| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is hisC [H]
Identifier: 59711621
GI number: 59711621
Start: 1121084
End: 1122124
Strand: Direct
Name: hisC [H]
Synonym: VF_1014
Alternate gene names: 59711621
Gene position: 1121084-1122124 (Clockwise)
Preceding gene: 59711620
Following gene: 59711622
Centisome position: 38.69
GC content: 40.92
Gene sequence:
>1041_bases ATGGAAAAGTTAGCCAGAAAACAAGTACAAGCATTAACACCTTATCTTTCTGCTCGTCGAATCGGTGGTTCAGGGGATGT ATGGTTGAATGCCAATGAATCCCCATTTGATAACGAATATCAGTTTAATTTTGCTCGTCTTAATCGCTATAGCGAATGTC AACCGCCTGAGTTAATTAATGCTTATGCGGCTTATGCAAAGGTAAAGCCTGAGCAGGTTTTAACTTCCCGCGGAGCAGAT GAAGGTATTGAATTACTGGTTCGTGCTTTTTGTGAACCGAACCAAGATGCCATTTTATATTGCCCGCCAACTTATGGAAT GTACTCAATCAGTGCAGAAACCATTGGTGTAGAGACGAAAACGGTTCCACTTACATCCAATTGGCAGCTAGATCTTCCTG CAATAGAAGCAAGCTTAGAAAACGTCAAAGTTGTGTTTGTGTGTAGCCCAAATAATCCAACGGGTAATATCGTTGATCGT AAAGATATTCTTTCATTATTAGAAATGACAAAAGATCGTGCCATTGTTGTAATGGATGAGGCTTACATCGATTTTTGTAT GGAGAAATCGACAGTTGATTTACTGGTTGACTACCCACACCTTGCGATTTTACGTACTTTATCTAAAGCGTTTGCATTAG CTGGGCTTCGTTGTGGTTTCACTCTCGCCAATGAAGAGTTAATTAACGTATTACTGAAAGTGATTGCACCCTACCCAGTG CCAGTACCTGTGGCTGAGATTGCTACTCAAGCTTTATCAGAAGCAGGTCTAGCTCGTATGAAATACCAAATGCTTGACTT AAGTGCTAACCGTGCTTATTTACAAGCAGGATTAATGGTCTTGCCGGGGGTTACCGTTTTTGAAGGTTGGGGCAACTACT TGTTAGTGAAGTTTCCCGATGGTGACTCGGTATTTAAAGCTGCGTGGGATCACGGCATTATTTTACGTAACTCACCAATT GAAAATTGCGTACGCATTAGTGTTGGCAATCGTGAAGAGTGTGAAAAAACATTGGGCTTTATTCGCAATCAATTAATCTA A
Upstream 100 bases:
>100_bases GGAAGGGCTTGATGCTCATAAAAGAGCCGTAACGATTCGAATTGAAAAGCTCGCTCAGTTAGACGTTAATAAACAAGAAG TGAATCAGTAGGAATTCATT
Downstream 100 bases:
>100_bases TACCAATCGTAGTAAATAACTGATCATCCTAGCTAGTTAAAATACTCGATAACTGCGTTAAAATTTTTGATTGTAGAATA ACTACTTATCGAAAAATTTT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYQFNFARLNRYSECQPPELINAYAAYAKVKPEQVLTSRGAD EGIELLVRAFCEPNQDAILYCPPTYGMYSISAETIGVETKTVPLTSNWQLDLPAIEASLENVKVVFVCSPNNPTGNIVDR KDILSLLEMTKDRAIVVMDEAYIDFCMEKSTVDLLVDYPHLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARMKYQMLDLSANRAYLQAGLMVLPGVTVFEGWGNYLLVKFPDGDSVFKAAWDHGIILRNSPI ENCVRISVGNREECEKTLGFIRNQLI
Sequences:
>Translated_346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYQFNFARLNRYSECQPPELINAYAAYAKVKPEQVLTSRGAD EGIELLVRAFCEPNQDAILYCPPTYGMYSISAETIGVETKTVPLTSNWQLDLPAIEASLENVKVVFVCSPNNPTGNIVDR KDILSLLEMTKDRAIVVMDEAYIDFCMEKSTVDLLVDYPHLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARMKYQMLDLSANRAYLQAGLMVLPGVTVFEGWGNYLLVKFPDGDSVFKAAWDHGIILRNSPI ENCVRISVGNREECEKTLGFIRNQLI >Mature_346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYQFNFARLNRYSECQPPELINAYAAYAKVKPEQVLTSRGAD EGIELLVRAFCEPNQDAILYCPPTYGMYSISAETIGVETKTVPLTSNWQLDLPAIEASLENVKVVFVCSPNNPTGNIVDR KDILSLLEMTKDRAIVVMDEAYIDFCMEKSTVDLLVDYPHLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV PVPVAEIATQALSEAGLARMKYQMLDLSANRAYLQAGLMVLPGVTVFEGWGNYLLVKFPDGDSVFKAAWDHGIILRNSPI ENCVRISVGNREECEKTLGFIRNQLI
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=348, Percent_Identity=60.3448275862069, Blast_Score=430, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6322075, Length=378, Percent_Identity=32.2751322751323, Blast_Score=166, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38436; Mature: 38436
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYQFNFARLNRYSECQPPELIN CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEHHHHCCCCCCCCHHHHH AYAAYAKVKPEQVLTSRGADEGIELLVRAFCEPNQDAILYCPPTYGMYSISAETIGVETK HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEECCEEE TVPLTSNWQLDLPAIEASLENVKVVFVCSPNNPTGNIVDRKDILSLLEMTKDRAIVVMDE EEECCCCCEEECHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEH AYIDFCMEKSTVDLLVDYPHLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCC PVPVAEIATQALSEAGLARMKYQMLDLSANRAYLQAGLMVLPGVTVFEGWGNYLLVKFPD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCCEEEECCCCEEEEEECC GDSVFKAAWDHGIILRNSPIENCVRISVGNREECEKTLGFIRNQLI CCCHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYQFNFARLNRYSECQPPELIN CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEHHHHCCCCCCCCHHHHH AYAAYAKVKPEQVLTSRGADEGIELLVRAFCEPNQDAILYCPPTYGMYSISAETIGVETK HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEECCEEE TVPLTSNWQLDLPAIEASLENVKVVFVCSPNNPTGNIVDRKDILSLLEMTKDRAIVVMDE EEECCCCCEEECHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEH AYIDFCMEKSTVDLLVDYPHLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPV HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCC PVPVAEIATQALSEAGLARMKYQMLDLSANRAYLQAGLMVLPGVTVFEGWGNYLLVKFPD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCCEEEECCCCEEEEEECC GDSVFKAAWDHGIILRNSPIENCVRISVGNREECEKTLGFIRNQLI CCCHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA