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The map label for this gene is 59711979

Identifier: 59711979

GI number: 59711979

Start: 1518607

End: 1519284

Strand: Reverse

Name: 59711979

Synonym: VF_1372

Alternate gene names: NA

Gene position: 1519284-1518607 (Counterclockwise)

Preceding gene: 59711980

Following gene: 59711978

Centisome position: 52.43

GC content: 40.56

Gene sequence:

>678_bases
ATGATTGATTTTTGGCCATTAATTGGTGTCTTAATCATCACAGTCGGTCTTGCATTACGCTTGAACACTTTATTAGTTAT
TTTAACCGCCGGTATTGTTACAGGTCTGGTTGCTAAGATTGATTTTATCGAGATTTTATCAATCCTCGGGGCTTCTTTTA
CGCAAAACCGCTATATGTCTTTATTCATTCTTGTTCTACCTATGATAGGGGTTCTAGAGCGTTTTGGATTAAGAGAAAGA
GCAGAAACCTTGATTGGTTCAATCAAGCAAGCATCAGCAGGTCGTGTGATGCTTACGTATCTATTATTACGTAAAGTGAC
GAATGCACTTGGTTTGAATCTGGGTGGTCACCCATCAATGATCCGTCCGCTGGTTGCTCCAATGGCAGAAGCTGCTGCAG
AAAAAGACAGAAAACCATTAACGAATAAAGAGAAGCAACATTTGCGTGCTTTAGCTGCAATGAGTGAAAACTTTGCTAAC
TTCTTTAGTCAGCTGATCTTTATTGGTGCAGGTGGTTTATTGCTTATCAAAGGCGTGTTGGAAGAACACGGTTACAGTGT
AGCGTTAAACGATATGTTTATGTGGGCAATTCCAACCGCATTGGCATCATGTGTTGTGTTTTATGTTCGAGCATGGATAG
AAGATTCGCGTTTGGCAAAAGCTGGTAAGCAAGAGTAG

Upstream 100 bases:

>100_bases
AAACGTTCTATAACGTTTTGGGGTTGTTTGGTTTTACCCATTTTAAAAAACTAACTGTATCTTGCTATGGGAGTAAAGAT
ACTATTTATAAGGATGTAAT

Downstream 100 bases:

>100_bases
GGATTCATCATGTTAGAATATATTTATCAAGCAACGGGTTTATTATTAATTGCCTTTTCGGTTCAAAGCTTTATGGATAA
GGAAAATCCAAAAGCAATTG

Product: permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIDFWPLIGVLIITVGLALRLNTLLVILTAGIVTGLVAKIDFIEILSILGASFTQNRYMSLFILVLPMIGVLERFGLRER
AETLIGSIKQASAGRVMLTYLLLRKVTNALGLNLGGHPSMIRPLVAPMAEAAAEKDRKPLTNKEKQHLRALAAMSENFAN
FFSQLIFIGAGGLLLIKGVLEEHGYSVALNDMFMWAIPTALASCVVFYVRAWIEDSRLAKAGKQE

Sequences:

>Translated_225_residues
MIDFWPLIGVLIITVGLALRLNTLLVILTAGIVTGLVAKIDFIEILSILGASFTQNRYMSLFILVLPMIGVLERFGLRER
AETLIGSIKQASAGRVMLTYLLLRKVTNALGLNLGGHPSMIRPLVAPMAEAAAEKDRKPLTNKEKQHLRALAAMSENFAN
FFSQLIFIGAGGLLLIKGVLEEHGYSVALNDMFMWAIPTALASCVVFYVRAWIEDSRLAKAGKQE
>Mature_225_residues
MIDFWPLIGVLIITVGLALRLNTLLVILTAGIVTGLVAKIDFIEILSILGASFTQNRYMSLFILVLPMIGVLERFGLRER
AETLIGSIKQASAGRVMLTYLLLRKVTNALGLNLGGHPSMIRPLVAPMAEAAAEKDRKPLTNKEKQHLRALAAMSENFAN
FFSQLIFIGAGGLLLIKGVLEEHGYSVALNDMFMWAIPTALASCVVFYVRAWIEDSRLAKAGKQE

Specific function: Unknown

COG id: COG3819

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24655; Mature: 24655

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFWPLIGVLIITVGLALRLNTLLVILTAGIVTGLVAKIDFIEILSILGASFTQNRYMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LFILVLPMIGVLERFGLRERAETLIGSIKQASAGRVMLTYLLLRKVTNALGLNLGGHPSM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
IRPLVAPMAEAAAEKDRKPLTNKEKQHLRALAAMSENFANFFSQLIFIGAGGLLLIKGVL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EEHGYSVALNDMFMWAIPTALASCVVFYVRAWIEDSRLAKAGKQE
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDFWPLIGVLIITVGLALRLNTLLVILTAGIVTGLVAKIDFIEILSILGASFTQNRYMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LFILVLPMIGVLERFGLRERAETLIGSIKQASAGRVMLTYLLLRKVTNALGLNLGGHPSM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
IRPLVAPMAEAAAEKDRKPLTNKEKQHLRALAAMSENFANFFSQLIFIGAGGLLLIKGVL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EEHGYSVALNDMFMWAIPTALASCVVFYVRAWIEDSRLAKAGKQE
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA