| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is aslA [H]
Identifier: 59712037
GI number: 59712037
Start: 1584956
End: 1586527
Strand: Direct
Name: aslA [H]
Synonym: VF_1430
Alternate gene names: 59712037
Gene position: 1584956-1586527 (Clockwise)
Preceding gene: 59712036
Following gene: 59712039
Centisome position: 54.7
GC content: 41.92
Gene sequence:
>1572_bases ATGGGTAATCATTTAAGTAAGATTGCTGTTGGAGTTGGTCTGCTTGCAACCTCTAGTGCAGCAATGGCAGCAGCGCAACC TAACATACTTGCTATTTTTGGTGATGATGTTGGTTATTGGAACATTAGCGCCTACAACCAAGGAATGATGGGTTATAAAA CACCTAACATCGATCGTATCGCGAATGAAGGTGCATTGTTCACTGATCACTATGGCCAACAATCTTGTACTGCTGGACGT GCTGCTTTCATTACAGGTCAAGAACCTTTCCGTACGGGTCTATTAACCATTGGCATGCCAGGTTCTGATCATGGTATTCC TGATTGGGCTCCAACCATTGCCGATCTTCTTAAAGATCAAGGCTACATGACGGCACAATTTGGTAAAAACCACCTTGGTG ACCAAGATAAACATCTTCCAACCAATCACGGTTTTGACGAATTCTTCGGTAACCTTTACCACCTAAATGCCGAAGAAGAG CCAGAAACTTACTACTACCCTAAAGATCCTGAGTTCCGTAAAAATTATGGTCCACGTGGTGTAATTAAATCTTATGCTGA TGGTAAGATTGAAGATACCGGCCCAATGACTCGTAAGCGTATGGAGCACGCAGATGAAGAGTTCTTAGATTCTTCATTAG CATTTATGGAAAAAGCGGTAAAAGCGGATAAACCTTTCTTTATCTGGCACAACACAACTCGCATGCACGTTTGGACTCGT CTACAAGAAAAATACCAAGGTAAATCAGGCGTAAGTATTTATGCTGATGGTATGCTTGAGCACGATGACCAAGTTGGTAT CCTACTTGATAAACTGGATGAGCTTGGTGTAGCAGATAACACGATCGTTATTTATTCAACCGATAACGGTGCAGAAACAG TAACATGGCCTGACGGCGGTGCTACACCATTCTATGGTGAAAAAGGCACAACATGGGAAGGTGGTATGCGTGTACCACAA CTTGTTCGTTGGCCGGGAACTATTAAACCTGGAACAAAAATCAATGAAATGATGGCGCACCAAGATTGGCTTCCAACTTT ACTTGATGCTGCTGGTGTTCCAAACGTAAAAGAAAAACTTGCTAAAGGCTATAAAGCCAACGGTAAAGAGTTCAAAGTTC ATATCGATGGTTACGATTTCAAACCATTCTTTGAAGGAAAAGTAGATAAAGGTCCTCGTGAATCACTGCTTTACTTCACT GCAAATGGTGAGTTGAATGCCGTTCGCTGGCAAGATTGGAAACTGAACTTCGCAATAATGGAAGGTAATATTTCTGATGC AGTTCGTTTGTCACCAAACTGGCCTCAAATCATCCACCTACGTGCGGACCCATTTGAAAAAGCACCGCATGAATCAGGCA TGTACTTACGTTGGATGGCAGATAACATGTGGTTATTCGTACCAATGCAAGACGTATTAGCTGAGTTCTTTAATACTCTA CCTGATTACCCAATGCAAATGAGTACTCAAATGAACCCTGCAGCTATCAGTGCACAATCACTTGGCTTAAAAGCGAAAAT GCAACAGCTAGATAAGCTTCAAGCTCAAATGAATAAACTAAATGCTAAATAG
Upstream 100 bases:
>100_bases ATAACTTTTGGTTATAAAGTCTATAAAGCGACGATTTAAAAATATTTATTTATGATCTCCGCGAATTAAACACGACTATA ACTATTATTTGGAGTTATTT
Downstream 100 bases:
>100_bases TAATATCTAAAACTAAAACGCCCCGAGTGAATATTCACTCGGGGCGTTTTTTTATCTGGAATCTAGCGACGCTGACAAGT TGTGCAACCACGACACGCCG
Product: sulfatase family protein
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MGNHLSKIAVGVGLLATSSAAMAAAQPNILAIFGDDVGYWNISAYNQGMMGYKTPNIDRIANEGALFTDHYGQQSCTAGR AAFITGQEPFRTGLLTIGMPGSDHGIPDWAPTIADLLKDQGYMTAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEE PETYYYPKDPEFRKNYGPRGVIKSYADGKIEDTGPMTRKRMEHADEEFLDSSLAFMEKAVKADKPFFIWHNTTRMHVWTR LQEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYSTDNGAETVTWPDGGATPFYGEKGTTWEGGMRVPQ LVRWPGTIKPGTKINEMMAHQDWLPTLLDAAGVPNVKEKLAKGYKANGKEFKVHIDGYDFKPFFEGKVDKGPRESLLYFT ANGELNAVRWQDWKLNFAIMEGNISDAVRLSPNWPQIIHLRADPFEKAPHESGMYLRWMADNMWLFVPMQDVLAEFFNTL PDYPMQMSTQMNPAAISAQSLGLKAKMQQLDKLQAQMNKLNAK
Sequences:
>Translated_523_residues MGNHLSKIAVGVGLLATSSAAMAAAQPNILAIFGDDVGYWNISAYNQGMMGYKTPNIDRIANEGALFTDHYGQQSCTAGR AAFITGQEPFRTGLLTIGMPGSDHGIPDWAPTIADLLKDQGYMTAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEE PETYYYPKDPEFRKNYGPRGVIKSYADGKIEDTGPMTRKRMEHADEEFLDSSLAFMEKAVKADKPFFIWHNTTRMHVWTR LQEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYSTDNGAETVTWPDGGATPFYGEKGTTWEGGMRVPQ LVRWPGTIKPGTKINEMMAHQDWLPTLLDAAGVPNVKEKLAKGYKANGKEFKVHIDGYDFKPFFEGKVDKGPRESLLYFT ANGELNAVRWQDWKLNFAIMEGNISDAVRLSPNWPQIIHLRADPFEKAPHESGMYLRWMADNMWLFVPMQDVLAEFFNTL PDYPMQMSTQMNPAAISAQSLGLKAKMQQLDKLQAQMNKLNAK >Mature_522_residues GNHLSKIAVGVGLLATSSAAMAAAQPNILAIFGDDVGYWNISAYNQGMMGYKTPNIDRIANEGALFTDHYGQQSCTAGRA AFITGQEPFRTGLLTIGMPGSDHGIPDWAPTIADLLKDQGYMTAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEP ETYYYPKDPEFRKNYGPRGVIKSYADGKIEDTGPMTRKRMEHADEEFLDSSLAFMEKAVKADKPFFIWHNTTRMHVWTRL QEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYSTDNGAETVTWPDGGATPFYGEKGTTWEGGMRVPQL VRWPGTIKPGTKINEMMAHQDWLPTLLDAAGVPNVKEKLAKGYKANGKEFKVHIDGYDFKPFFEGKVDKGPRESLLYFTA NGELNAVRWQDWKLNFAIMEGNISDAVRLSPNWPQIIHLRADPFEKAPHESGMYLRWMADNMWLFVPMQDVLAEFFNTLP DYPMQMSTQMNPAAISAQSLGLKAKMQQLDKLQAQMNKLNAK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI146229331, Length=401, Percent_Identity=32.4189526184539, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI146229329, Length=401, Percent_Identity=32.4189526184539, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI6005990, Length=401, Percent_Identity=32.4189526184539, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI146229324, Length=401, Percent_Identity=32.4189526184539, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4503899, Length=479, Percent_Identity=29.6450939457203, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI45430057, Length=457, Percent_Identity=27.3522975929978, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI58743319, Length=454, Percent_Identity=28.8546255506608, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI146229327, Length=327, Percent_Identity=29.9694189602446, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI38569407, Length=390, Percent_Identity=31.025641025641, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI38569405, Length=390, Percent_Identity=31.025641025641, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI109389362, Length=422, Percent_Identity=27.7251184834123, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI53831991, Length=293, Percent_Identity=29.6928327645051, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI157266309, Length=163, Percent_Identity=38.6503067484663, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI59797060, Length=412, Percent_Identity=26.6990291262136, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI71852586, Length=151, Percent_Identity=35.7615894039735, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI71852584, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI31742482, Length=164, Percent_Identity=36.5853658536585, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1790233, Length=414, Percent_Identity=34.7826086956522, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI87081924, Length=426, Percent_Identity=23.7089201877934, Blast_Score=96, Evalue=7e-21, Organism=Caenorhabditis elegans, GI115533416, Length=443, Percent_Identity=26.1851015801354, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115533418, Length=432, Percent_Identity=25.6944444444444, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17559078, Length=283, Percent_Identity=28.2685512367491, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24666109, Length=419, Percent_Identity=28.1622911694511, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24666175, Length=403, Percent_Identity=26.5508684863524, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI281366397, Length=413, Percent_Identity=26.8765133171913, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281366395, Length=413, Percent_Identity=26.8765133171913, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24666163, Length=413, Percent_Identity=26.8765133171913, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281363223, Length=145, Percent_Identity=29.6551724137931, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 58618; Mature: 58487
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNHLSKIAVGVGLLATSSAAMAAAQPNILAIFGDDVGYWNISAYNQGMMGYKTPNIDRI CCCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHH ANEGALFTDHYGQQSCTAGRAAFITGQEPFRTGLLTIGMPGSDHGIPDWAPTIADLLKDQ HCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC GYMTAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEPETYYYPKDPEFRKNYGPRG CCEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCEEECCCCCCHHHCCCCCH VIKSYADGKIEDTGPMTRKRMEHADEEFLDSSLAFMEKAVKADKPFFIWHNTTRMHVWTR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHH LQEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYSTDNGAETVTWPDGG HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCC ATPFYGEKGTTWEGGMRVPQLVRWPGTIKPGTKINEMMAHQDWLPTLLDAAGVPNVKEKL CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH AKGYKANGKEFKVHIDGYDFKPFFEGKVDKGPRESLLYFTANGELNAVRWQDWKLNFAIM HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECEEEEEEEE EGNISDAVRLSPNWPQIIHLRADPFEKAPHESGMYLRWMADNMWLFVPMQDVLAEFFNTL ECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHC PDYPMQMSTQMNPAAISAQSLGLKAKMQQLDKLQAQMNKLNAK CCCCCCCCCCCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNHLSKIAVGVGLLATSSAAMAAAQPNILAIFGDDVGYWNISAYNQGMMGYKTPNIDRI CCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHH ANEGALFTDHYGQQSCTAGRAAFITGQEPFRTGLLTIGMPGSDHGIPDWAPTIADLLKDQ HCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC GYMTAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEPETYYYPKDPEFRKNYGPRG CCEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCEEECCCCCCHHHCCCCCH VIKSYADGKIEDTGPMTRKRMEHADEEFLDSSLAFMEKAVKADKPFFIWHNTTRMHVWTR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHH LQEKYQGKSGVSIYADGMLEHDDQVGILLDKLDELGVADNTIVIYSTDNGAETVTWPDGG HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCC ATPFYGEKGTTWEGGMRVPQLVRWPGTIKPGTKINEMMAHQDWLPTLLDAAGVPNVKEKL CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH AKGYKANGKEFKVHIDGYDFKPFFEGKVDKGPRESLLYFTANGELNAVRWQDWKLNFAIM HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECEEEEEEEE EGNISDAVRLSPNWPQIIHLRADPFEKAPHESGMYLRWMADNMWLFVPMQDVLAEFFNTL ECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHC PDYPMQMSTQMNPAAISAQSLGLKAKMQQLDKLQAQMNKLNAK CCCCCCCCCCCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]