| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711850
Identifier: 59711850
GI number: 59711850
Start: 1382587
End: 1383942
Strand: Reverse
Name: 59711850
Synonym: VF_1243
Alternate gene names: NA
Gene position: 1383942-1382587 (Counterclockwise)
Preceding gene: 59711852
Following gene: 59711848
Centisome position: 47.76
GC content: 37.91
Gene sequence:
>1356_bases GTGATTACAGTTGGTAAGAAGGATGGCTTATCACTAAAAATTTCTCATATTGTTGAAGAATCCAAACAACATGAACTAGA AATGTTTCTTTTTATTCCTGGTGAGCTTGGATTAAACAAGGATATGATTTCTGAATCTGAGTTTTATTACAACTCGATTC AAAGCCAACGAACCTATTTTAGTGATAAAAACCACCTACCTCTTGTGCACTCTCGCCTTGCACAACGTGGACGTTTATCG AGCGAACAATATCGTTTAAGTTTGAGTTTATACGCCTATCAATATGCCCTTGCATTAGAAAAAGCGATACAACAACTAAG CGATACGACTCGTGACGACATTACGCACGAGGAAGTTGAAGATGCTATTGAACTCGCAATTGATATCCTTAGAAAGTTAC GTCGTAATGTACCTTATGACGATACGCTAAAGCGTTACTACGCAAACATCGACAATTACCTTTCTTGGTACACCGAGCAG AAGTTTCTTTCTCTGATTGCGCACATGCCGCGTAATGAAGAATATAAAGAAGTGAAAGAGAAGCTTATCGATTTCTGTGA AAAAGAAGATCTGCATCGTTTAGATAAGAGTTATAACTCTCGTAAAGCTCGGGAAGATATTACTCGTATGTCAAACAAAA TGCGTCTACTGCGTCGTTTAATCGAATTCCCTATCGTGCTTAAAGAAAAGAACCTTGCTTTAGGTAAACATATTAAGCGT ATGGTAAAAGGCGGTGCAACGGCTGTGGTCATGATCTTTGTGTCATTGATGGTGATTCAAGCTCGTGGTTTCTTGGGTGA AATTACAGCCTCTTTCATTTTTGCGGTCTCATTTATCTATGCTATGCGTGAAGTCTTTAAGGATGACTTACGTGATGTAA TGTGGCGTTGGATACGTAAAGGACAACCTAAGTGGCGTAAACGCTACCTTGACCCAACAAGTAATACTTATGTTGGAAGA AAATTAGAATGGCTTGATTACATGACGTTTGCTGAGCTTGATTCTGATATTCAAAAATTACGTAAACACCGTGTTGTGCA ACGTGAAGAAGTGGTTTTAGCCTATAAAAGTCAAACTAAAATGGCCATAACCAAATTCATGAGTGGTTATGAACAAACTC GTGAAACCATGCTGATTGATTTGCGCCCTATCGCTCGTTTAATGGAGAAAGGGTCTCAAAAGATTTATCACTTAAATGAT GGTCAAGTCAGTAAAGAATCTGTTGAGAAACGTCATTTAATTAATTTGGTCATTAGAGAGACAATGGATGATTACAGCAC GCAGTTGCACCGCTGGAAAATCATTGTTAACCGTTCAAAGATTATTGATATAGAAAAGATATCTGACGAAAAATAA
Upstream 100 bases:
>100_bases ATTTTAACCATTACTTCAATTCCTAAATAAAATACTCGGTGATTATACCCGAACTCTGATATGCTTGCTGTATGAATTAG CATTTTTATAGGAATTTCCT
Downstream 100 bases:
>100_bases TTAAACAGCTTATGATACAAAAAAACGCCTTTATTGCTTAACGAAATAAAGGCGTTTTTTATTGCTACTTAATAATATTA AGTTACGCTGTAACTACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MITVGKKDGLSLKISHIVEESKQHELEMFLFIPGELGLNKDMISESEFYYNSIQSQRTYFSDKNHLPLVHSRLAQRGRLS SEQYRLSLSLYAYQYALALEKAIQQLSDTTRDDITHEEVEDAIELAIDILRKLRRNVPYDDTLKRYYANIDNYLSWYTEQ KFLSLIAHMPRNEEYKEVKEKLIDFCEKEDLHRLDKSYNSRKAREDITRMSNKMRLLRRLIEFPIVLKEKNLALGKHIKR MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAVSFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYLDPTSNTYVGR KLEWLDYMTFAELDSDIQKLRKHRVVQREEVVLAYKSQTKMAITKFMSGYEQTRETMLIDLRPIARLMEKGSQKIYHLND GQVSKESVEKRHLINLVIRETMDDYSTQLHRWKIIVNRSKIIDIEKISDEK
Sequences:
>Translated_451_residues MITVGKKDGLSLKISHIVEESKQHELEMFLFIPGELGLNKDMISESEFYYNSIQSQRTYFSDKNHLPLVHSRLAQRGRLS SEQYRLSLSLYAYQYALALEKAIQQLSDTTRDDITHEEVEDAIELAIDILRKLRRNVPYDDTLKRYYANIDNYLSWYTEQ KFLSLIAHMPRNEEYKEVKEKLIDFCEKEDLHRLDKSYNSRKAREDITRMSNKMRLLRRLIEFPIVLKEKNLALGKHIKR MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAVSFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYLDPTSNTYVGR KLEWLDYMTFAELDSDIQKLRKHRVVQREEVVLAYKSQTKMAITKFMSGYEQTRETMLIDLRPIARLMEKGSQKIYHLND GQVSKESVEKRHLINLVIRETMDDYSTQLHRWKIIVNRSKIIDIEKISDEK >Mature_451_residues MITVGKKDGLSLKISHIVEESKQHELEMFLFIPGELGLNKDMISESEFYYNSIQSQRTYFSDKNHLPLVHSRLAQRGRLS SEQYRLSLSLYAYQYALALEKAIQQLSDTTRDDITHEEVEDAIELAIDILRKLRRNVPYDDTLKRYYANIDNYLSWYTEQ KFLSLIAHMPRNEEYKEVKEKLIDFCEKEDLHRLDKSYNSRKAREDITRMSNKMRLLRRLIEFPIVLKEKNLALGKHIKR MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAVSFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYLDPTSNTYVGR KLEWLDYMTFAELDSDIQKLRKHRVVQREEVVLAYKSQTKMAITKFMSGYEQTRETMLIDLRPIARLMEKGSQKIYHLND GQVSKESVEKRHLINLVIRETMDDYSTQLHRWKIIVNRSKIIDIEKISDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53553; Mature: 53553
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVGKKDGLSLKISHIVEESKQHELEMFLFIPGELGLNKDMISESEFYYNSIQSQRTYF CCCCCCCCCCEEEHHHHHHHHHHCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHC SDKNHLPLVHSRLAQRGRLSSEQYRLSLSLYAYQYALALEKAIQQLSDTTRDDITHEEVE CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH DAIELAIDILRKLRRNVPYDDTLKRYYANIDNYLSWYTEQKFLSLIAHMPRNEEYKEVKE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KLIDFCEKEDLHRLDKSYNSRKAREDITRMSNKMRLLRRLIEFPIVLKEKNLALGKHIKR HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAVSFIYAMREVFKDDLRDVMWRWIRK HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQPKWRKRYLDPTSNTYVGRKLEWLDYMTFAELDSDIQKLRKHRVVQREEVVLAYKSQTK CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH MAITKFMSGYEQTRETMLIDLRPIARLMEKGSQKIYHLNDGQVSKESVEKRHLINLVIRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH TMDDYSTQLHRWKIIVNRSKIIDIEKISDEK HHHHHHHHHHHHHEEECCCCEEEHHHCCCCC >Mature Secondary Structure MITVGKKDGLSLKISHIVEESKQHELEMFLFIPGELGLNKDMISESEFYYNSIQSQRTYF CCCCCCCCCCEEEHHHHHHHHHHCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHC SDKNHLPLVHSRLAQRGRLSSEQYRLSLSLYAYQYALALEKAIQQLSDTTRDDITHEEVE CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH DAIELAIDILRKLRRNVPYDDTLKRYYANIDNYLSWYTEQKFLSLIAHMPRNEEYKEVKE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KLIDFCEKEDLHRLDKSYNSRKAREDITRMSNKMRLLRRLIEFPIVLKEKNLALGKHIKR HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAVSFIYAMREVFKDDLRDVMWRWIRK HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQPKWRKRYLDPTSNTYVGRKLEWLDYMTFAELDSDIQKLRKHRVVQREEVVLAYKSQTK CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH MAITKFMSGYEQTRETMLIDLRPIARLMEKGSQKIYHLNDGQVSKESVEKRHLINLVIRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH TMDDYSTQLHRWKIIVNRSKIIDIEKISDEK HHHHHHHHHHHHHEEECCCCEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA