| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711802
Identifier: 59711802
GI number: 59711802
Start: 1327916
End: 1328302
Strand: Direct
Name: 59711802
Synonym: VF_1195
Alternate gene names: NA
Gene position: 1327916-1328302 (Clockwise)
Preceding gene: 59711801
Following gene: 59711805
Centisome position: 45.83
GC content: 40.31
Gene sequence:
>387_bases ATGAAAATTGCTCACAAACGTAAAGTTCAGTCTAAGCTGCATAAACGCATTAAAGCTAAAGTTACTGCACCAAAAACTGA AGTGAAAAAAGCAGCTAAACCTGCAAAAGTAGCTAAACCAGTTGAGAAAAAAGTGGAAGCAGTAGTTGCAGAAGCACCAA AAGCAGCAGCAGCAGACATCGCACTTACGCCAAAGCAACAGACTGTATTTGACATTGTTTGTCAAAATCCTGAAGGCATC AATTCAAAAGAAATTGGTCTTGCAGCTGGTCAAGAAGAAGCAAAAGCGGCAGCATGGGCAACAGGTGGCTTGAAGAAGCT AGTTGAAGAAAACCTAGTTGTACGTGAACAACTTGCTGGTAATAAAGTGATTTATAAAGCGGCTTAA
Upstream 100 bases:
>100_bases ACTATTTGGGTTACATTTTAGGAATTGACATCTTTTTTCCGCTATCAATTTGAGAGGGTAACTCACAAATATAGATATAG CGCAACGGAGTTTAAGTTTC
Downstream 100 bases:
>100_bases TCGTTTAATAAACTATTTTATAGACACAAAGAAGCCGAGATTACCTCGGTTTTTTTGTGCCTTGAAAATGATGTTTAGAT AGTACCAATTCCATTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKIAHKRKVQSKLHKRIKAKVTAPKTEVKKAAKPAKVAKPVEKKVEAVVAEAPKAAAADIALTPKQQTVFDIVCQNPEGI NSKEIGLAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA
Sequences:
>Translated_128_residues MKIAHKRKVQSKLHKRIKAKVTAPKTEVKKAAKPAKVAKPVEKKVEAVVAEAPKAAAADIALTPKQQTVFDIVCQNPEGI NSKEIGLAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA >Mature_128_residues MKIAHKRKVQSKLHKRIKAKVTAPKTEVKKAAKPAKVAKPVEKKVEAVVAEAPKAAAADIALTPKQQTVFDIVCQNPEGI NSKEIGLAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13669; Mature: 13669
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAHKRKVQSKLHKRIKAKVTAPKTEVKKAAKPAKVAKPVEKKVEAVVAEAPKAAAADI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE ALTPKQQTVFDIVCQNPEGINSKEIGLAAGQEEAKAAAWATGGLKKLVEENLVVREQLAG EECCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKVIYKAA CEEEEECC >Mature Secondary Structure MKIAHKRKVQSKLHKRIKAKVTAPKTEVKKAAKPAKVAKPVEKKVEAVVAEAPKAAAADI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE ALTPKQQTVFDIVCQNPEGINSKEIGLAAGQEEAKAAAWATGGLKKLVEENLVVREQLAG EECCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKVIYKAA CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA