| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yafP [H]
Identifier: 59711951
GI number: 59711951
Start: 1488415
End: 1488882
Strand: Reverse
Name: yafP [H]
Synonym: VF_1344
Alternate gene names: 59711951
Gene position: 1488882-1488415 (Counterclockwise)
Preceding gene: 59711952
Following gene: 59711950
Centisome position: 51.38
GC content: 36.32
Gene sequence:
>468_bases ATGATAGTTATCAAAACATATCAGGAAGAGAATGCATCAGCTTTGTGGGATGTGTTTTTTAATACGGTACGAAAAGTAAA TCGTAAAGATTATTCTAATGAGCAAGTGACTGCTTGGGCTCCTGAATCTTTTGATACCGATGTTTGGAAGAACAAAATGC AATCGTTGAATCCTTTTATTGCAGAGATAGACGGTGTGATTGTCGGTTATTCAGACTTGCAAGACGATGGATTGATAGAT CATTTCTTTTGTCATTACCAACATCAAGGAAAAGGGGTTGGTAGTGCTTTAATGACACATATTCTTGAGCTTGCAAAAGA GCGAAAACTGCCTCGTGTGTATTCTCATGTCAGTATTACAGCAAAACCTTTTTATGAGCGTTTTGGTTTTACGGTTGTTA AACCTCAATGTATTGATGTGAGAGGCGAGCAGTTAATCAACTATGTAATGGAAAGACAAATTTTATAA
Upstream 100 bases:
>100_bases GACTCGGAATGACATTAGAAGGGATTATCACCAGCAGTGAGAACTTGAATGGCCGCATTATTGACCATGCTATTTATGGT TTAATAAAAGATAACCATCA
Downstream 100 bases:
>100_bases TTAATTTGAGTAGTAATTATTGTGAAAAATCAGAGCGTAATCATTCTAAAAAGACACATTATGATGTCTGTTTTTGTATT GTTTTTAAATGGGTGTAGCT
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWKNKMQSLNPFIAEIDGVIVGYSDLQDDGLID HFFCHYQHQGKGVGSALMTHILELAKERKLPRVYSHVSITAKPFYERFGFTVVKPQCIDVRGEQLINYVMERQIL
Sequences:
>Translated_155_residues MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWKNKMQSLNPFIAEIDGVIVGYSDLQDDGLID HFFCHYQHQGKGVGSALMTHILELAKERKLPRVYSHVSITAKPFYERFGFTVVKPQCIDVRGEQLINYVMERQIL >Mature_155_residues MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWKNKMQSLNPFIAEIDGVIVGYSDLQDDGLID HFFCHYQHQGKGVGSALMTHILELAKERKLPRVYSHVSITAKPFYERFGFTVVKPQCIDVRGEQLINYVMERQIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1786428, Length=149, Percent_Identity=32.2147651006711, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18008; Mature: 18008
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWKNKMQSLNPFI CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHH AEIDGVIVGYSDLQDDGLIDHFFCHYQHQGKGVGSALMTHILELAKERKLPRVYSHVSIT HHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC AKPFYERFGFTVVKPQCIDVRGEQLINYVMERQIL HHHHHHHCCCEEECCHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWKNKMQSLNPFI CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHH AEIDGVIVGYSDLQDDGLIDHFFCHYQHQGKGVGSALMTHILELAKERKLPRVYSHVSIT HHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC AKPFYERFGFTVVKPQCIDVRGEQLINYVMERQIL HHHHHHHCCCEEECCHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]