Click here to switch to the map view.

The map label for this gene is yhiP [H]

Identifier: 59711731

GI number: 59711731

Start: 1242890

End: 1244377

Strand: Reverse

Name: yhiP [H]

Synonym: VF_1124

Alternate gene names: 59711731

Gene position: 1244377-1242890 (Counterclockwise)

Preceding gene: 59711736

Following gene: 59711728

Centisome position: 42.95

GC content: 40.39

Gene sequence:

>1488_bases
ATGGATAATAAAGTAAGTATATTAAACCAACCAAAGCCATTTAAGATGATATTTTTCATTGAATTATGGGAGCGGTTTGG
TTACTACGGCCTTCAAGGGATCCTCGCCGTCTACTTTGTAGATAAGCTTGGCTTTAGCATGCAAGACTCTTTCGTTACCT
TTGGTGCATTTGCGGCCTTAGTGTATGGGCTTGTCTCTGTTGGTGGCTACGTCGGAGATTATGTTCTAGGAACGAAACGC
ACCATGGTGTTCGGTGCCGTTGTTCTTGCTTTGGGTTATTTTTTAATGGGCTTCTCCATTTTAAATCCTAACTTTATCTA
TTTAGCCCTTGGTGCTATCGCCGTTGGTAATGGTTTATTTAAAGCAAATCCATCCAGCCTATTAGCTAAGTGTTATGAGA
AAGGCGATTCACGCTTAGATGGTGCATTCACCCTTTATTATATGTCCATTAATATTGGCTCTTTAGTTTCCCTTTCTATA
AGCCCTGTTATTGCCAATAATTATGGTTATGAATACGCATTTGTCATCTGTGGTTTAGGTCTTATCGCTAGTTTATTTAG
CTACTTTTCATTGCGCAGTACAGTGCAAGGAATTGGCTCTGAACCTGATGCTCTGCCTCTCAACAAAACCAAAGCGCTTA
TCGTTTTAATTGGTACCGTTGCATCTACTCTAGTGTGTGCATGGCTATTGCAAAACATCATGATGGCAAACTTAGCACTC
GGTCTAATCGGTGTTGGTGTGGTTGGCTTCTTCTTAAAAGAAACGTTTAAAGAAACAGGTGAACAACGCAACAAAATGAT
TGTGGCTTTCATTCTTATGCTGCAAGCGATCATTTTCTACGTGTTATATGCTCAGATGCCAACATCACTTAACTTTTTTG
CTATCAATAACGTTCACTCTGAGTTGTTTGGTATTGATATTAACCCTGTTAGTCTACAAGCATTAAATCCATTCTGGGTG
ATTTTCTGTAGCCCTATATTGGCTTACCTATATACTTACTATGGAAACCAAAACAAAGACTTATCTATGCCAGGTAAATT
CACTGTTGGCATGTTTATGTGTGCCTTTGGTTTCTTATCTGTTGCAGCCGCAGGTAACTGGTTTGCTGACCAAGCCGGTA
TGGTTTCGGTTTGGTGGATGATATTGGTGTACTTATTCCAAAGTTTAGGCGAGTTAATGATCAGTGGTCTTGGCCTTGCG
ATGGTGGCGAGTTTGGTTCCACAACGTTTGATGGGCTTTACGATGGGCGCATGGTTTTTGACTCAAGCTGCTTCTTTCAT
CATTGGTGGTTATGTAGCAACATTCAGTGCAACGCCAGAGCATTTAACCGCTCCTCTGGATACACTGCCTGTTTATACTG
AGCTATTCCAAAACATTGGTTTTGTTACTTTAGCGGTCGCTATTGTAATGGCTTTTACTGCACCTAAATTAAATAAGATG
ATGACAAGCTCACAACCAGAAGATGCTGAATTGGTTGAACAACCATAA

Upstream 100 bases:

>100_bases
ACGGAGGCTAGATTACAAAACAAACAAATATCACGTTTTAATTTTCATAATTAGTTTTTAATGCGCACATAACAACAAAC
AGCTAGGTGAAATAACTAAT

Downstream 100 bases:

>100_bases
GCATTTTTAGCTAATCAGCAAATAATAAAAAACGCTCCTAAATTAGGAGCGTTTAACGTTAAATATCGTTATTACGAATT
AGCAGTTTAATCTAGCCCTA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MDNKVSILNQPKPFKMIFFIELWERFGYYGLQGILAVYFVDKLGFSMQDSFVTFGAFAALVYGLVSVGGYVGDYVLGTKR
TMVFGAVVLALGYFLMGFSILNPNFIYLALGAIAVGNGLFKANPSSLLAKCYEKGDSRLDGAFTLYYMSINIGSLVSLSI
SPVIANNYGYEYAFVICGLGLIASLFSYFSLRSTVQGIGSEPDALPLNKTKALIVLIGTVASTLVCAWLLQNIMMANLAL
GLIGVGVVGFFLKETFKETGEQRNKMIVAFILMLQAIIFYVLYAQMPTSLNFFAINNVHSELFGIDINPVSLQALNPFWV
IFCSPILAYLYTYYGNQNKDLSMPGKFTVGMFMCAFGFLSVAAAGNWFADQAGMVSVWWMILVYLFQSLGELMISGLGLA
MVASLVPQRLMGFTMGAWFLTQAASFIIGGYVATFSATPEHLTAPLDTLPVYTELFQNIGFVTLAVAIVMAFTAPKLNKM
MTSSQPEDAELVEQP

Sequences:

>Translated_495_residues
MDNKVSILNQPKPFKMIFFIELWERFGYYGLQGILAVYFVDKLGFSMQDSFVTFGAFAALVYGLVSVGGYVGDYVLGTKR
TMVFGAVVLALGYFLMGFSILNPNFIYLALGAIAVGNGLFKANPSSLLAKCYEKGDSRLDGAFTLYYMSINIGSLVSLSI
SPVIANNYGYEYAFVICGLGLIASLFSYFSLRSTVQGIGSEPDALPLNKTKALIVLIGTVASTLVCAWLLQNIMMANLAL
GLIGVGVVGFFLKETFKETGEQRNKMIVAFILMLQAIIFYVLYAQMPTSLNFFAINNVHSELFGIDINPVSLQALNPFWV
IFCSPILAYLYTYYGNQNKDLSMPGKFTVGMFMCAFGFLSVAAAGNWFADQAGMVSVWWMILVYLFQSLGELMISGLGLA
MVASLVPQRLMGFTMGAWFLTQAASFIIGGYVATFSATPEHLTAPLDTLPVYTELFQNIGFVTLAVAIVMAFTAPKLNKM
MTSSQPEDAELVEQP
>Mature_495_residues
MDNKVSILNQPKPFKMIFFIELWERFGYYGLQGILAVYFVDKLGFSMQDSFVTFGAFAALVYGLVSVGGYVGDYVLGTKR
TMVFGAVVLALGYFLMGFSILNPNFIYLALGAIAVGNGLFKANPSSLLAKCYEKGDSRLDGAFTLYYMSINIGSLVSLSI
SPVIANNYGYEYAFVICGLGLIASLFSYFSLRSTVQGIGSEPDALPLNKTKALIVLIGTVASTLVCAWLLQNIMMANLAL
GLIGVGVVGFFLKETFKETGEQRNKMIVAFILMLQAIIFYVLYAQMPTSLNFFAINNVHSELFGIDINPVSLQALNPFWV
IFCSPILAYLYTYYGNQNKDLSMPGKFTVGMFMCAFGFLSVAAAGNWFADQAGMVSVWWMILVYLFQSLGELMISGLGLA
MVASLVPQRLMGFTMGAWFLTQAASFIIGGYVATFSATPEHLTAPLDTLPVYTELFQNIGFVTLAVAIVMAFTAPKLNKM
MTSSQPEDAELVEQP

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=395, Percent_Identity=22.5316455696203, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI226371746, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789911, Length=485, Percent_Identity=62.680412371134, Blast_Score=645, Evalue=0.0,
Organism=Escherichia coli, GI1787922, Length=472, Percent_Identity=54.8728813559322, Blast_Score=507, Evalue=1e-145,
Organism=Escherichia coli, GI1786927, Length=470, Percent_Identity=25.9574468085106, Blast_Score=164, Evalue=9e-42,
Organism=Escherichia coli, GI1790572, Length=476, Percent_Identity=27.9411764705882, Blast_Score=154, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17541704, Length=345, Percent_Identity=24.6376811594203, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569141, Length=165, Percent_Identity=32.7272727272727, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571098, Length=337, Percent_Identity=25.5192878338279, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571102, Length=333, Percent_Identity=25.2252252252252, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28571100, Length=333, Percent_Identity=25.2252252252252, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24639585, Length=346, Percent_Identity=24.8554913294798, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24639583, Length=338, Percent_Identity=24.5562130177515, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24639581, Length=337, Percent_Identity=24.3323442136499, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54125; Mature: 54125

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKVSILNQPKPFKMIFFIELWERFGYYGLQGILAVYFVDKLGFSMQDSFVTFGAFAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VYGLVSVGGYVGDYVLGTKRTMVFGAVVLALGYFLMGFSILNPNFIYLALGAIAVGNGLF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
KANPSSLLAKCYEKGDSRLDGAFTLYYMSINIGSLVSLSISPVIANNYGYEYAFVICGLG
CCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCCCCHHHHHHHHHH
LIASLFSYFSLRSTVQGIGSEPDALPLNKTKALIVLIGTVASTLVCAWLLQNIMMANLAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGVGVVGFFLKETFKETGEQRNKMIVAFILMLQAIIFYVLYAQMPTSLNFFAINNVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH
ELFGIDINPVSLQALNPFWVIFCSPILAYLYTYYGNQNKDLSMPGKFTVGMFMCAFGFLS
HHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VAAAGNWFADQAGMVSVWWMILVYLFQSLGELMISGLGLAMVASLVPQRLMGFTMGAWFL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQAASFIIGGYVATFSATPEHLTAPLDTLPVYTELFQNIGFVTLAVAIVMAFTAPKLNKM
HHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
MTSSQPEDAELVEQP
HCCCCCCCCHHCCCC
>Mature Secondary Structure
MDNKVSILNQPKPFKMIFFIELWERFGYYGLQGILAVYFVDKLGFSMQDSFVTFGAFAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VYGLVSVGGYVGDYVLGTKRTMVFGAVVLALGYFLMGFSILNPNFIYLALGAIAVGNGLF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
KANPSSLLAKCYEKGDSRLDGAFTLYYMSINIGSLVSLSISPVIANNYGYEYAFVICGLG
CCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCCCCHHHHHHHHHH
LIASLFSYFSLRSTVQGIGSEPDALPLNKTKALIVLIGTVASTLVCAWLLQNIMMANLAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIGVGVVGFFLKETFKETGEQRNKMIVAFILMLQAIIFYVLYAQMPTSLNFFAINNVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH
ELFGIDINPVSLQALNPFWVIFCSPILAYLYTYYGNQNKDLSMPGKFTVGMFMCAFGFLS
HHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VAAAGNWFADQAGMVSVWWMILVYLFQSLGELMISGLGLAMVASLVPQRLMGFTMGAWFL
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQAASFIIGGYVATFSATPEHLTAPLDTLPVYTELFQNIGFVTLAVAIVMAFTAPKLNKM
HHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
MTSSQPEDAELVEQP
HCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA