| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711736
Identifier: 59711736
GI number: 59711736
Start: 1251403
End: 1252362
Strand: Reverse
Name: 59711736
Synonym: VF_1129
Alternate gene names: NA
Gene position: 1252362-1251403 (Counterclockwise)
Preceding gene: 59711737
Following gene: 59711731
Centisome position: 43.22
GC content: 42.71
Gene sequence:
>960_bases ATGTTTGATTTATCACGTATTTCGGGTTTCGAAAACGCATCAATTACTCAAACTGATACGCTACAAACCTTGTGGGGCGG TTATGGGGAGTTGGTGCGTTTGCATTTACGCAATGCCCCTACTTCCTCGGTTATCATCAAACAAATCACTTTACCCAAGC CTAAAGTGCATCCTAGAGGTTGGAATACGGATCGCTCGCATCAACGTAAGCTTGATTCATACCAAGTGGAACTCAACTGG TATCAAGATTATGCCAATTCAGTGTCACTGTATAACCCTGTACCCTGCTGTTTATATGTAGAGCAACGTGATAATGAACT CGTGTTAGTACTTGAAGATCTGGCGACCGCTGGCTTTCCTCTTGTAAAAACCGACGTATCATTAGACGAAGCCAAAGCCT GTTTAACTTGGCTTGCGTATTTTCATATCGAGCACTTAAACACTCAACCAATTGGATTATGGGAAACAGGTACTTATTGG CATTTAGACACGCGCCCTGATGAGCTTGAAGCCTTAACGGACATACCATTAAAAGACGCAGCGCTTAAGATTGATCAAAC ACTTAAAAATACCCGCTATCAAACGCTTGTACATGGTGATGCTAAGCTAGCGAACTTCTGTTTTTCTGAAGATGGAAAAC ACGTTGCTGCGGTTGATTTCCAATACATAGGAAAAGGCTGCGGAATGAAGGATGTGATTTTATTTATCAGCAGTTGCATT CCCCCAGAAAAATGCGCAGAGCTTGAGAGCGAACTACTCGACCACTACTTTGAGCAAATCAAACACGCATTAGGTGAAAA CCAATTAGAAACAGCCCTTGAAATAGAAGCAGAATGGCGACCTCTGTATTGCATTGCATGGGCTGATTTCCACCGCTTCG TAAAAGGCTGGAGTCCAGAGCATTGGAAGATTAATGAGTATACTGAGGGGTTTAAAGAAAGAGCTTTGAGGGTTTTGTAG
Upstream 100 bases:
>100_bases GCTGCGGTAAACGTGATCATGTACGATCGCATGGCAAAAGGCGACAACTTCTCAAACCATAAATAATCTAAATTAAACTG GATGAATAAAGGAACTCGAC
Downstream 100 bases:
>100_bases GGAAAGGTCGCATGGGAGCGACCTTTTTGTGTGGAGGTATAGTTGCTAAGTTTTTGGACATAAATCAGTTAGAGCATTAA GTCTAACCTGACTAGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Containing Kinase Domain; Kinase Domain-Containing Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MFDLSRISGFENASITQTDTLQTLWGGYGELVRLHLRNAPTSSVIIKQITLPKPKVHPRGWNTDRSHQRKLDSYQVELNW YQDYANSVSLYNPVPCCLYVEQRDNELVLVLEDLATAGFPLVKTDVSLDEAKACLTWLAYFHIEHLNTQPIGLWETGTYW HLDTRPDELEALTDIPLKDAALKIDQTLKNTRYQTLVHGDAKLANFCFSEDGKHVAAVDFQYIGKGCGMKDVILFISSCI PPEKCAELESELLDHYFEQIKHALGENQLETALEIEAEWRPLYCIAWADFHRFVKGWSPEHWKINEYTEGFKERALRVL
Sequences:
>Translated_319_residues MFDLSRISGFENASITQTDTLQTLWGGYGELVRLHLRNAPTSSVIIKQITLPKPKVHPRGWNTDRSHQRKLDSYQVELNW YQDYANSVSLYNPVPCCLYVEQRDNELVLVLEDLATAGFPLVKTDVSLDEAKACLTWLAYFHIEHLNTQPIGLWETGTYW HLDTRPDELEALTDIPLKDAALKIDQTLKNTRYQTLVHGDAKLANFCFSEDGKHVAAVDFQYIGKGCGMKDVILFISSCI PPEKCAELESELLDHYFEQIKHALGENQLETALEIEAEWRPLYCIAWADFHRFVKGWSPEHWKINEYTEGFKERALRVL >Mature_319_residues MFDLSRISGFENASITQTDTLQTLWGGYGELVRLHLRNAPTSSVIIKQITLPKPKVHPRGWNTDRSHQRKLDSYQVELNW YQDYANSVSLYNPVPCCLYVEQRDNELVLVLEDLATAGFPLVKTDVSLDEAKACLTWLAYFHIEHLNTQPIGLWETGTYW HLDTRPDELEALTDIPLKDAALKIDQTLKNTRYQTLVHGDAKLANFCFSEDGKHVAAVDFQYIGKGCGMKDVILFISSCI PPEKCAELESELLDHYFEQIKHALGENQLETALEIEAEWRPLYCIAWADFHRFVKGWSPEHWKINEYTEGFKERALRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36719; Mature: 36719
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLSRISGFENASITQTDTLQTLWGGYGELVRLHLRNAPTSSVIIKQITLPKPKVHPRG CCCCHHHCCCCCCCCCCHHHHHHHHCCHHHEEEEHCCCCCCHHEEEEEEECCCCCCCCCC WNTDRSHQRKLDSYQVELNWYQDYANSVSLYNPVPCCLYVEQRDNELVLVLEDLATAGFP CCCCHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHCCCC LVKTDVSLDEAKACLTWLAYFHIEHLNTQPIGLWETGTYWHLDTRPDELEALTDIPLKDA EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCHHHHHHHCCCCHHH ALKIDQTLKNTRYQTLVHGDAKLANFCFSEDGKHVAAVDFQYIGKGCGMKDVILFISSCI HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCC PPEKCAELESELLDHYFEQIKHALGENQLETALEIEAEWRPLYCIAWADFHRFVKGWSPE CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCEEEEEEHHHHHHHHHCCCCC HWKINEYTEGFKERALRVL CEECHHHHHHHHHHHHHCC >Mature Secondary Structure MFDLSRISGFENASITQTDTLQTLWGGYGELVRLHLRNAPTSSVIIKQITLPKPKVHPRG CCCCHHHCCCCCCCCCCHHHHHHHHCCHHHEEEEHCCCCCCHHEEEEEEECCCCCCCCCC WNTDRSHQRKLDSYQVELNWYQDYANSVSLYNPVPCCLYVEQRDNELVLVLEDLATAGFP CCCCHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHCCCC LVKTDVSLDEAKACLTWLAYFHIEHLNTQPIGLWETGTYWHLDTRPDELEALTDIPLKDA EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCHHHHHHHCCCCHHH ALKIDQTLKNTRYQTLVHGDAKLANFCFSEDGKHVAAVDFQYIGKGCGMKDVILFISSCI HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCC PPEKCAELESELLDHYFEQIKHALGENQLETALEIEAEWRPLYCIAWADFHRFVKGWSPE CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCEEEEEEHHHHHHHHHCCCCC HWKINEYTEGFKERALRVL CEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA