The gene/protein map for NC_006840 is currently unavailable.
Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711904

Identifier: 59711904

GI number: 59711904

Start: 1448795

End: 1449979

Strand: Reverse

Name: 59711904

Synonym: VF_1297

Alternate gene names: NA

Gene position: 1449979-1448795 (Counterclockwise)

Preceding gene: 59711905

Following gene: 59711903

Centisome position: 50.04

GC content: 37.05

Gene sequence:

>1185_bases
TTGAAGATAATTAGTGGCGTTTCGCAAAAAAACAATTCATATGATGCCGTATATGACTGTATTCGAAATATGGCTACTGA
ACAATCTGCTCCAAATTTAATTTTATGTTATTTCACTGAGAGACATAATAAAGAAACGATCATCTCGACACTAAAAAGTC
AGTTTCCGTCTAGTAAAATTCATGGGTGTACGTCTTGCCAAGGGATAATGACCGATCAGGGATTTGCTGATGACCACTCC
ATAGCGGTATGGGGAATTTTCGATTCCGGTTTAGGTTGCTATGGAACAAGTATCAGCCAATTTGTTTCTCACTATGATAT
AGAGTCATTAACCATCCACTTATTAGAAGAAGCAATTAAAGATAGTGGTAGAGAAGGGGAATTACCTTCATTAGTATTAT
TACACGCAACTTCAGGCCATGAAGAAAAAATAATTTCAGTTATTGATACTTTTTTTGGCTCTCCAGTTCCACTTATTGGG
GGAACTGCCGCAGATAATCATAACCAAGGCTTATGGAGTGTCTTTACTCAGGATGGTTGTGTGAAAAGCGGTATTTCCAT
TTCAGTTTTCTATCCTTCTTGTAAAGTTTCTTACTCATTTCACTCGGGTTACGCACCTTCAAATGTCTCTGGCATAGCTA
CGAAAACTGACCAACGAACCATTTATGAAATAGATAATCGTCCGGCTCTTGAGGTTTATAAAGAGTGGACGAATATGTCT
TGTTTGTTAAACAAAAAAACTAATTTATTAGAAAACATGGCTCAATACCCATTCGGACGTATTGCAGGTTATATGTATGA
TATTCCATACTTTAAATTGGCACATCCAACTAAGATAACGAATGACGGAGGGATTGAATGCTTCGCTAATATATATGAAG
GCGAAGAAGTATTTGTTATGTATGGAGAAAAAGATCAAATCATATCACGACCTCAACGGGTCATTGACTCCGCGACGAAT
TTTAAACAAGAGAAATTTGTTCCAATTGGTGGCATTAATATTTTTTGTGCCGGTTCAATGATGCACATTAAATCCTCTAT
GTTAGATGTCTGTGATTCTGTGAATGCGGCAATGCATGGAGCTCCTTATATTTGCCCATTTACGTTTGGTGAACAAGGTC
GTTTTACTGGTGGGGAAAATGCTCACGGTAACTTAATGGTATCAACCGTTTTATTTCATAATTAG

Upstream 100 bases:

>100_bases
TAATTTCTTTTCATAGGGTTAAATAGATAACGTTCAAAAATCAATCGCTCGAACATAAATATGTAGAATATGCATATAAA
TATGACTATTTGGAGCAATT

Downstream 100 bases:

>100_bases
GTATTGTCTGTGAAAAATCATTCTGAAAAAGAACAATTTCAAGAGATACTGTTGGAATTAAAGCGAAGTAAAGAACGTGA
AGCCCAACTTCATAAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKIISGVSQKNNSYDAVYDCIRNMATEQSAPNLILCYFTERHNKETIISTLKSQFPSSKIHGCTSCQGIMTDQGFADDHS
IAVWGIFDSGLGCYGTSISQFVSHYDIESLTIHLLEEAIKDSGREGELPSLVLLHATSGHEEKIISVIDTFFGSPVPLIG
GTAADNHNQGLWSVFTQDGCVKSGISISVFYPSCKVSYSFHSGYAPSNVSGIATKTDQRTIYEIDNRPALEVYKEWTNMS
CLLNKKTNLLENMAQYPFGRIAGYMYDIPYFKLAHPTKITNDGGIECFANIYEGEEVFVMYGEKDQIISRPQRVIDSATN
FKQEKFVPIGGINIFCAGSMMHIKSSMLDVCDSVNAAMHGAPYICPFTFGEQGRFTGGENAHGNLMVSTVLFHN

Sequences:

>Translated_394_residues
MKIISGVSQKNNSYDAVYDCIRNMATEQSAPNLILCYFTERHNKETIISTLKSQFPSSKIHGCTSCQGIMTDQGFADDHS
IAVWGIFDSGLGCYGTSISQFVSHYDIESLTIHLLEEAIKDSGREGELPSLVLLHATSGHEEKIISVIDTFFGSPVPLIG
GTAADNHNQGLWSVFTQDGCVKSGISISVFYPSCKVSYSFHSGYAPSNVSGIATKTDQRTIYEIDNRPALEVYKEWTNMS
CLLNKKTNLLENMAQYPFGRIAGYMYDIPYFKLAHPTKITNDGGIECFANIYEGEEVFVMYGEKDQIISRPQRVIDSATN
FKQEKFVPIGGINIFCAGSMMHIKSSMLDVCDSVNAAMHGAPYICPFTFGEQGRFTGGENAHGNLMVSTVLFHN
>Mature_394_residues
MKIISGVSQKNNSYDAVYDCIRNMATEQSAPNLILCYFTERHNKETIISTLKSQFPSSKIHGCTSCQGIMTDQGFADDHS
IAVWGIFDSGLGCYGTSISQFVSHYDIESLTIHLLEEAIKDSGREGELPSLVLLHATSGHEEKIISVIDTFFGSPVPLIG
GTAADNHNQGLWSVFTQDGCVKSGISISVFYPSCKVSYSFHSGYAPSNVSGIATKTDQRTIYEIDNRPALEVYKEWTNMS
CLLNKKTNLLENMAQYPFGRIAGYMYDIPYFKLAHPTKITNDGGIECFANIYEGEEVFVMYGEKDQIISRPQRVIDSATN
FKQEKFVPIGGINIFCAGSMMHIKSSMLDVCDSVNAAMHGAPYICPFTFGEQGRFTGGENAHGNLMVSTVLFHN

Specific function: Unknown

COG id: COG3287

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43472; Mature: 43472

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISGVSQKNNSYDAVYDCIRNMATEQSAPNLILCYFTERHNKETIISTLKSQFPSSKI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
HGCTSCQGIMTDQGFADDHSIAVWGIFDSGLGCYGTSISQFVSHYDIESLTIHLLEEAIK
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
DSGREGELPSLVLLHATSGHEEKIISVIDTFFGSPVPLIGGTAADNHNQGLWSVFTQDGC
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
VKSGISISVFYPSCKVSYSFHSGYAPSNVSGIATKTDQRTIYEIDNRPALEVYKEWTNMS
CCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHCCCE
CLLNKKTNLLENMAQYPFGRIAGYMYDIPYFKLAHPTKITNDGGIECFANIYEGEEVFVM
EEECCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCEECCCCCCEEEEEEECCCEEEEE
YGEKDQIISRPQRVIDSATNFKQEKFVPIGGINIFCAGSMMHIKSSMLDVCDSVNAAMHG
ECCCHHHHHHHHHHHHHHHCCCHHCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
APYICPFTFGEQGRFTGGENAHGNLMVSTVLFHN
CCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKIISGVSQKNNSYDAVYDCIRNMATEQSAPNLILCYFTERHNKETIISTLKSQFPSSKI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
HGCTSCQGIMTDQGFADDHSIAVWGIFDSGLGCYGTSISQFVSHYDIESLTIHLLEEAIK
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
DSGREGELPSLVLLHATSGHEEKIISVIDTFFGSPVPLIGGTAADNHNQGLWSVFTQDGC
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
VKSGISISVFYPSCKVSYSFHSGYAPSNVSGIATKTDQRTIYEIDNRPALEVYKEWTNMS
CCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHCCCE
CLLNKKTNLLENMAQYPFGRIAGYMYDIPYFKLAHPTKITNDGGIECFANIYEGEEVFVM
EEECCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCEECCCCCCEEEEEEECCCEEEEE
YGEKDQIISRPQRVIDSATNFKQEKFVPIGGINIFCAGSMMHIKSSMLDVCDSVNAAMHG
ECCCHHHHHHHHHHHHHHHCCCHHCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
APYICPFTFGEQGRFTGGENAHGNLMVSTVLFHN
CCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA