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The map label for this gene is cadC [C]

Identifier: 59711723

GI number: 59711723

Start: 1230054

End: 1231334

Strand: Direct

Name: cadC [C]

Synonym: VF_1116

Alternate gene names: 59711723

Gene position: 1230054-1231334 (Clockwise)

Preceding gene: 172087691

Following gene: 59711724

Centisome position: 42.45

GC content: 25.14

Gene sequence:

>1281_bases
ATGAAAGTAAGAATATATGATAATGTGATCTTTTTAGAAGAGCAAAATTGTATAAAAATAAATGAAGTGAAGCATTTAAT
AGAGGGGAAACAGTCAAGTTTATTAAGTTTTTTAATTAGAAATGAAGGGGTTGTCTTTTCAAAAGAAGAAATTCTAGAAA
AAGTATGGAAGAGTGTTGTTACAGATCAAGTTGTTGTCCAAGCCGTATTCAAATTAAGAAAATTATTTAAAGATAACAAT
CTCGAATCTCCAATAGTAACAATACCTCAAAAGGGATATTTGTATGAATCACGTACTATTAAGGAAGATAGTTCTTGGTT
TAGAAAAATTAAAAGAAAAGTTAATTTAAATAATATTTTTCTTACCATATTGATGGTATCTATATTTATGGTCGGCCTTT
ATTATTGTTCATTAGAAAAAGTTGAAGATAATCGCTGTGATACAATTAATTGTAATAATATCGTATATGTGAAATATGAT
AAAATTTCTTCAGAGCAACAAGGGCTATTAAATTTTATTAATTGGCATTTTTCAGTCAATCATAATGTTAATTTTTCATC
TTCACTTGCTTTTAAAGAATTATCTTCAAGAGTTTTAGATATAGATTTTAAGAAAAATAAAATATCATTTTATGATGATA
ATTTAAAAGGTGATTATTTTGAGATAGTTTACAGTGGTAAGATAAGTAAATCCGAATTTTTATTATTGATGATGAATTTA
GAAGAAAGGATATTACTTGATTACGAACATGAAGAGCTGACATCATTTTATAATGGATTACCAAATGAAGCTGAAGCATT
TAATCTGTTTCTATCCTCAATAGGGGACCCAAAAGGAGATTTATTTAATAAGTTTAATATAAAAAAGTTGGAGTTAGCTG
CTAATGTTGATTTAGGTAATCAATATATATTTTCAATGGAATATATAGTGAAGTTATTTTACCTATACGATATATATTAT
AAAGATCCTGTGCTCAAATTAAAGATAGAGAAATTAAATAATCACTTTCTATCTGACTTGAAAAATATAAAGGTAGAAAA
ATATAATTATAAAACATATGAAGCTCTTGCTGCATATGAGTTATCCATTGGTAACCCGTATAAAGCACTAGAGTATTTAA
CTAATTTAGATTTGAAAGAAAAGACATTATATGGACTTTTCTTAAAAGCTAAAACTGAAGAATTATTACAAGAAAAAGAT
ATTTCTAATGCTAAGTACATGAAAATTTATGAAAATATTGGCAGTAGGAATTATAAAATAATGATGAAATCATTTAAATA
A

Upstream 100 bases:

>100_bases
CTTAACTGATGGTACTAAATATCTTAATACAAAGACAAATGAGAAAGTTACATAAATGCTATAATATGGTTATTAAATAT
GTTTGTGTAGAATTGTTAAA

Downstream 100 bases:

>100_bases
TATGGAGAGTAAAGGTGCTTTTAAAAAATAAGATTCTAGTATATTCATCGATATTGGTGGTGGTTGTTGCAACTTTATTA
ACAATGAATGGATATAGAGC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKVRIYDNVIFLEEQNCIKINEVKHLIEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSVVTDQVVVQAVFKLRKLFKDNN
LESPIVTIPQKGYLYESRTIKEDSSWFRKIKRKVNLNNIFLTILMVSIFMVGLYYCSLEKVEDNRCDTINCNNIVYVKYD
KISSEQQGLLNFINWHFSVNHNVNFSSSLAFKELSSRVLDIDFKKNKISFYDDNLKGDYFEIVYSGKISKSEFLLLMMNL
EERILLDYEHEELTSFYNGLPNEAEAFNLFLSSIGDPKGDLFNKFNIKKLELAANVDLGNQYIFSMEYIVKLFYLYDIYY
KDPVLKLKIEKLNNHFLSDLKNIKVEKYNYKTYEALAAYELSIGNPYKALEYLTNLDLKEKTLYGLFLKAKTEELLQEKD
ISNAKYMKIYENIGSRNYKIMMKSFK

Sequences:

>Translated_426_residues
MKVRIYDNVIFLEEQNCIKINEVKHLIEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSVVTDQVVVQAVFKLRKLFKDNN
LESPIVTIPQKGYLYESRTIKEDSSWFRKIKRKVNLNNIFLTILMVSIFMVGLYYCSLEKVEDNRCDTINCNNIVYVKYD
KISSEQQGLLNFINWHFSVNHNVNFSSSLAFKELSSRVLDIDFKKNKISFYDDNLKGDYFEIVYSGKISKSEFLLLMMNL
EERILLDYEHEELTSFYNGLPNEAEAFNLFLSSIGDPKGDLFNKFNIKKLELAANVDLGNQYIFSMEYIVKLFYLYDIYY
KDPVLKLKIEKLNNHFLSDLKNIKVEKYNYKTYEALAAYELSIGNPYKALEYLTNLDLKEKTLYGLFLKAKTEELLQEKD
ISNAKYMKIYENIGSRNYKIMMKSFK
>Mature_426_residues
MKVRIYDNVIFLEEQNCIKINEVKHLIEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSVVTDQVVVQAVFKLRKLFKDNN
LESPIVTIPQKGYLYESRTIKEDSSWFRKIKRKVNLNNIFLTILMVSIFMVGLYYCSLEKVEDNRCDTINCNNIVYVKYD
KISSEQQGLLNFINWHFSVNHNVNFSSSLAFKELSSRVLDIDFKKNKISFYDDNLKGDYFEIVYSGKISKSEFLLLMMNL
EERILLDYEHEELTSFYNGLPNEAEAFNLFLSSIGDPKGDLFNKFNIKKLELAANVDLGNQYIFSMEYIVKLFYLYDIYY
KDPVLKLKIEKLNNHFLSDLKNIKVEKYNYKTYEALAAYELSIGNPYKALEYLTNLDLKEKTLYGLFLKAKTEELLQEKD
ISNAKYMKIYENIGSRNYKIMMKSFK

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790576, Length=81, Percent_Identity=40.7407407407407, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50201; Mature: 50201

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRIYDNVIFLEEQNCIKINEVKHLIEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSVV
CEEEEEECEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHH
TDQVVVQAVFKLRKLFKDNNLESPIVTIPQKGYLYESRTIKEDSSWFRKIKRKVNLNNIF
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHH
LTILMVSIFMVGLYYCSLEKVEDNRCDTINCNNIVYVKYDKISSEQQGLLNFINWHFSVN
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHEEEEEEEC
HNVNFSSSLAFKELSSRVLDIDFKKNKISFYDDNLKGDYFEIVYSGKISKSEFLLLMMNL
CCCCCCCHHHHHHHHCCEEEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECC
EERILLDYEHEELTSFYNGLPNEAEAFNLFLSSIGDPKGDLFNKFNIKKLELAANVDLGN
CCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCC
QYIFSMEYIVKLFYLYDIYYKDPVLKLKIEKLNNHFLSDLKNIKVEKYNYKTYEALAAYE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCHHHHHHEEEE
LSIGNPYKALEYLTNLDLKEKTLYGLFLKAKTEELLQEKDISNAKYMKIYENIGSRNYKI
EECCCHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEE
MMKSFK
EEECCC
>Mature Secondary Structure
MKVRIYDNVIFLEEQNCIKINEVKHLIEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSVV
CEEEEEECEEEEECCCCEEHHHHHHHHCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHH
TDQVVVQAVFKLRKLFKDNNLESPIVTIPQKGYLYESRTIKEDSSWFRKIKRKVNLNNIF
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHH
LTILMVSIFMVGLYYCSLEKVEDNRCDTINCNNIVYVKYDKISSEQQGLLNFINWHFSVN
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHEEEEEEEC
HNVNFSSSLAFKELSSRVLDIDFKKNKISFYDDNLKGDYFEIVYSGKISKSEFLLLMMNL
CCCCCCCHHHHHHHHCCEEEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECC
EERILLDYEHEELTSFYNGLPNEAEAFNLFLSSIGDPKGDLFNKFNIKKLELAANVDLGN
CCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCC
QYIFSMEYIVKLFYLYDIYYKDPVLKLKIEKLNNHFLSDLKNIKVEKYNYKTYEALAAYE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCHHHHHHEEEE
LSIGNPYKALEYLTNLDLKEKTLYGLFLKAKTEELLQEKDISNAKYMKIYENIGSRNYKI
EECCCHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEE
MMKSFK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA