| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711955
Identifier: 59711955
GI number: 59711955
Start: 1490100
End: 1491131
Strand: Reverse
Name: 59711955
Synonym: VF_1348
Alternate gene names: NA
Gene position: 1491131-1490100 (Counterclockwise)
Preceding gene: 59711956
Following gene: 59711954
Centisome position: 51.46
GC content: 40.02
Gene sequence:
>1032_bases ATGAAATTACTGTATTGGTTAGATGAGTGGTTAACCAACTCACGTTCACAACAACAAGCGCGACTTCCGATGACGGGCAG CGATTTACTTGACGATGTGTTTGTTAAGTATGAGTTTGTTGATTTGGACAAGCCACTACTGTTTACGTTTTCTCCTGCGG GAACCAACTTAAAAGAGCAAGACCTTCATGAAGATTATGCGCCGTGGGGCTATCATTTAGCACGAAAACAAGACGTGAAT GTGATTTCATTTCAGCACCTGGGCCAAAGTAACTGGTTCCGTAGTCGAAACTTAATCTTCTTTTTAGAGCAATTATCTAC CTTGCTTGAACCATTTACTTATCGTTTAGGGTATGGATTAAGTCGTGGTGGATTCGCTATTGGTGCATTTGCTAATTTGT TGCAACTTGACCAAGTTTTGTTGTTTCATCCTGTTAGTACGAAAAACCAAAATATTGCGCCATGGGATGACAGATCAAGC ACTGAAATTGCACAGAAGTTTGATTGGGAAGGCGATTATCACGATCTTGATTTAGGAAAAGCGAAGGGCTATATCATTTA TGACCCAACAAACCGCATCGATCGTTTGCACGCTAAACGTTATCCTGAGCTGACGCATTTACGTGTGTTTGGTATGGGAC ATGGTACTCACGCTACTTATCTTAATAAATTCGGTTTTTATAAGCAGGTGGCGGTTGATTTTATGCGCCATCAAAAGGTT GATATTGCTCAATTTCGTCAGCAAACTAAAACGTTACGTTTTAAAGAAGATTATTACAAACGCCTTAATAAAGCGAACTC AAGCTCTGAGCACCGTCTGGGGTTATTGAGTAAAGCACATAATATTGTTATTGGTGAGAAAGAAGCGCACGTACAAGAGC ATCAAGCGCAGATAGATGTTCAGCCTTTAATTGATATCGCACTTAAGCACAAAGATGAGCATCCAAAAGATGCCATTCAG CTTTTAGAAATGGCGCAATTATTAGTGCCAGATGATCCATTAGTTGAGCATAAGCTAAAACAATTAGCGTAA
Upstream 100 bases:
>100_bases TATTAAAATCATTCCAGTTATAAATATTAGTGTTCAAACTAAATTTTCGTTCAGCGGTTATCTTTGATACAATCTCGCGC TTGTTTTAAAGGAGAGCTAA
Downstream 100 bases:
>100_bases AAGCCGTTTTAAATATTAACGCCTCATCTTGAATGGGGCGTTTTTGTATTTGCGGTTTAATGATCTTCATGAAGGCATTT CATTCTTTATATAGACCTAT
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKLLYWLDEWLTNSRSQQQARLPMTGSDLLDDVFVKYEFVDLDKPLLFTFSPAGTNLKEQDLHEDYAPWGYHLARKQDVN VISFQHLGQSNWFRSRNLIFFLEQLSTLLEPFTYRLGYGLSRGGFAIGAFANLLQLDQVLLFHPVSTKNQNIAPWDDRSS TEIAQKFDWEGDYHDLDLGKAKGYIIYDPTNRIDRLHAKRYPELTHLRVFGMGHGTHATYLNKFGFYKQVAVDFMRHQKV DIAQFRQQTKTLRFKEDYYKRLNKANSSSEHRLGLLSKAHNIVIGEKEAHVQEHQAQIDVQPLIDIALKHKDEHPKDAIQ LLEMAQLLVPDDPLVEHKLKQLA
Sequences:
>Translated_343_residues MKLLYWLDEWLTNSRSQQQARLPMTGSDLLDDVFVKYEFVDLDKPLLFTFSPAGTNLKEQDLHEDYAPWGYHLARKQDVN VISFQHLGQSNWFRSRNLIFFLEQLSTLLEPFTYRLGYGLSRGGFAIGAFANLLQLDQVLLFHPVSTKNQNIAPWDDRSS TEIAQKFDWEGDYHDLDLGKAKGYIIYDPTNRIDRLHAKRYPELTHLRVFGMGHGTHATYLNKFGFYKQVAVDFMRHQKV DIAQFRQQTKTLRFKEDYYKRLNKANSSSEHRLGLLSKAHNIVIGEKEAHVQEHQAQIDVQPLIDIALKHKDEHPKDAIQ LLEMAQLLVPDDPLVEHKLKQLA >Mature_343_residues MKLLYWLDEWLTNSRSQQQARLPMTGSDLLDDVFVKYEFVDLDKPLLFTFSPAGTNLKEQDLHEDYAPWGYHLARKQDVN VISFQHLGQSNWFRSRNLIFFLEQLSTLLEPFTYRLGYGLSRGGFAIGAFANLLQLDQVLLFHPVSTKNQNIAPWDDRSS TEIAQKFDWEGDYHDLDLGKAKGYIIYDPTNRIDRLHAKRYPELTHLRVFGMGHGTHATYLNKFGFYKQVAVDFMRHQKV DIAQFRQQTKTLRFKEDYYKRLNKANSSSEHRLGLLSKAHNIVIGEKEAHVQEHQAQIDVQPLIDIALKHKDEHPKDAIQ LLEMAQLLVPDDPLVEHKLKQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39947; Mature: 39947
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLYWLDEWLTNSRSQQQARLPMTGSDLLDDVFVKYEFVDLDKPLLFTFSPAGTNLKEQ CCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCHH DLHEDYAPWGYHLARKQDVNVISFQHLGQSNWFRSRNLIFFLEQLSTLLEPFTYRLGYGL HHHHCCCCCCHHHHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC SRGGFAIGAFANLLQLDQVLLFHPVSTKNQNIAPWDDRSSTEIAQKFDWEGDYHDLDLGK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC AKGYIIYDPTNRIDRLHAKRYPELTHLRVFGMGHGTHATYLNKFGFYKQVAVDFMRHQKV CCCEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC DIAQFRQQTKTLRFKEDYYKRLNKANSSSEHRLGLLSKAHNIVIGEKEAHVQEHQAQIDV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCH QPLIDIALKHKDEHPKDAIQLLEMAQLLVPDDPLVEHKLKQLA HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MKLLYWLDEWLTNSRSQQQARLPMTGSDLLDDVFVKYEFVDLDKPLLFTFSPAGTNLKEQ CCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCHH DLHEDYAPWGYHLARKQDVNVISFQHLGQSNWFRSRNLIFFLEQLSTLLEPFTYRLGYGL HHHHCCCCCCHHHHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC SRGGFAIGAFANLLQLDQVLLFHPVSTKNQNIAPWDDRSSTEIAQKFDWEGDYHDLDLGK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC AKGYIIYDPTNRIDRLHAKRYPELTHLRVFGMGHGTHATYLNKFGFYKQVAVDFMRHQKV CCCEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC DIAQFRQQTKTLRFKEDYYKRLNKANSSSEHRLGLLSKAHNIVIGEKEAHVQEHQAQIDV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHCCH QPLIDIALKHKDEHPKDAIQLLEMAQLLVPDDPLVEHKLKQLA HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA