIKAQIENLIFKGFATECGWKRLQDIHRYMKAIERR
MEKLPIDPNRDRMHLLKVEGITSDYKELLNKIPKGQPIPDKVKEIRWMIEELRVSYFAQQLGTPYPVSDKRVKNAIADC

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI68509926, Length=645, Percent_Identity=38.1395348837209, Blast_Score=444, Evalue=1e-124,
Organism=Homo sapiens, GI4826690, Length=640, Percent_Identity=37.5, Blast_Score=426, Evalue=1e-119,
Organism=Homo sapiens, GI255982614, Length=650, Percent_Identity=37.3846153846154, Blast_Score=417, Evalue=1e-116,
Organism=Homo sapiens, GI256000749, Length=650, Percent_Identity=37.3846153846154, Blast_Score=417, Evalue=1e-116,
Organism=Homo sapiens, GI17999539, Length=632, Percent_Identity=36.5506329113924, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI20544129, Length=668, Percent_Identity=35.1796407185629, Blast_Score=385, Evalue=1e-106,
Organism=Homo sapiens, GI20336302, Length=659, Percent_Identity=33.0804248861912, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI38158022, Length=554, Percent_Identity=36.6425992779783, Blast_Score=370, Evalue=1e-102,
Organism=Homo sapiens, GI261878478, Length=655, Percent_Identity=33.1297709923664, Blast_Score=359, Evalue=1e-98,
Organism=Homo sapiens, GI299829255, Length=617, Percent_Identity=34.8460291734198, Blast_Score=351, Evalue=3e-96,
Organism=Homo sapiens, GI167830433, Length=567, Percent_Identity=32.9805996472663, Blast_Score=271, Evalue=2e-72,
Organism=Homo sapiens, GI261878481, Length=609, Percent_Identity=29.5566502463054, Blast_Score=266, Evalue=7e-71,
Organism=Homo sapiens, GI20336290, Length=526, Percent_Identity=33.4600760456274, Blast_Score=266, Evalue=8e-71,
Organism=Homo sapiens, GI20336294, Length=605, Percent_Identity=31.7355371900826, Blast_Score=266, Evalue=9e-71,
Organism=Homo sapiens, GI167830436, Length=564, Percent_Identity=32.6241134751773, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI166851804, Length=602, Percent_Identity=32.5581395348837, Blast_Score=254, Evalue=4e-67,
Organism=Homo sapiens, GI20336300, Length=648, Percent_Identity=26.8518518518519, Blast_Score=232, Evalue=1e-60,
Organism=Homo sapiens, GI100913206, Length=636, Percent_Identity=29.4025157232704, Blast_Score=232, Evalue=2e-60,
Organism=Homo sapiens, GI163914394, Length=648, Percent_Identity=25.462962962963, Blast_Score=202, Evalue=2e-51,
Organism=Homo sapiens, GI67782362, Length=283, Percent_Identity=35.3356890459364, Blast_Score=165, Evalue=3e-40,
Organism=Homo sapiens, GI29029601, Length=422, Percent_Identity=29.6208530805687, Blast_Score=160, Evalue=8e-39,
Organism=Homo sapiens, GI39777586, Length=359, Percent_Identity=29.2479108635098, Blast_Score=154, Evalue=5e-37,
Organism=Homo sapiens, GI269847874, Length=192, Percent_Identity=41.1458333333333, Blast_Score=152, Evalue=1e-36,
Organism=Escherichia coli, GI145693127, Length=1276, Percent_Identity=70.6896551724138, Blast_Score=1899, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=535, Percent_Identity=32.7102803738318, Blast_Score=241, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI25144243, Length=650, Percent_Identity=36.4615384615385, Blast_Score=420, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI17535281, Length=652, Percent_Identity=36.8098159509202, Blast_Score=417, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI32565154, Length=644, Percent_Identity=36.4906832298137, Blast_Score=415, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI17554326, Length=636, Percent_Identity=38.5220125786164, Blast_Score=405, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17531507, Length=691, Percent_Identity=35.3111432706223, Blast_Score=399, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17556386, Length=647, Percent_Identity=35.0850077279753, Blast_Score=366, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI71990212, Length=683, Percent_Identity=32.796486090776, Blast_Score=349, Evalue=5e-96,
Organism=Caenorhabditis elegans, GI71996313, Length=503, Percent_Identity=36.3817097415507, Blast_Score=312, Evalue=7e-85,
Organism=Caenorhabditis elegans, GI17552054, Length=415, Percent_Identity=29.8795180722892, Blast_Score=169, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17507503, Length=409, Percent_Identity=27.1393643031785, Blast_Score=157, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI86562256, Length=197, Percent_Identity=38.0710659898477, Blast_Score=131, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6321318, Length=644, Percent_Identity=37.5776397515528, Blast_Score=437, Evalue=1e-123,
Organism=Saccharomyces cerevisiae, GI6320850, Length=668, Percent_Identity=34.7305389221557, Blast_Score=425, Evalue=1e-119,
Organism=Saccharomyces cerevisiae, GI6322939, Length=658, Percent_Identity=37.0820668693009, Blast_Score=368, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6322772, Length=656, Percent_Identity=34.2987804878049, Blast_Score=348, Evalue=4e-96,
Organism=Saccharomyces cerevisiae, GI6324338, Length=665, Percent_Identity=34.5864661654135, Blast_Score=347, Evalue=1e-95,
Organism=Saccharomyces cerevisiae, GI6323451, Length=592, Percent_Identity=28.7162162162162, Blast_Score=236, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.0138248847926, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=36.2363919129082, Blast_Score=429, Evalue=1e-120,
Organism=Drosophila melanogaster, GI19921526, Length=718, Percent_Identity=36.3509749303621, Blast_Score=425, Evalue=1e-118,
Organism=Drosophila melanogaster, GI20129977, Length=664, Percent_Identity=36.5963855421687, Blast_Score=421, Evalue=1e-117,
Organism=Drosophila melanogaster, GI18859729, Length=653, Percent_Identity=37.2128637059724, Blast_Score=392, Evalue=1e-109,
Organism=Drosophila melanogaster, GI19920696, Length=649, Percent_Identity=34.9768875192604, Blast_Score=354, Evalue=2e-97,
Organism=Drosophila melanogaster, GI45550174, Length=633, Percent_Identity=33.4913112164297, Blast_Score=345, Evalue=8e-95,
Organism=Drosophila melanogaster, GI24643238, Length=563, Percent_Identity=33.5701598579041, Blast_Score=323, Evalue=7e-88,
Organism=Drosophila melanogaster, GI24585491, Length=605, Percent_Identity=32.396694214876, Blast_Score=287, Evalue=4e-77,
Organism=Drosophila melanogaster, GI17136342, Length=560, Percent_Identity=32.8571428571429, Blast_Score=246, Evalue=8e-65,
Organism=Drosophila melanogaster, GI24585920, Length=526, Percent_Identity=33.8403041825095, Blast_Score=243, Evalue=9e-64,
Organism=Drosophila melanogaster, GI24641942, Length=498, Percent_Identity=31.7269076305221, Blast_Score=232, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24642763, Length=668, Percent_Identity=27.2455089820359, Blast_Score=226, Evalue=8e-59,
Organism=Drosophila melanogaster, GI17136508, Length=539, Percent_Identity=31.5398886827458, Blast_Score=223, Evalue=5e-58,
Organism=Drosophila melanogaster, GI17136242, Length=245, Percent_Identity=37.9591836734694, Blast_Score=157, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24641139, Length=344, Percent_Identity=29.6511627906977, Blast_Score=144, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 147259; Mature: 147259

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRDRFRLSKRIQGASRIKKEESRHAVFDEIALDIAQSMQTANNRETDRPTISYPEQLPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SQKKDEIAEAIKNNQVVIVAGETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVA
CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DRIAEEMETELGSHVGYKVRFNDQVSDRTQVKLMTDGILLAEIQNDRYLNQYDTLIIDEA
HHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCHHCCEEEECH
HERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHFNNAPMIEVSGRTYPVETR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEECCCCC
YRPIVEDGDDTDRDQLEGIFDAVDELCEEGLGDILIFMTGEREIRDTAEALEKRNLRDTE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC
IVPLYARLSAQEQNRVFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
EEEHHHHHCCHHHCCCCCCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEAISQASANQRKGRCGRVSEGICIRLYSEEDFISRPEFTDPEILRTNLASVILQ
HHHCCHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIQAFPFVEAPDNRNIQDGIKLLEELGAINSNAKDPKKSLTKVGRELARLPID
HHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PRLARMVLEAPKYNALQEVMIIAAALSIQDPRERPSDKKQQSDDKHKRFNHEDSDFLTFV
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCCCCHHHHHH
NVWEHVKAKQKELSSNQFRKQCRKDFLNYLRVREWQDVHYQLSQVMKELNYKVNQEAAGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPASGLFKKQPKWVMVAELVETSKL
CHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
WGRIVAKIQPEWIEPLAGHLIKRSYSEPHWSKKSAAVMAYEKVTIYGIPIVPKRQINYGA
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
IDAPVCREIFIRSALVEGDWHTKHQFFKQNRKLLQEVEELEHKSRRRDILVDDDQLAEFY
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHH
DQRVGVDVVSGRHFDTWWKKAQKETPELLNFEKEMLFRGDASHVTDLDYPNFWHQGNLKL
HHHCCCEEECCCCHHHHHHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
KLSYQFEPGQDSDGVTVHVPLPILNQVEPYGFDWQIPGLRHELVMALIKSLPKTVRKNFV
EEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PAPNYADAFLSRAVPFEAPLLDSLEKELRRMTGFEVFRDDWKLEQIPDHLKVTYRVVDHR
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCC
NRKLKESRDLYELKEGLKDKVQETLSQVADDDIEQKGLKTWSFGELPTLYKQKRGGFEVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHCCCCEEE
AYPAIVDGKDSVEIKLFETEEEQHNAMKAGQRRLILLNVPSPIKYLHDNLPNKSKLGLYF
ECCEEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCHHH
NQYGRVMDLIDDCIACGIDKLIDEQGGLVWQPEAFEKMKEHIRAELGDTVVEIAKQVETI
HHHHHHHHHHHHHHHHCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTAFQIQKKLKGRVDLSMAFALSDIKAQIENLIFKGFATECGWKRLQDIHRYMKAIERR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKLPIDPNRDRMHLLKVEGITSDYKELLNKIPKGQPIPDKVKEIRWMIEELRVSYFAQQ
HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGTPYPVSDKRVKNAIADC
CCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MMRDRFRLSKRIQGASRIKKEESRHAVFDEIALDIAQSMQTANNRETDRPTISYPEQLPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SQKKDEIAEAIKNNQVVIVAGETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVA
CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DRIAEEMETELGSHVGYKVRFNDQVSDRTQVKLMTDGILLAEIQNDRYLNQYDTLIIDEA
HHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCHHCCEEEECH
HERSLNIDFIMGYLRELLPKRPDLKVIITSATIDPERFSKHFNNAPMIEVSGRTYPVETR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEECCCCC
YRPIVEDGDDTDRDQLEGIFDAVDELCEEGLGDILIFMTGEREIRDTAEALEKRNLRDTE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC
IVPLYARLSAQEQNRVFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
EEEHHHHHCCHHHCCCCCCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEAISQASANQRKGRCGRVSEGICIRLYSEEDFISRPEFTDPEILRTNLASVILQ
HHHCCHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIQAFPFVEAPDNRNIQDGIKLLEELGAINSNAKDPKKSLTKVGRELARLPID
HHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PRLARMVLEAPKYNALQEVMIIAAALSIQDPRERPSDKKQQSDDKHKRFNHEDSDFLTFV
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCCCCHHHHHH
NVWEHVKAKQKELSSNQFRKQCRKDFLNYLRVREWQDVHYQLSQVMKELNYKVNQEAAGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPASGLFKKQPKWVMVAELVETSKL
CHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
WGRIVAKIQPEWIEPLAGHLIKRSYSEPHWSKKSAAVMAYEKVTIYGIPIVPKRQINYGA
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
IDAPVCREIFIRSALVEGDWHTKHQFFKQNRKLLQEVEELEHKSRRRDILVDDDQLAEFY
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHH
DQRVGVDVVSGRHFDTWWKKAQKETPELLNFEKEMLFRGDASHVTDLDYPNFWHQGNLKL
HHHCCCEEECCCCHHHHHHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
KLSYQFEPGQDSDGVTVHVPLPILNQVEPYGFDWQIPGLRHELVMALIKSLPKTVRKNFV
EEEEEECCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PAPNYADAFLSRAVPFEAPLLDSLEKELRRMTGFEVFRDDWKLEQIPDHLKVTYRVVDHR
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCC
NRKLKESRDLYELKEGLKDKVQETLSQVADDDIEQKGLKTWSFGELPTLYKQKRGGFEVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHCCCCEEE
AYPAIVDGKDSVEIKLFETEEEQHNAMKAGQRRLILLNVPSPIKYLHDNLPNKSKLGLYF
ECCEEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCHHH
NQYGRVMDLIDDCIACGIDKLIDEQGGLVWQPEAFEKMKEHIRAELGDTVVEIAKQVETI
HHHHHHHHHHHHHHHHCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTAFQIQKKLKGRVDLSMAFALSDIKAQIENLIFKGFATECGWKRLQDIHRYMKAIERR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKLPIDPNRDRMHLLKVEGITSDYKELLNKIPKGQPIPDKVKEIRWMIEELRVSYFAQQ
HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGTPYPVSDKRVKNAIADC
CCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]