| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is chbG [C]
Identifier: 59711948
GI number: 59711948
Start: 1486804
End: 1487565
Strand: Direct
Name: chbG [C]
Synonym: VF_1341
Alternate gene names: 59711948
Gene position: 1486804-1487565 (Clockwise)
Preceding gene: 59711946
Following gene: 59711957
Centisome position: 51.31
GC content: 38.06
Gene sequence:
>762_bases ATGAAACTGATCTTAAATGCTGATGATTTTGGTTTATCAGAAAGTGTAAATAACGGCATTGTTGAATGTTTTCAATCAGG CACAGTAAAATCAACAACCGTTATGATGAATCAAGACGGCATCGATCATGCCATTCAACTCTATAAACAAGGTTTGGTAC CCGACATTGGTTTGCATTTTACGGTGACCGCAGGCAAACCCTTATCCAATCCAGAAGATGTGCCTAGCTTAATTGATGAG GATGGATATTTCCTCAATAGACAAACACTCATAACCAAACAGGTTTGCGAAGACGAAGTCTATTTAGAACTGAATACACA ATATCAAGCGGCACTTAATGCAGGCTTTAATATCAATCACATTGATAGCCACCACTTTGCAGGTGTTTACCCGCCATTAA AAAATGCGTTTATTCGCTTTGCTAATGACATTAACCTACCCGTGCGTAGAGTTGATAACATCGTTGCAGGTCAAGATACA CTGACAGTGCCGACCCCAGATGCACTTGATATGCGCTTCTTTGATAGTGGCGCAACATTCGAAAATTTAAAAGCCATTCT TTTAGAATACAAACTCATGCACCCTAATGGTATCGTTGAGTTAATGTGTCATCCAAGCAGTGATAACACAAATGATCTTA TTGAATTAAGCAGTTATAGTGAAATGCGCAGTATTGAAAGAAATATTCTAACCTCACCTGAGTTATCTCATTGGCTAGAA GAACAAGACATTGAGTGTGTGGGATTTAATTATCTAAATTAA
Upstream 100 bases:
>100_bases TATCAGAGCTTTTTAAACGATTTAGATTGATGAGAAAGACACCAAAGCCTACAGTAGAAACGATATATTGATATGTTCAA TCGTTGTTTTGGAGAACATC
Downstream 100 bases:
>100_bases GCACAACCTAACGATAAAAAACAGCAAGCCACACTGTCGTCTCATTTGGTGCTGTGGCTTGCACCTTATGTTTTTCGTGC GCTTTAATATTAAGGTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKLILNADDFGLSESVNNGIVECFQSGTVKSTTVMMNQDGIDHAIQLYKQGLVPDIGLHFTVTAGKPLSNPEDVPSLIDE DGYFLNRQTLITKQVCEDEVYLELNTQYQAALNAGFNINHIDSHHFAGVYPPLKNAFIRFANDINLPVRRVDNIVAGQDT LTVPTPDALDMRFFDSGATFENLKAILLEYKLMHPNGIVELMCHPSSDNTNDLIELSSYSEMRSIERNILTSPELSHWLE EQDIECVGFNYLN
Sequences:
>Translated_253_residues MKLILNADDFGLSESVNNGIVECFQSGTVKSTTVMMNQDGIDHAIQLYKQGLVPDIGLHFTVTAGKPLSNPEDVPSLIDE DGYFLNRQTLITKQVCEDEVYLELNTQYQAALNAGFNINHIDSHHFAGVYPPLKNAFIRFANDINLPVRRVDNIVAGQDT LTVPTPDALDMRFFDSGATFENLKAILLEYKLMHPNGIVELMCHPSSDNTNDLIELSSYSEMRSIERNILTSPELSHWLE EQDIECVGFNYLN >Mature_253_residues MKLILNADDFGLSESVNNGIVECFQSGTVKSTTVMMNQDGIDHAIQLYKQGLVPDIGLHFTVTAGKPLSNPEDVPSLIDE DGYFLNRQTLITKQVCEDEVYLELNTQYQAALNAGFNINHIDSHHFAGVYPPLKNAFIRFANDINLPVRRVDNIVAGQDT LTVPTPDALDMRFFDSGATFENLKAILLEYKLMHPNGIVELMCHPSSDNTNDLIELSSYSEMRSIERNILTSPELSHWLE EQDIECVGFNYLN
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
Organism=Escherichia coli, GI1788028, Length=245, Percent_Identity=32.2448979591837, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 28370; Mature: 28370
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLILNADDFGLSESVNNGIVECFQSGTVKSTTVMMNQDGIDHAIQLYKQGLVPDIGLHF CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEE TVTAGKPLSNPEDVPSLIDEDGYFLNRQTLITKQVCEDEVYLELNTQYQAALNAGFNINH EEECCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCEEEHHHCCCCCCC IDSHHFAGVYPPLKNAFIRFANDINLPVRRVDNIVAGQDTLTVPTPDALDMRFFDSGATF CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEEECCCCCH ENLKAILLEYKLMHPNGIVELMCHPSSDNTNDLIELSSYSEMRSIERNILTSPELSHWLE HHHHHHHHHHEEECCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH EQDIECVGFNYLN HCCCEEEECCCCC >Mature Secondary Structure MKLILNADDFGLSESVNNGIVECFQSGTVKSTTVMMNQDGIDHAIQLYKQGLVPDIGLHF CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEE TVTAGKPLSNPEDVPSLIDEDGYFLNRQTLITKQVCEDEVYLELNTQYQAALNAGFNINH EEECCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCCEEEHHHCCCCCCC IDSHHFAGVYPPLKNAFIRFANDINLPVRRVDNIVAGQDTLTVPTPDALDMRFFDSGATF CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEEECCCCCH ENLKAILLEYKLMHPNGIVELMCHPSSDNTNDLIELSSYSEMRSIERNILTSPELSHWLE HHHHHHHHHHEEECCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH EQDIECVGFNYLN HCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA