| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712068
Identifier: 59712068
GI number: 59712068
Start: 1617191
End: 1619206
Strand: Reverse
Name: 59712068
Synonym: VF_1461
Alternate gene names: NA
Gene position: 1619206-1617191 (Counterclockwise)
Preceding gene: 59712069
Following gene: 59712067
Centisome position: 55.88
GC content: 33.53
Gene sequence:
>2016_bases ATGAATACACTTATTCATGAAATTGGGGTTATTGATAAACAAGGTAAAAAACACCCTGTTAATTTTAAGGTTGGGCTTAA CGTTGTTACAGGTAAATCCTCTACAGGTAAAAGTGCTTTAATTGAAATTTTTGATTATTGTTTTGGTAGTGGCGAAAATA CAATCCCCAAAGGGATTATTACAACTAAAGCTGCTATTTATTATGTTGCACTTGCAGTTAACGGGCAGGATATGATAATT GCTCGTGATCCTGTTATTGCGTCGAAAGGTTTTTTTCGTCGTGTTGAAGCATTTGATTCTAAAGATATTGACCAAGACTA TTTTAATACTAGTTATTTTCGACCACTGAGTGAGTTTAAAAAGCATTTAAGAACGTTTTTCTTAGATATCGATGATGTCG ATGAATCTTTAGTTGCTCGATTTAATCGGAAATTTAACCAAAAATCTCCAACTCCATCGGTGCGTAGTTTTTCATCGTTT ATTCTTCAACATCAAAATCTTATTGCTAACAAACATGCGTTATTTTATCGATTTGATGAGAAAGAAAAGCGAGATCAGGC TATTGAACACACAAAGATTTTTTTAGGTCTTGTTGATCAAAAATTCTTTCATTTATCACAAGAAAAAGAACGAATTGCGT CAGAAGTTAGGCGTTTAGAGCGCCAAAAAGAAACAAATAAGCGTACATCAGAAAATTATAAACAAAAAGTCAGTCCGGTA TTGAGACAGATGTATGCTTTGATGGGGTTTAAATATGAACCATTATCATTAGATAAAATACTTCATCATCCACAAGATGC GAAAGAGCGGCTTGATGGAATTATAGTTCCTGAGAAAATTAATTATAATTCGGATGCGTCTGCACAACTATACAATCAGT TAACTCTTACAAGAAATCAAAAAAATGCTGAATTGCGGAAGTTGCAGCGTCAAGTATCGTCAATTAATAAGCACATTCAA GAAGAAGAACTTTTTGTCGATAATGTAAAACAATTTAGTTCACCTAAGCATGCACATATTTCGACTTCGGTTTGTCCATT TTGTCATACTAAAAAAGACAGTTTACGACAAAGCGCAGAAAGACTACAACAGGCTATCACGAAGATATCGGGTAATCTTG CTCAAGCTCGTCCAATGAAGGCAAAGTTTGAATCTTCATTAGTCGATGTACAGCGTCATATTGATGTTGTCAGTAAGGAT TTAACAGAACTAAATCAACAAATAATAAATATCGAGAAAACAAATAAACAAATAGCGGAACAAAAGACTCTGTATGAAAG CATCATAATACAAAAGGCAAAGTTATTCGCAATTATTGACACTCTTAATATGGCCGACGATGTTGAGCTTGAAAAGGAGA TCAAAAAGATTGGTGGACAGCTCAAGAAAATTAATGAAGCTCTGAAAAAATATGATGTGCAAAAAGGTTTAGAACGTGCA TCAGCTAAGGTAAACGAATATATGATTGAAATTGGTAGGCATTTTGCGTTTGAAGCGAGCTATAAACCTATCAACCTTCA TTTTTCATTTGAAACATTTGATCTTTATCATTTAACGACCGAGAATGAAAAAATCTACTTACGATCAATGGGAAGTGGTG CAAATTGGTTATATTGTCACATAACTTTATTTTTGGCATTACATAAGTATTTTGTTGAATTGGGTGATAAATGTTCTATT CCTTCGATATTGTTTCTGGATCAACCGACACAAGTATATTTCCCAGATTTCTCTCGTGATAACTCTAATAGTTTCGAAGA GCAAAAAAGTAAGGAAGAAAATCAAAGAACAAATAAAGATAGACCTATTGATGAAGACATAAAAGCTGTTGAAAACTTAT TTAGTCAACTCTCAATTTACTGTAATGAATTAAAAAGAAATTACGGCTTTAGCCCGCAAATTATAGTAACAGATCATGCA GATAATTTGGCATTATCCAATGATGAGCCATTTGATTCGCTAGTTAATAATAACAGATGGCGAACCCGTGGCTTGATTCA CCCTGTTGAAGAATGA
Upstream 100 bases:
>100_bases ATGTAGCTTTTATCTATCAAAAAAGTGCAGAAAAGTTAGGGCGATTATTTTGTGGGCACTCAGTGGTTGAGGTTTATGCA TTTTTAGGAGTAAAACCACG
Downstream 100 bases:
>100_bases TTCTGGGTAGTAATGTGAGTTGAGTCAATGAGATTTATACTGATTTATTTTTGTTGAGGTTAGCAAATATTGTTCAAACA TTATTTATAATCAAATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MNTLIHEIGVIDKQGKKHPVNFKVGLNVVTGKSSTGKSALIEIFDYCFGSGENTIPKGIITTKAAIYYVALAVNGQDMII ARDPVIASKGFFRRVEAFDSKDIDQDYFNTSYFRPLSEFKKHLRTFFLDIDDVDESLVARFNRKFNQKSPTPSVRSFSSF ILQHQNLIANKHALFYRFDEKEKRDQAIEHTKIFLGLVDQKFFHLSQEKERIASEVRRLERQKETNKRTSENYKQKVSPV LRQMYALMGFKYEPLSLDKILHHPQDAKERLDGIIVPEKINYNSDASAQLYNQLTLTRNQKNAELRKLQRQVSSINKHIQ EEELFVDNVKQFSSPKHAHISTSVCPFCHTKKDSLRQSAERLQQAITKISGNLAQARPMKAKFESSLVDVQRHIDVVSKD LTELNQQIINIEKTNKQIAEQKTLYESIIIQKAKLFAIIDTLNMADDVELEKEIKKIGGQLKKINEALKKYDVQKGLERA SAKVNEYMIEIGRHFAFEASYKPINLHFSFETFDLYHLTTENEKIYLRSMGSGANWLYCHITLFLALHKYFVELGDKCSI PSILFLDQPTQVYFPDFSRDNSNSFEEQKSKEENQRTNKDRPIDEDIKAVENLFSQLSIYCNELKRNYGFSPQIIVTDHA DNLALSNDEPFDSLVNNNRWRTRGLIHPVEE
Sequences:
>Translated_671_residues MNTLIHEIGVIDKQGKKHPVNFKVGLNVVTGKSSTGKSALIEIFDYCFGSGENTIPKGIITTKAAIYYVALAVNGQDMII ARDPVIASKGFFRRVEAFDSKDIDQDYFNTSYFRPLSEFKKHLRTFFLDIDDVDESLVARFNRKFNQKSPTPSVRSFSSF ILQHQNLIANKHALFYRFDEKEKRDQAIEHTKIFLGLVDQKFFHLSQEKERIASEVRRLERQKETNKRTSENYKQKVSPV LRQMYALMGFKYEPLSLDKILHHPQDAKERLDGIIVPEKINYNSDASAQLYNQLTLTRNQKNAELRKLQRQVSSINKHIQ EEELFVDNVKQFSSPKHAHISTSVCPFCHTKKDSLRQSAERLQQAITKISGNLAQARPMKAKFESSLVDVQRHIDVVSKD LTELNQQIINIEKTNKQIAEQKTLYESIIIQKAKLFAIIDTLNMADDVELEKEIKKIGGQLKKINEALKKYDVQKGLERA SAKVNEYMIEIGRHFAFEASYKPINLHFSFETFDLYHLTTENEKIYLRSMGSGANWLYCHITLFLALHKYFVELGDKCSI PSILFLDQPTQVYFPDFSRDNSNSFEEQKSKEENQRTNKDRPIDEDIKAVENLFSQLSIYCNELKRNYGFSPQIIVTDHA DNLALSNDEPFDSLVNNNRWRTRGLIHPVEE >Mature_671_residues MNTLIHEIGVIDKQGKKHPVNFKVGLNVVTGKSSTGKSALIEIFDYCFGSGENTIPKGIITTKAAIYYVALAVNGQDMII ARDPVIASKGFFRRVEAFDSKDIDQDYFNTSYFRPLSEFKKHLRTFFLDIDDVDESLVARFNRKFNQKSPTPSVRSFSSF ILQHQNLIANKHALFYRFDEKEKRDQAIEHTKIFLGLVDQKFFHLSQEKERIASEVRRLERQKETNKRTSENYKQKVSPV LRQMYALMGFKYEPLSLDKILHHPQDAKERLDGIIVPEKINYNSDASAQLYNQLTLTRNQKNAELRKLQRQVSSINKHIQ EEELFVDNVKQFSSPKHAHISTSVCPFCHTKKDSLRQSAERLQQAITKISGNLAQARPMKAKFESSLVDVQRHIDVVSKD LTELNQQIINIEKTNKQIAEQKTLYESIIIQKAKLFAIIDTLNMADDVELEKEIKKIGGQLKKINEALKKYDVQKGLERA SAKVNEYMIEIGRHFAFEASYKPINLHFSFETFDLYHLTTENEKIYLRSMGSGANWLYCHITLFLALHKYFVELGDKCSI PSILFLDQPTQVYFPDFSRDNSNSFEEQKSKEENQRTNKDRPIDEDIKAVENLFSQLSIYCNELKRNYGFSPQIIVTDHA DNLALSNDEPFDSLVNNNRWRTRGLIHPVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77663; Mature: 77663
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLIHEIGVIDKQGKKHPVNFKVGLNVVTGKSSTGKSALIEIFDYCFGSGENTIPKGII CCCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHH TTKAAIYYVALAVNGQDMIIARDPVIASKGFFRRVEAFDSKDIDQDYFNTSYFRPLSEFK HHHHEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHCHHHHHH KHLRTFFLDIDDVDESLVARFNRKFNQKSPTPSVRSFSSFILQHQNLIANKHALFYRFDE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC KEKRDQAIEHTKIFLGLVDQKFFHLSQEKERIASEVRRLERQKETNKRTSENYKQKVSPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQMYALMGFKYEPLSLDKILHHPQDAKERLDGIIVPEKINYNSDASAQLYNQLTLTRNQ HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHCCC KNAELRKLQRQVSSINKHIQEEELFVDNVKQFSSPKHAHISTSVCPFCHTKKDSLRQSAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLQQAITKISGNLAQARPMKAKFESSLVDVQRHIDVVSKDLTELNQQIINIEKTNKQIAE HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKTLYESIIIQKAKLFAIIDTLNMADDVELEKEIKKIGGQLKKINEALKKYDVQKGLERA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAKVNEYMIEIGRHFAFEASYKPINLHFSFETFDLYHLTTENEKIYLRSMGSGANWLYCH HHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHH ITLFLALHKYFVELGDKCSIPSILFLDQPTQVYFPDFSRDNSNSFEEQKSKEENQRTNKD HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC RPIDEDIKAVENLFSQLSIYCNELKRNYGFSPQIIVTDHADNLALSNDEPFDSLVNNNRW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCE RTRGLIHPVEE EECCCCCCCCC >Mature Secondary Structure MNTLIHEIGVIDKQGKKHPVNFKVGLNVVTGKSSTGKSALIEIFDYCFGSGENTIPKGII CCCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHH TTKAAIYYVALAVNGQDMIIARDPVIASKGFFRRVEAFDSKDIDQDYFNTSYFRPLSEFK HHHHEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHCHHHHHH KHLRTFFLDIDDVDESLVARFNRKFNQKSPTPSVRSFSSFILQHQNLIANKHALFYRFDE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC KEKRDQAIEHTKIFLGLVDQKFFHLSQEKERIASEVRRLERQKETNKRTSENYKQKVSPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQMYALMGFKYEPLSLDKILHHPQDAKERLDGIIVPEKINYNSDASAQLYNQLTLTRNQ HHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHCCC KNAELRKLQRQVSSINKHIQEEELFVDNVKQFSSPKHAHISTSVCPFCHTKKDSLRQSAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLQQAITKISGNLAQARPMKAKFESSLVDVQRHIDVVSKDLTELNQQIINIEKTNKQIAE HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKTLYESIIIQKAKLFAIIDTLNMADDVELEKEIKKIGGQLKKINEALKKYDVQKGLERA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAKVNEYMIEIGRHFAFEASYKPINLHFSFETFDLYHLTTENEKIYLRSMGSGANWLYCH HHHHHHHHHHHHHHHEEECCCCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHH ITLFLALHKYFVELGDKCSIPSILFLDQPTQVYFPDFSRDNSNSFEEQKSKEENQRTNKD HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC RPIDEDIKAVENLFSQLSIYCNELKRNYGFSPQIIVTDHADNLALSNDEPFDSLVNNNRW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCE RTRGLIHPVEE EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA