Click here to switch to the map view.

The map label for this gene is 59711978

Identifier: 59711978

GI number: 59711978

Start: 1517692

End: 1518597

Strand: Reverse

Name: 59711978

Synonym: VF_1371

Alternate gene names: NA

Gene position: 1518597-1517692 (Counterclockwise)

Preceding gene: 59711979

Following gene: 59711977

Centisome position: 52.41

GC content: 39.07

Gene sequence:

>906_bases
ATGTTAGAATATATTTATCAAGCAACGGGTTTATTATTAATTGCCTTTTCGGTTCAAAGCTTTATGGATAAGGAAAATCC
AAAAGCAATTGGTACAGGTTTATTTTGGTTGGCATATGGTGTTTCTTTCTGTTTAGGAAGCATTTTACCTGATTGGTTTG
TCGGCGTTCTGGTGTTACTTATGACACTGATTGCTTCTGCGGGATTAATGGGGATTGGTTCTTATCATTCAAGTGATAAT
GAATTTAGAAAAGCCAGTGCGAAATCATTACAAAACATGCTATTTCTTCCTGCGATCATCGTTCCTGTCGGTACCATTTT
ATGGAGCCAAGTAACTGGTGAAAGTGCGCTTATTGGTTTAGGGATAAGCTCTGTTGCGGCTTTATTAGTTGCAAACGGAA
TGACTAAATGTCGACCTGTGCAAAGCATACATGAAGGTCGTCGTTTAATTGATACCATTGGTTGGGCGGCTATTTTGTCG
CAATTCTTAGCTGCACTTGGTTATCTGTTTGGTCAAGCGGGTGTTGGTGATACCGTTTCACAAATCGTAAAAGAAATTGT
GCCTCATGGTAGCGTTTTAGCTTACGTTATTGCTTATACATTCGGCATGGCTGTCTTCACCATTGTGATGGGTAATGCGT
TTGCTGCTTTTGCTGTTATCACTGCAGGTATTGGTATTCCACTACTTATGGTTGAAATGGGCGGTAACCCAGTGATCGTT
GGTGTACTTGGTATGGTTTCTGGTTATTGCGGAACATTAATGACACCGATGGCGGCCAATTTTAATGTTGTACCTGCCGC
ACTATTAGAGTTAGAGAATAAAAACCAAGTGATTATTACTCAGTTTATTCCTGGTTTTATCATGTTACTTATTAATACTA
CATTTATGTATCTGTTTGCGTTTTAG

Upstream 100 bases:

>100_bases
AATTCCAACCGCATTGGCATCATGTGTTGTGTTTTATGTTCGAGCATGGATAGAAGATTCGCGTTTGGCAAAAGCTGGTA
AGCAAGAGTAGGGATTCATC

Downstream 100 bases:

>100_bases
GGAATTAGGCAATGAAAAAGATTTTAATTACGGGTTTTGAACCATTTGGTAACGATAAAATCAATCCTGCATTGGAAGCG
GTTAAGTTAATTGCAGGGCG

Product: permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLEYIYQATGLLLIAFSVQSFMDKENPKAIGTGLFWLAYGVSFCLGSILPDWFVGVLVLLMTLIASAGLMGIGSYHSSDN
EFRKASAKSLQNMLFLPAIIVPVGTILWSQVTGESALIGLGISSVAALLVANGMTKCRPVQSIHEGRRLIDTIGWAAILS
QFLAALGYLFGQAGVGDTVSQIVKEIVPHGSVLAYVIAYTFGMAVFTIVMGNAFAAFAVITAGIGIPLLMVEMGGNPVIV
GVLGMVSGYCGTLMTPMAANFNVVPAALLELENKNQVIITQFIPGFIMLLINTTFMYLFAF

Sequences:

>Translated_301_residues
MLEYIYQATGLLLIAFSVQSFMDKENPKAIGTGLFWLAYGVSFCLGSILPDWFVGVLVLLMTLIASAGLMGIGSYHSSDN
EFRKASAKSLQNMLFLPAIIVPVGTILWSQVTGESALIGLGISSVAALLVANGMTKCRPVQSIHEGRRLIDTIGWAAILS
QFLAALGYLFGQAGVGDTVSQIVKEIVPHGSVLAYVIAYTFGMAVFTIVMGNAFAAFAVITAGIGIPLLMVEMGGNPVIV
GVLGMVSGYCGTLMTPMAANFNVVPAALLELENKNQVIITQFIPGFIMLLINTTFMYLFAF
>Mature_301_residues
MLEYIYQATGLLLIAFSVQSFMDKENPKAIGTGLFWLAYGVSFCLGSILPDWFVGVLVLLMTLIASAGLMGIGSYHSSDN
EFRKASAKSLQNMLFLPAIIVPVGTILWSQVTGESALIGLGISSVAALLVANGMTKCRPVQSIHEGRRLIDTIGWAAILS
QFLAALGYLFGQAGVGDTVSQIVKEIVPHGSVLAYVIAYTFGMAVFTIVMGNAFAAFAVITAGIGIPLLMVEMGGNPVIV
GVLGMVSGYCGTLMTPMAANFNVVPAALLELENKNQVIITQFIPGFIMLLINTTFMYLFAF

Specific function: Unknown

COG id: COG3817

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32014; Mature: 32014

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEYIYQATGLLLIAFSVQSFMDKENPKAIGTGLFWLAYGVSFCLGSILPDWFVGVLVLL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MTLIASAGLMGIGSYHSSDNEFRKASAKSLQNMLFLPAIIVPVGTILWSQVTGESALIGL
HHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
GISSVAALLVANGMTKCRPVQSIHEGRRLIDTIGWAAILSQFLAALGYLFGQAGVGDTVS
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QIVKEIVPHGSVLAYVIAYTFGMAVFTIVMGNAFAAFAVITAGIGIPLLMVEMGGNPVIV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEH
GVLGMVSGYCGTLMTPMAANFNVVPAALLELENKNQVIITQFIPGFIMLLINTTFMYLFA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MLEYIYQATGLLLIAFSVQSFMDKENPKAIGTGLFWLAYGVSFCLGSILPDWFVGVLVLL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MTLIASAGLMGIGSYHSSDNEFRKASAKSLQNMLFLPAIIVPVGTILWSQVTGESALIGL
HHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
GISSVAALLVANGMTKCRPVQSIHEGRRLIDTIGWAAILSQFLAALGYLFGQAGVGDTVS
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QIVKEIVPHGSVLAYVIAYTFGMAVFTIVMGNAFAAFAVITAGIGIPLLMVEMGGNPVIV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEH
GVLGMVSGYCGTLMTPMAANFNVVPAALLELENKNQVIITQFIPGFIMLLINTTFMYLFA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA