Click here to switch to the map view.

The map label for this gene is 59711782

Identifier: 59711782

GI number: 59711782

Start: 1304343

End: 1304897

Strand: Reverse

Name: 59711782

Synonym: VF_1175

Alternate gene names: NA

Gene position: 1304897-1304343 (Counterclockwise)

Preceding gene: 59711783

Following gene: 59711773

Centisome position: 45.03

GC content: 37.3

Gene sequence:

>555_bases
ATGAATATGAATAAGAAAAAGCACACTCTATCTCCTAGAGCGCAAAAGTTAAGAGCTGAATGGAAAGGTATGAAAAGTGA
TTATCGCTTTATTTCCCATTCATTCAATTGCGTAAAAATACATATCCATACACCTGATGATGGTATGTATAACCGCTCGG
TTGGCTGCTTAAAAGAGGGCCGCGAAAAAGCATTAAAAGAAGCAGTGAAACAACGAAACAAAGTGGGTAAAGAACTATGG
GGTAGCTGTTGGAACGCAGTATTAAATACACCAAGTTTGTTTGAACGCCTTCCTCACAGCCTTGAGCCTGATATTATCAC
TAAAAAACGCACCCTACTCTCTGGCGAAGTAAGAACCACTGATTACTATATTGTTCGTTGGAAAGAATTAGTTGATGGTG
AATATAAGCCGAAAAGTCGCCTATTCTCGCATGGTAACGGCAACGACAAATTAAGTGCTTATACTAAAGCGAAAAAAGTA
ATGCTTGAAGTGAACAAAGAGTTCATTCCTATATTAAAGAAAATGGGACGCTTTAATATTATTAAAGTAGATTAG

Upstream 100 bases:

>100_bases
TTCTATTTTTTACAAAAACTTTACGCTTTCTCACCACTTCACTATTAACAATATGCTCAATTAATGTAATATTGTCATTA
ATGCATCAACACACAACATA

Downstream 100 bases:

>100_bases
TTATAAAAAATGGCGGGAATTCCCGCCATTTTTTATATCAAAACCATAAGTCATTTACATATCTTTAGTGTGTGAATGAT
AGCCACGTAAGTAATCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNMNKKKHTLSPRAQKLRAEWKGMKSDYRFISHSFNCVKIHIHTPDDGMYNRSVGCLKEGREKALKEAVKQRNKVGKELW
GSCWNAVLNTPSLFERLPHSLEPDIITKKRTLLSGEVRTTDYYIVRWKELVDGEYKPKSRLFSHGNGNDKLSAYTKAKKV
MLEVNKEFIPILKKMGRFNIIKVD

Sequences:

>Translated_184_residues
MNMNKKKHTLSPRAQKLRAEWKGMKSDYRFISHSFNCVKIHIHTPDDGMYNRSVGCLKEGREKALKEAVKQRNKVGKELW
GSCWNAVLNTPSLFERLPHSLEPDIITKKRTLLSGEVRTTDYYIVRWKELVDGEYKPKSRLFSHGNGNDKLSAYTKAKKV
MLEVNKEFIPILKKMGRFNIIKVD
>Mature_184_residues
MNMNKKKHTLSPRAQKLRAEWKGMKSDYRFISHSFNCVKIHIHTPDDGMYNRSVGCLKEGREKALKEAVKQRNKVGKELW
GSCWNAVLNTPSLFERLPHSLEPDIITKKRTLLSGEVRTTDYYIVRWKELVDGEYKPKSRLFSHGNGNDKLSAYTKAKKV
MLEVNKEFIPILKKMGRFNIIKVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21424; Mature: 21424

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNKKKHTLSPRAQKLRAEWKGMKSDYRFISHSFNCVKIHIHTPDDGMYNRSVGCLKEG
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHH
REKALKEAVKQRNKVGKELWGSCWNAVLNTPSLFERLPHSLEPDIITKKRTLLSGEVRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCEECC
DYYIVRWKELVDGEYKPKSRLFSHGNGNDKLSAYTKAKKVMLEVNKEFIPILKKMGRFNI
CEEEEEEHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IKVD
EEEC
>Mature Secondary Structure
MNMNKKKHTLSPRAQKLRAEWKGMKSDYRFISHSFNCVKIHIHTPDDGMYNRSVGCLKEG
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHH
REKALKEAVKQRNKVGKELWGSCWNAVLNTPSLFERLPHSLEPDIITKKRTLLSGEVRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHCCCEECC
DYYIVRWKELVDGEYKPKSRLFSHGNGNDKLSAYTKAKKVMLEVNKEFIPILKKMGRFNI
CEEEEEEHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IKVD
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA