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The map label for this gene is 59711617

Identifier: 59711617

GI number: 59711617

Start: 1115586

End: 1116692

Strand: Direct

Name: 59711617

Synonym: VF_1010

Alternate gene names: NA

Gene position: 1115586-1116692 (Clockwise)

Preceding gene: 59711596

Following gene: 59711618

Centisome position: 38.5

GC content: 38.48

Gene sequence:

>1107_bases
ATGTGTTGTCGGTACTTAATAAATTACATAAAAACAGGGAACCGGAAATCGGATTTCCAATTTTCTAAGAAAAGGCAGTG
GATTATTATGAAAAAGACTCTTTTAGCTCTTGCAATCGCAAGTATCTCGACTTCAGCTTTTGCTGTTGATACTAGTAGCC
AAAATAGTAAGAATGATGAAATGTTTGCATTTGACCCTATGCATAAAGATCAGTTTTCTGTATCTGGTTCTGTAGGTGTA
GGTGGTTACTATGACACAAAATCAAAAGCGCTGTATGATGATTGGGCTACAGGTTTGACTCTTGCTGTTAACTATCGTAA
CAACCGTGTTGTTGGTTATTTTGAAACTGATTTTATGATGAATTACTCAACAGATCCTGACGAAAAAGCAGCGTCTTCTT
CTGATAAACATTCTGGACCTGCGACTGATGTTGATAAAGCATGGTTAGGTTTTGATACTGGTTTTGGTATCGCATCTTTC
GGTTGGGAAAACGACACAGCTCTTGATGCTGTAGATGGTGCGGGTGATAACACATACGAATTTGGTGCTTCTGCGGGTGA
TGCATCTGATGGTTTCAATGTAGCTAAATTCCAAGGTTCAACAAGTGGTTTCGCTTACGGTGTATCTTACTTTGAAACTG
ATGATAATCGTTCGAAAGCTGATAAAGGTGTGAATGGTTACATTGGTATCGAGCAAGAAATCTTTAATGTTTATGCTGGT
TATGAAACACGTGATAAAGCTGAGTATGACGTAATGACTGTAACGGGTAACGTTAAGCTTGGCGCTGTTAAACTTGGTGC
AAACTTCTGGATTGAAGATGGTAATGCAAAAGATTTAACGGGTAAAAACCTAACAAACCAAGAAAACACTGGTTACTATT
TATCTGCAGGATACGCTGTTACTGAAGACTTAACGTTAGCAGCTGGTTATGCGGCAAATACAAAAGAAGTATCAAAAGTT
GAAACTGATTACTCTTACATGAACGTTGCGGCAATGTATACATTAGCTAAGAATATGGATATGGGTATTGACGTACGCCA
AGATCTTGATGCTGGTGCTGCTGACGAAGAAACTTATGTGTTTGCTGCAGGTTACTACTACTTCTAA

Upstream 100 bases:

>100_bases
TTTGTTGTTTTTTTATTTAATTTTACAATGTTTGACATAGTTATTTAGTTTTTGCAAAGTAGCAACCGAATTCAGAAGTA
CTGATTAATCACACGATTAG

Downstream 100 bases:

>100_bases
TAGTATTACATAAAGTCAAGTAATTATTAAGCCAGTCATATTTGACTGGCTTTTTTTGTTTTTATTTGACTGATTTATTG
TAGTAACGCTGTTTTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Porine

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MCCRYLINYIKTGNRKSDFQFSKKRQWIIMKKTLLALAIASISTSAFAVDTSSQNSKNDEMFAFDPMHKDQFSVSGSVGV
GGYYDTKSKALYDDWATGLTLAVNYRNNRVVGYFETDFMMNYSTDPDEKAASSSDKHSGPATDVDKAWLGFDTGFGIASF
GWENDTALDAVDGAGDNTYEFGASAGDASDGFNVAKFQGSTSGFAYGVSYFETDDNRSKADKGVNGYIGIEQEIFNVYAG
YETRDKAEYDVMTVTGNVKLGAVKLGANFWIEDGNAKDLTGKNLTNQENTGYYLSAGYAVTEDLTLAAGYAANTKEVSKV
ETDYSYMNVAAMYTLAKNMDMGIDVRQDLDAGAADEETYVFAAGYYYF

Sequences:

>Translated_368_residues
MCCRYLINYIKTGNRKSDFQFSKKRQWIIMKKTLLALAIASISTSAFAVDTSSQNSKNDEMFAFDPMHKDQFSVSGSVGV
GGYYDTKSKALYDDWATGLTLAVNYRNNRVVGYFETDFMMNYSTDPDEKAASSSDKHSGPATDVDKAWLGFDTGFGIASF
GWENDTALDAVDGAGDNTYEFGASAGDASDGFNVAKFQGSTSGFAYGVSYFETDDNRSKADKGVNGYIGIEQEIFNVYAG
YETRDKAEYDVMTVTGNVKLGAVKLGANFWIEDGNAKDLTGKNLTNQENTGYYLSAGYAVTEDLTLAAGYAANTKEVSKV
ETDYSYMNVAAMYTLAKNMDMGIDVRQDLDAGAADEETYVFAAGYYYF
>Mature_368_residues
MCCRYLINYIKTGNRKSDFQFSKKRQWIIMKKTLLALAIASISTSAFAVDTSSQNSKNDEMFAFDPMHKDQFSVSGSVGV
GGYYDTKSKALYDDWATGLTLAVNYRNNRVVGYFETDFMMNYSTDPDEKAASSSDKHSGPATDVDKAWLGFDTGFGIASF
GWENDTALDAVDGAGDNTYEFGASAGDASDGFNVAKFQGSTSGFAYGVSYFETDDNRSKADKGVNGYIGIEQEIFNVYAG
YETRDKAEYDVMTVTGNVKLGAVKLGANFWIEDGNAKDLTGKNLTNQENTGYYLSAGYAVTEDLTLAAGYAANTKEVSKV
ETDYSYMNVAAMYTLAKNMDMGIDVRQDLDAGAADEETYVFAAGYYYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40286; Mature: 40286

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCRYLINYIKTGNRKSDFQFSKKRQWIIMKKTLLALAIASISTSAFAVDTSSQNSKNDE
CHHHHHHHHHHCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
MFAFDPMHKDQFSVSGSVGVGGYYDTKSKALYDDWATGLTLAVNYRNNRVVGYFETDFMM
EEEECCCCCCCEEECCCCCCCCEECCCCCEEHHCCCCCEEEEEEECCCEEEEEEEEEEEE
NYSTDPDEKAASSSDKHSGPATDVDKAWLGFDTGFGIASFGWENDTALDAVDGAGDNTYE
ECCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCEE
FGASAGDASDGFNVAKFQGSTSGFAYGVSYFETDDNRSKADKGVNGYIGIEQEIFNVYAG
CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHHCCCCCCEECCHHHHHHHHCC
YETRDKAEYDVMTVTGNVKLGAVKLGANFWIEDGNAKDLTGKNLTNQENTGYYLSAGYAV
CCCCCCCCEEEEEEECCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEE
TEDLTLAAGYAANTKEVSKVETDYSYMNVAAMYTLAKNMDMGIDVRQDLDAGAADEETYV
ECCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEE
FAAGYYYF
EEEEEECC
>Mature Secondary Structure
MCCRYLINYIKTGNRKSDFQFSKKRQWIIMKKTLLALAIASISTSAFAVDTSSQNSKNDE
CHHHHHHHHHHCCCCCCCCEECCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
MFAFDPMHKDQFSVSGSVGVGGYYDTKSKALYDDWATGLTLAVNYRNNRVVGYFETDFMM
EEEECCCCCCCEEECCCCCCCCEECCCCCEEHHCCCCCEEEEEEECCCEEEEEEEEEEEE
NYSTDPDEKAASSSDKHSGPATDVDKAWLGFDTGFGIASFGWENDTALDAVDGAGDNTYE
ECCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCEEEEECCCCCCCEE
FGASAGDASDGFNVAKFQGSTSGFAYGVSYFETDDNRSKADKGVNGYIGIEQEIFNVYAG
CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCHHHHCCCCCCEECCHHHHHHHHCC
YETRDKAEYDVMTVTGNVKLGAVKLGANFWIEDGNAKDLTGKNLTNQENTGYYLSAGYAV
CCCCCCCCEEEEEEECCEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEE
TEDLTLAAGYAANTKEVSKVETDYSYMNVAAMYTLAKNMDMGIDVRQDLDAGAADEETYV
ECCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEE
FAAGYYYF
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA