| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is huvX
Identifier: 59711834
GI number: 59711834
Start: 1360566
End: 1361102
Strand: Direct
Name: huvX
Synonym: VF_1227
Alternate gene names: NA
Gene position: 1360566-1361102 (Clockwise)
Preceding gene: 59711833
Following gene: 59711835
Centisome position: 46.96
GC content: 34.64
Gene sequence:
>537_bases ATGAACATGCCGCATAAATTTAATCAATATAATAAGAGTATTCCAGTGAATAAACACGTTATCGAATTATTAGAAAATGA CCCATCATTATTACCAAGTGATATAGCTAAGCAACTGTCTATTAGTGAAGTCGAAGTGGTTAAATCATTACCTAAAGAGA TGGTGACTATGGTTTCTGGCCTGAAAACCCAAGAGATTTTAGAAGGGCTAGTAGGTTTTGGTGATGTAACAACCATCGTA CATTCATTTGGTTCTATCTTTGAAGTTAAAGCTCCATTTCCAAAAGGGAAAATAGCGCATGGTTATTATAATCTTATGGG GCGAGAGGGGCAGTTACACGGTCACTTAAAATTAGATTTAATTCAAGATATCGCATTAATTAGCAAACCGTTCAGAGGAA CTGAAAGTCATTACTTTGGCTTCTTTAATCATGACGGGCATTCCGTATTTAAGATCTATTTAGGTCGAGATAAAAAGCGC CAACTTATTCCTGAACAAGTTGAAGCGTTTAATGTCTTAAAACAAGAATATAAATAA
Upstream 100 bases:
>100_bases GATTATTTAAGTTTAACGTTAGCGGGTGAATTTTGGGCAGTGACTTTAGCACAAAGTGTGATATCCGCTTTATCAATGAC GAACAAACAGCCTGTTTTTA
Downstream 100 bases:
>100_bases AAAATAGTCAGCTCAGCATACAACTCAGCACCAAATTTAAAAGGAAAGAAAAATGAACTCAAATGTTAAGCAGGAAAGAT TACAAAATCGTCTTGGCCCT
Product: HuvX protein
Products: NA
Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNMPHKFNQYNKSIPVNKHVIELLENDPSLLPSDIAKQLSISEVEVVKSLPKEMVTMVSGLKTQEILEGLVGFGDVTTIV HSFGSIFEVKAPFPKGKIAHGYYNLMGREGQLHGHLKLDLIQDIALISKPFRGTESHYFGFFNHDGHSVFKIYLGRDKKR QLIPEQVEAFNVLKQEYK
Sequences:
>Translated_178_residues MNMPHKFNQYNKSIPVNKHVIELLENDPSLLPSDIAKQLSISEVEVVKSLPKEMVTMVSGLKTQEILEGLVGFGDVTTIV HSFGSIFEVKAPFPKGKIAHGYYNLMGREGQLHGHLKLDLIQDIALISKPFRGTESHYFGFFNHDGHSVFKIYLGRDKKR QLIPEQVEAFNVLKQEYK >Mature_178_residues MNMPHKFNQYNKSIPVNKHVIELLENDPSLLPSDIAKQLSISEVEVVKSLPKEMVTMVSGLKTQEILEGLVGFGDVTTIV HSFGSIFEVKAPFPKGKIAHGYYNLMGREGQLHGHLKLDLIQDIALISKPFRGTESHYFGFFNHDGHSVFKIYLGRDKKR QLIPEQVEAFNVLKQEYK
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20207; Mature: 20207
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPHKFNQYNKSIPVNKHVIELLENDPSLLPSDIAKQLSISEVEVVKSLPKEMVTMVSG CCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHC LKTQEILEGLVGFGDVTTIVHSFGSIFEVKAPFPKGKIAHGYYNLMGREGQLHGHLKLDL CCHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHHH IQDIALISKPFRGTESHYFGFFNHDGHSVFKIYLGRDKKRQLIPEQVEAFNVLKQEYK HHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MNMPHKFNQYNKSIPVNKHVIELLENDPSLLPSDIAKQLSISEVEVVKSLPKEMVTMVSG CCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHC LKTQEILEGLVGFGDVTTIVHSFGSIFEVKAPFPKGKIAHGYYNLMGREGQLHGHLKLDL CCHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHHH IQDIALISKPFRGTESHYFGFFNHDGHSVFKIYLGRDKKRQLIPEQVEAFNVLKQEYK HHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA