Click here to switch to the map view.

The map label for this gene is 59712036

Identifier: 59712036

GI number: 59712036

Start: 1583870

End: 1584775

Strand: Direct

Name: 59712036

Synonym: VF_1429

Alternate gene names: NA

Gene position: 1583870-1584775 (Clockwise)

Preceding gene: 59712035

Following gene: 59712037

Centisome position: 54.66

GC content: 33.77

Gene sequence:

>906_bases
ATGCAGACAAATGCAGACTTTACATTTGATGAGTTCAGTGAAAAATTATGGTCAATATTTCATGGACAAGCATTGATCAC
AAAATTTAGTTTTCCATTAAATGACGCCTGTTTCACGTTTAAATCTCTAAAACGAAATAATGTAAATTTTTACCTATTTG
AAAGCCCTGATCCATTATCTTTATTCAGTTTTCACCTTCCTTCTACATCACAGCCAAAAACATTGTTATTACTCGATGTA
GATAATGCTGGAATGCTTTTCAATGGAATTCTATGTGAGGAGCATCAATTTGCGTTAATTTCAGAAAAAAGCCAGCAACC
ATTTTGTTTACAAATACCAGCTCACAGCCCTATTTTAGTATGTGATATCAATACCGATAACAAACAGTTTCATCAACTTT
GCGGTAGTTTAGTACCTGTTGGGATTGATATAAAATACGCAGAAGAATTAAAAATTGCCGTTCGTAATGCAAATAATATG
TTTCCAAATAATCATTCCAATGTAGGTGCAACCTTATTGATGCATATTGTTGAGCTTTTATCTTTACATCCAATTCCAAT
GCGTCGCCAAGCATTAATGGGAAGAAGTCGTTTACCAAGACGCAATTTTATTCCTAAATGCATTGATTATATGATGGAGA
TGTCCTCAACTGAGGCAATTAAACAACTCTCCAAAGAACGAAATATTTCAGAAAAAACCATTAGAAATGCATTTAAAGAA
ACAACAGGGTTCACCCCTAAAGAGTTTGAACAAATCAGTAAACTTTTTGCATTTCGTCGGGCCTTAAAGCAACCAGATAT
TAAAACTGTTTTTGAAGCAGCTATTGCGAGTGATGTGTATCGCTGGTCTCGTTATGCTAGTCGTTATTTTAAGATTTTTA
ATGAGTTACCAATTCAAACTCTTTGA

Upstream 100 bases:

>100_bases
ACATGGAAAAAGTAGCTAACGCTAGTAAATAACATGAATAAGATTTAGGGCTCATATGGGCCCTATTTTGCTATTTATAA
GATACATAAAGGTGAAACCC

Downstream 100 bases:

>100_bases
GAAAGCTCTCAATTCACCTGAGTCACAAGCGTGAACAAATAAAGCAAAATACCTATAGATTCAATAAGATAAATAACAAG
ATAACTTTTGGTTATAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNFYLFESPDPLSLFSFHLPSTSQPKTLLLLDV
DNAGMLFNGILCEEHQFALISEKSQQPFCLQIPAHSPILVCDINTDNKQFHQLCGSLVPVGIDIKYAEELKIAVRNANNM
FPNNHSNVGATLLMHIVELLSLHPIPMRRQALMGRSRLPRRNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKE
TTGFTPKEFEQISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQTL

Sequences:

>Translated_301_residues
MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNFYLFESPDPLSLFSFHLPSTSQPKTLLLLDV
DNAGMLFNGILCEEHQFALISEKSQQPFCLQIPAHSPILVCDINTDNKQFHQLCGSLVPVGIDIKYAEELKIAVRNANNM
FPNNHSNVGATLLMHIVELLSLHPIPMRRQALMGRSRLPRRNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKE
TTGFTPKEFEQISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQTL
>Mature_301_residues
MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNFYLFESPDPLSLFSFHLPSTSQPKTLLLLDV
DNAGMLFNGILCEEHQFALISEKSQQPFCLQIPAHSPILVCDINTDNKQFHQLCGSLVPVGIDIKYAEELKIAVRNANNM
FPNNHSNVGATLLMHIVELLSLHPIPMRRQALMGRSRLPRRNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKE
TTGFTPKEFEQISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34705; Mature: 34705

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNFYLFESPDPLS
CCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
LFSFHLPSTSQPKTLLLLDVDNAGMLFNGILCEEHQFALISEKSQQPFCLQIPAHSPILV
EEEEECCCCCCCCEEEEEEECCCCCEEECEEECCCCEEEEECCCCCCEEEECCCCCCEEE
CDINTDNKQFHQLCGSLVPVGIDIKYAEELKIAVRNANNMFPNNHSNVGATLLMHIVELL
EEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
SLHPIPMRRQALMGRSRLPRRNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKE
HCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
TTGFTPKEFEQISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQT
HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
L
C
>Mature Secondary Structure
MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNFYLFESPDPLS
CCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
LFSFHLPSTSQPKTLLLLDVDNAGMLFNGILCEEHQFALISEKSQQPFCLQIPAHSPILV
EEEEECCCCCCCCEEEEEEECCCCCEEECEEECCCCEEEEECCCCCCEEEECCCCCCEEE
CDINTDNKQFHQLCGSLVPVGIDIKYAEELKIAVRNANNMFPNNHSNVGATLLMHIVELL
EEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
SLHPIPMRRQALMGRSRLPRRNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKE
HCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
TTGFTPKEFEQISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQT
HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA