| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711950
Identifier: 59711950
GI number: 59711950
Start: 1487887
End: 1488354
Strand: Reverse
Name: 59711950
Synonym: VF_1343
Alternate gene names: NA
Gene position: 1488354-1487887 (Counterclockwise)
Preceding gene: 59711951
Following gene: 59711949
Centisome position: 51.37
GC content: 38.25
Gene sequence:
>468_bases ATGATGTCTGTTTTTGTATTGTTTTTAAATGGGTGTAGCTCATCAGATCCACTAACTATGCAGATCGATCCCGTTAATGT AAAAGCTCAAATGTATACTTACTCTGATCTGAATAAAAATCAGAATGAATTGTGGGAGATAACCCACCAGTACTTGATGA ATCATTATGAACAGCACCAAACAGAGATCAGGGTAATGGATCGTGCTAACGCGTCATTTATTGGCAAAGGGATTGTGAAG TGGAAAATATCACCGACAACGCCTTTATATTGTTACTCAGCGTATGATTTTCGTTTTATGGCGAGAGACAACAAAGCTCG GCTACAACTTAAGCTTTTGCCCGGGGTACCAAGTCTTTCAGGCTGTCACGATTGGGAATTGCCTTCAGAATATGGCTATA AACAGATCCTAGATAAATTTGAAGCGATATCTACGCAATTGAATCATGAATTAATTGGAGAAGATTAA
Upstream 100 bases:
>100_bases GCAGTTAATCAACTATGTAATGGAAAGACAAATTTTATAATTAATTTGAGTAGTAATTATTGTGAAAAATCAGAGCGTAA TCATTCTAAAAAGACACATT
Downstream 100 bases:
>100_bases TGCCGAATTTGTTTACAGGTATACCAAACGAGTTACCTAGTGAGATCTTTGAAGATATTTTATCTACCTCCAATATTCGT ATTGAACGGATTTTATCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MMSVFVLFLNGCSSSDPLTMQIDPVNVKAQMYTYSDLNKNQNELWEITHQYLMNHYEQHQTEIRVMDRANASFIGKGIVK WKISPTTPLYCYSAYDFRFMARDNKARLQLKLLPGVPSLSGCHDWELPSEYGYKQILDKFEAISTQLNHELIGED
Sequences:
>Translated_155_residues MMSVFVLFLNGCSSSDPLTMQIDPVNVKAQMYTYSDLNKNQNELWEITHQYLMNHYEQHQTEIRVMDRANASFIGKGIVK WKISPTTPLYCYSAYDFRFMARDNKARLQLKLLPGVPSLSGCHDWELPSEYGYKQILDKFEAISTQLNHELIGED >Mature_155_residues MMSVFVLFLNGCSSSDPLTMQIDPVNVKAQMYTYSDLNKNQNELWEITHQYLMNHYEQHQTEIRVMDRANASFIGKGIVK WKISPTTPLYCYSAYDFRFMARDNKARLQLKLLPGVPSLSGCHDWELPSEYGYKQILDKFEAISTQLNHELIGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18007; Mature: 18007
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSVFVLFLNGCSSSDPLTMQIDPVNVKAQMYTYSDLNKNQNELWEITHQYLMNHYEQHQ CCEEEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH TEIRVMDRANASFIGKGIVKWKISPTTPLYCYSAYDFRFMARDNKARLQLKLLPGVPSLS HHEEEEECCCCCEEECCEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEECCCCCCC GCHDWELPSEYGYKQILDKFEAISTQLNHELIGED CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMSVFVLFLNGCSSSDPLTMQIDPVNVKAQMYTYSDLNKNQNELWEITHQYLMNHYEQHQ CCEEEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH TEIRVMDRANASFIGKGIVKWKISPTTPLYCYSAYDFRFMARDNKARLQLKLLPGVPSLS HHEEEEECCCCCEEECCEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEECCCCCCC GCHDWELPSEYGYKQILDKFEAISTQLNHELIGED CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA