Click here to switch to the map view.

The map label for this gene is 59711773

Identifier: 59711773

GI number: 59711773

Start: 1293306

End: 1294283

Strand: Reverse

Name: 59711773

Synonym: VF_1166

Alternate gene names: NA

Gene position: 1294283-1293306 (Counterclockwise)

Preceding gene: 59711782

Following gene: 59711766

Centisome position: 44.67

GC content: 37.73

Gene sequence:

>978_bases
ATGTTCAACTTTGTTGAGCCGCCTAATGCATTCTATGATTTTGAAAACATATTGACCCAAGATGAATGGCAAAAAAAACA
AGGTTGGTTTAAAGATAAAATTACCGAATTAAACTCTGATGTGATTGGCTTTCAAGAGGTATTCAGTCCCAACGCATTAA
AAGCGTTAGTTGATGAGTTAGGGTATGCGTATTTTTGTACGGTAGATGAACCAAAATCTGAAGATGGCTATGTCTTCAAT
TCCCCGGTGGTTGCCTTTGCTTCACGCTATCCAATATTAAACGCTCAACCTGTAATAGCTGAACAAACACAACTTGAACG
ATTTGGCATTGAGTTTGAATTTAATCGTATTCCCGTTCATGCCAGTATCGAACTGCCTCACTTGGGTATAACAGATTGCT
ATGTCGTGCATTTTAAATCTCAACGCCCAAAAGAGCCTGAAGTTAATAATGAGATAGATGAAGAGAGTCTCTCTTCCCTT
AATCAGCTCCATAATGAGCAATTAGGATCTTGGCTTTCTACCGCTCAACGAGGGTTAGAAGCGAATATTCTACATAACCA
TATTATTCAGCAACGCAAAAAAACAAACCAAGCTATCGTCGTCATGGGCGATTTTAATAAGCCCTTGTTTCACGATGAAT
TCAAAGGATTACTGTCTCATGAACTACGATTTGATAAGTTTAGCTCTGACTATTTAGCTCAATTTCAACTAAAAGACAGT
TGGAATCTTTATGGAAAATTAAAAGGGATAGATTTATTGGAAGAACGAACTTATACGCATTACTACGGCGCAAAAGGCTC
TGTGTTAGATTACATACTGCTTTCTAATGAATTTGATAGCTCATTTTCTGGCAATATTTTAGAAGTGGTTGACTACACGG
TGACAGATAAACACATTGTAAACCCGACATTCGATATTGACCAATTCAGTACCGATCACGCTCTAGTTTCCATTACAGCT
CGTATACGTCAGGCATAA

Upstream 100 bases:

>100_bases
CCCCTTTACACTGAAGGTATATCCACTTCATATTCATCATAAAAATAAAGAGCCTTGTATTTTGTCATCACCAGAAAGCC
TCACCTTTACTACCATCAAT

Downstream 100 bases:

>100_bases
AAAATGTCTAATACCTTAGGTATTAGGCTAAGTATTCATCTGTGATTATTTTTCCATCTTTAATATTAATAATGCGTTTC
GTTCTCTGAGCTAGCGCATT

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFNFVEPPNAFYDFENILTQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDGYVFN
SPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEESLSSL
NQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQAIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDS
WNLYGKLKGIDLLEERTYTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIVNPTFDIDQFSTDHALVSITA
RIRQA

Sequences:

>Translated_325_residues
MFNFVEPPNAFYDFENILTQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDGYVFN
SPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEESLSSL
NQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQAIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDS
WNLYGKLKGIDLLEERTYTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIVNPTFDIDQFSTDHALVSITA
RIRQA
>Mature_325_residues
MFNFVEPPNAFYDFENILTQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDELGYAYFCTVDEPKSEDGYVFN
SPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVHASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEESLSSL
NQLHNEQLGSWLSTAQRGLEANILHNHIIQQRKKTNQAIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDS
WNLYGKLKGIDLLEERTYTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIVNPTFDIDQFSTDHALVSITA
RIRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37451; Mature: 37451

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFVEPPNAFYDFENILTQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDEL
CCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHC
GYAYFCTVDEPKSEDGYVFNSPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVH
CCEEEEEECCCCCCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECEEEEE
ASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEESLSSLNQLHNEQLGSWLSTAQRGLE
EEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANILHNHIIQQRKKTNQAIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDS
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
WNLYGKLKGIDLLEERTYTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIV
CCEEEEECCCCHHHHCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEC
NPTFDIDQFSTDHALVSITARIRQA
CCCCCCCCCCCCCCEEEEEHHHHCC
>Mature Secondary Structure
MFNFVEPPNAFYDFENILTQDEWQKKQGWFKDKITELNSDVIGFQEVFSPNALKALVDEL
CCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHC
GYAYFCTVDEPKSEDGYVFNSPVVAFASRYPILNAQPVIAEQTQLERFGIEFEFNRIPVH
CCEEEEEECCCCCCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECEEEEE
ASIELPHLGITDCYVVHFKSQRPKEPEVNNEIDEESLSSLNQLHNEQLGSWLSTAQRGLE
EEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANILHNHIIQQRKKTNQAIVVMGDFNKPLFHDEFKGLLSHELRFDKFSSDYLAQFQLKDS
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
WNLYGKLKGIDLLEERTYTHYYGAKGSVLDYILLSNEFDSSFSGNILEVVDYTVTDKHIV
CCEEEEECCCCHHHHCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEC
NPTFDIDQFSTDHALVSITARIRQA
CCCCCCCCCCCCCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA