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The map label for this gene is ywbD [H]

Identifier: 59711628

GI number: 59711628

Start: 1127074

End: 1128024

Strand: Direct

Name: ywbD [H]

Synonym: VF_1021

Alternate gene names: 59711628

Gene position: 1127074-1128024 (Clockwise)

Preceding gene: 59711627

Following gene: 59711641

Centisome position: 38.9

GC content: 38.7

Gene sequence:

>951_bases
ATGAAGATAGAAGCATTAGATACGTTATTTACACATCTTGAAGAGCAATTGAATAATCCGCCAAGTGAACTACGTCGTTT
GTTTCATGGGCGCGGTCAATGTTTTGAGGGATTAGAGCAAATTACGGTTGATTGGTTACAGGCAAAAGAGTCAACTGGCC
AGCTTGTGGTGGCTTTATTTAAAGAACAAACCCCTGAATTTGTTGAGCAATTAGTTGTTAAGTTAAATAAGCTTGCAGAA
ACTTCATTATGGAAAGTTGCAAATGGCACGTCGATTTTATTGCAACACCGTTATCAAGAATTCGCCCCAACGCAAGTAGT
TTGGGGAGAGGAAAATACATTTCCTGTCGTAGAAGAGAGTAACCTAAAGTATCAATTAGAGCTTAAAAAGAACCAAAACA
TGGGGATCTTTTTAGATATGCGATACGGTCGTAAATGGGTGCAGACGCACAGCGAAGGTAAATCAGTATTAAACTTGTTT
GCGTATACATGTGGCTTTTCTGTTGCAGCGATTGCCGGTGGTGCAACTCAAGTTGTTAATTTAGATATGGCCAAAGCATC
ATTAGGAAGAGGTCGTGACAATCACCGTCTAAATCAGCATGACTTGTCTAAAGTTAAATTCTTAGGTCATGATATTTTTA
AATCATGGGGTAAAATTAAGAAGTTAGGTCTATATGATCTTATCATTATTGATCCGCCAAGTTTTCAGAAAGGTAGCTTT
GCTTTAACTAAAGATTATCAGAAGATCTTACGCCGTTTACCTAGTCTATTAACAGAAACGGGTGAAGTATTAGCGTGTGT
GAATTCGCCAGCGGTATCTACTGATTTCTTAATTGATGGAATGGCTGAAGAAGCGCCTGAGCTTAAGTTTGTTGAGCGTT
TAGATAATCCACCAGAGTTTAGCGACATTAACCCTGAAAGTGGCCTAAAAGTGATGCGTTTTACTCGTTAA

Upstream 100 bases:

>100_bases
CAAAACAAGGTGAAGAATGGAAAAATGACACCATTCAAGCTGGATTAGCTCAGTGGCAAACACCGTGGACATTAACTTGG
CCAGAGATTAAGAAGAAATC

Downstream 100 bases:

>100_bases
TCTAATTAGTTTGATACAAAAAGCCCTTCTCATCATGTTGATGAAAAGGGCTTTTTTGTTTGGTGAGGCTGTATTATTCT
TCGTTTTCTTGTTCGCGATC

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKIEALDTLFTHLEEQLNNPPSELRRLFHGRGQCFEGLEQITVDWLQAKESTGQLVVALFKEQTPEFVEQLVVKLNKLAE
TSLWKVANGTSILLQHRYQEFAPTQVVWGEENTFPVVEESNLKYQLELKKNQNMGIFLDMRYGRKWVQTHSEGKSVLNLF
AYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNQHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSFQKGSF
ALTKDYQKILRRLPSLLTETGEVLACVNSPAVSTDFLIDGMAEEAPELKFVERLDNPPEFSDINPESGLKVMRFTR

Sequences:

>Translated_316_residues
MKIEALDTLFTHLEEQLNNPPSELRRLFHGRGQCFEGLEQITVDWLQAKESTGQLVVALFKEQTPEFVEQLVVKLNKLAE
TSLWKVANGTSILLQHRYQEFAPTQVVWGEENTFPVVEESNLKYQLELKKNQNMGIFLDMRYGRKWVQTHSEGKSVLNLF
AYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNQHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSFQKGSF
ALTKDYQKILRRLPSLLTETGEVLACVNSPAVSTDFLIDGMAEEAPELKFVERLDNPPEFSDINPESGLKVMRFTR
>Mature_316_residues
MKIEALDTLFTHLEEQLNNPPSELRRLFHGRGQCFEGLEQITVDWLQAKESTGQLVVALFKEQTPEFVEQLVVKLNKLAE
TSLWKVANGTSILLQHRYQEFAPTQVVWGEENTFPVVEESNLKYQLELKKNQNMGIFLDMRYGRKWVQTHSEGKSVLNLF
AYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNQHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSFQKGSF
ALTKDYQKILRRLPSLLTETGEVLACVNSPAVSTDFLIDGMAEEAPELKFVERLDNPPEFSDINPESGLKVMRFTR

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=193, Percent_Identity=31.6062176165803, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787181, Length=180, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 35832; Mature: 35832

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEALDTLFTHLEEQLNNPPSELRRLFHGRGQCFEGLEQITVDWLQAKESTGQLVVALF
CCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHH
KEQTPEFVEQLVVKLNKLAETSLWKVANGTSILLQHRYQEFAPTQVVWGEENTFPVVEES
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEECC
NLKYQLELKKNQNMGIFLDMRYGRKWVQTHSEGKSVLNLFAYTCGFSVAAIAGGATQVVN
CCEEEEEEECCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEE
LDMAKASLGRGRDNHRLNQHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSFQKGSF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
ALTKDYQKILRRLPSLLTETGEVLACVNSPAVSTDFLIDGMAEEAPELKFVERLDNPPEF
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHCCCCHHHHHHCCCCCCC
SDINPESGLKVMRFTR
CCCCCCCCCEEEEECC
>Mature Secondary Structure
MKIEALDTLFTHLEEQLNNPPSELRRLFHGRGQCFEGLEQITVDWLQAKESTGQLVVALF
CCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHH
KEQTPEFVEQLVVKLNKLAETSLWKVANGTSILLQHRYQEFAPTQVVWGEENTFPVVEES
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEECC
NLKYQLELKKNQNMGIFLDMRYGRKWVQTHSEGKSVLNLFAYTCGFSVAAIAGGATQVVN
CCEEEEEEECCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEE
LDMAKASLGRGRDNHRLNQHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSFQKGSF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
ALTKDYQKILRRLPSLLTETGEVLACVNSPAVSTDFLIDGMAEEAPELKFVERLDNPPEF
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHCCCCHHHHHHCCCCCCC
SDINPESGLKVMRFTR
CCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]