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The map label for this gene is 59711612

Identifier: 59711612

GI number: 59711612

Start: 1109692

End: 1111242

Strand: Reverse

Name: 59711612

Synonym: VF_1005

Alternate gene names: NA

Gene position: 1111242-1109692 (Counterclockwise)

Preceding gene: 59711613

Following gene: 59711611

Centisome position: 38.35

GC content: 34.3

Gene sequence:

>1551_bases
ATGTTTTCTTACGACTCAATCCTTTCTGATATATCAGATAAGGATCGCTTAGGCACAGATTTAACTTATGAGCCTGAGTT
TGAATTAATTGAAGAAGAAATAAAAAAATCAACGAATCTGTTTGCTACAAGCAAGACGGACTGGTCTACCGTGCATGATA
ACTCATTGAATTTACTAAATGAAACTAGTAAGGATTATAGATTACTTTACTGGTTGTGCTTATCTATAACTAAGAGAAAT
CTTGCTATTGATAATAATGAGTTAATCCGTGTTATTAATGATTTCATCATTAAATTCAAAGACGATATTTACCCAAGAAG
AAAAAGAAGTCTATATTCCTCTATTAATCAAATCATTAATATAATTACAGATACCACAAAATCTATTATCGATAATATAG
ACAATATAAATGATGCAGATATATTAATTACACAATTATCAGTATTAGATGATTCAATTGAGTCTATTTTCCAAAGTAAT
ACAGATAATTTATCTTCTGTTATTTCATTAATCAAAAAACTTAAAAAACGTTTAAAATCAGAAACCGAAAATAATGAGGT
AATAGCAACACAATCGCTACCATCAACACCAATACAAGCTCCATCAACAACATCAACTATCTCATTTTCTCAAGATGACA
TCACAAACGATAGAGATGCAAATAAAGCATTTCGTCACTTACAAGATGTAGCGAGAACGCTCTCAAAATACTGGTTATCT
CAAAAACTTAATGATGAAAAAGTTTTTCAATTAAACCGAACTCTAACATGGCTAACCATATCGCAATTACCTGCAAGTAA
TGATGATAATGTAACTATGTTAAAGCCCGTTCCTCAAGCTAGAACACAATATTTCCAACAATTAAAAGCTGAGTTAAATC
ACTCTGCATTGATTATAGAAATGGAAGAGAGCCTTTCTAAATCACCATTTTGGATTGATGGCCATTTCATGGTTTGGGAA
AGCCTAACGGCACTTAATCATCATGATGCAGCACAAAGCATCACTGATCAGTTGTCTCTATTAATCAACAAAACACCAAG
CATCACCGATCTTAAATTCGATGATGGAACTGAGTTTGCTAGTGAATCAACAAAAGCTTGGATACAACAGCACTGTTCTA
CTTCAACTCATGCTACTACAGCTCCAGTAAGTCATTTCGATGAATCACAAAATAGCAGTGACTGGGAAGATGCGTTCCAA
GAAGCTCTCACATTGTTACAGCAGCACAGCTTAAACGAAGTAATGCAACCTCTCATCCGTGGTCATCATCAATCACGTTC
CAATAGAGAAGCCTTTTTTTGGCAATTTACTCAGGCAAAACTGCTGTTTCAATCCAGCAAATATGAGTTAGCCAACTCAC
TTTTCTCATGGCTTGATAAGCAATATTCCCAATCCGTACTCGCTCATTGGGATCCTATTCTGGAAGAACGTTTACTTGAA
CTGTGGCTTCAATGCCATAACAAATTATCTAAAAAAGACCAAGACAGTCAGTTGCTAGCACACATACGTGAAAGGCTCTG
CTGTTTAAACCCAATACGAGTTCTTAATTAA

Upstream 100 bases:

>100_bases
AATTAAATTCTTCCATTTACTATTTCTATATAAAAATAATTTTAATAATAATTAAATCAATACAATCTGACTTGAACAAC
ATCATTTAGCTAGGGTAAAT

Downstream 100 bases:

>100_bases
ACCCAAGGAGACCCCATGTCAAAAGATGGATCTGTTGCACCAAAAGAACGTGTAAATGTGACATTCAAACCAGTAAGCGG
TGACGCTGCAGAAGATCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; ImpA-Like; ImpA Domain Protein; ImpA N-Terminal; Type VI Secretion Protein VasJ; Protein ImpA; ImpA-Related Domain-Containing Protein; Type VI Secretion-Associated Protein Family; ImpA-Like Protein

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MFSYDSILSDISDKDRLGTDLTYEPEFELIEEEIKKSTNLFATSKTDWSTVHDNSLNLLNETSKDYRLLYWLCLSITKRN
LAIDNNELIRVINDFIIKFKDDIYPRRKRSLYSSINQIINIITDTTKSIIDNIDNINDADILITQLSVLDDSIESIFQSN
TDNLSSVISLIKKLKKRLKSETENNEVIATQSLPSTPIQAPSTTSTISFSQDDITNDRDANKAFRHLQDVARTLSKYWLS
QKLNDEKVFQLNRTLTWLTISQLPASNDDNVTMLKPVPQARTQYFQQLKAELNHSALIIEMEESLSKSPFWIDGHFMVWE
SLTALNHHDAAQSITDQLSLLINKTPSITDLKFDDGTEFASESTKAWIQQHCSTSTHATTAPVSHFDESQNSSDWEDAFQ
EALTLLQQHSLNEVMQPLIRGHHQSRSNREAFFWQFTQAKLLFQSSKYELANSLFSWLDKQYSQSVLAHWDPILEERLLE
LWLQCHNKLSKKDQDSQLLAHIRERLCCLNPIRVLN

Sequences:

>Translated_516_residues
MFSYDSILSDISDKDRLGTDLTYEPEFELIEEEIKKSTNLFATSKTDWSTVHDNSLNLLNETSKDYRLLYWLCLSITKRN
LAIDNNELIRVINDFIIKFKDDIYPRRKRSLYSSINQIINIITDTTKSIIDNIDNINDADILITQLSVLDDSIESIFQSN
TDNLSSVISLIKKLKKRLKSETENNEVIATQSLPSTPIQAPSTTSTISFSQDDITNDRDANKAFRHLQDVARTLSKYWLS
QKLNDEKVFQLNRTLTWLTISQLPASNDDNVTMLKPVPQARTQYFQQLKAELNHSALIIEMEESLSKSPFWIDGHFMVWE
SLTALNHHDAAQSITDQLSLLINKTPSITDLKFDDGTEFASESTKAWIQQHCSTSTHATTAPVSHFDESQNSSDWEDAFQ
EALTLLQQHSLNEVMQPLIRGHHQSRSNREAFFWQFTQAKLLFQSSKYELANSLFSWLDKQYSQSVLAHWDPILEERLLE
LWLQCHNKLSKKDQDSQLLAHIRERLCCLNPIRVLN
>Mature_516_residues
MFSYDSILSDISDKDRLGTDLTYEPEFELIEEEIKKSTNLFATSKTDWSTVHDNSLNLLNETSKDYRLLYWLCLSITKRN
LAIDNNELIRVINDFIIKFKDDIYPRRKRSLYSSINQIINIITDTTKSIIDNIDNINDADILITQLSVLDDSIESIFQSN
TDNLSSVISLIKKLKKRLKSETENNEVIATQSLPSTPIQAPSTTSTISFSQDDITNDRDANKAFRHLQDVARTLSKYWLS
QKLNDEKVFQLNRTLTWLTISQLPASNDDNVTMLKPVPQARTQYFQQLKAELNHSALIIEMEESLSKSPFWIDGHFMVWE
SLTALNHHDAAQSITDQLSLLINKTPSITDLKFDDGTEFASESTKAWIQQHCSTSTHATTAPVSHFDESQNSSDWEDAFQ
EALTLLQQHSLNEVMQPLIRGHHQSRSNREAFFWQFTQAKLLFQSSKYELANSLFSWLDKQYSQSVLAHWDPILEERLLE
LWLQCHNKLSKKDQDSQLLAHIRERLCCLNPIRVLN

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59557; Mature: 59557

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYDSILSDISDKDRLGTDLTYEPEFELIEEEIKKSTNLFATSKTDWSTVHDNSLNLLN
CCCHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHH
ETSKDYRLLYWLCLSITKRNLAIDNNELIRVINDFIIKFKDDIYPRRKRSLYSSINQIIN
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IITDTTKSIIDNIDNINDADILITQLSVLDDSIESIFQSNTDNLSSVISLIKKLKKRLKS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ETENNEVIATQSLPSTPIQAPSTTSTISFSQDDITNDRDANKAFRHLQDVARTLSKYWLS
CCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QKLNDEKVFQLNRTLTWLTISQLPASNDDNVTMLKPVPQARTQYFQQLKAELNHSALIIE
HCCCCHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
MEESLSKSPFWIDGHFMVWESLTALNHHDAAQSITDQLSLLINKTPSITDLKFDDGTEFA
EHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH
SESTKAWIQQHCSTSTHATTAPVSHFDESQNSSDWEDAFQEALTLLQQHSLNEVMQPLIR
HHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GHHQSRSNREAFFWQFTQAKLLFQSSKYELANSLFSWLDKQYSQSVLAHWDPILEERLLE
HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWLQCHNKLSKKDQDSQLLAHIRERLCCLNPIRVLN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MFSYDSILSDISDKDRLGTDLTYEPEFELIEEEIKKSTNLFATSKTDWSTVHDNSLNLLN
CCCHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHH
ETSKDYRLLYWLCLSITKRNLAIDNNELIRVINDFIIKFKDDIYPRRKRSLYSSINQIIN
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IITDTTKSIIDNIDNINDADILITQLSVLDDSIESIFQSNTDNLSSVISLIKKLKKRLKS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ETENNEVIATQSLPSTPIQAPSTTSTISFSQDDITNDRDANKAFRHLQDVARTLSKYWLS
CCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QKLNDEKVFQLNRTLTWLTISQLPASNDDNVTMLKPVPQARTQYFQQLKAELNHSALIIE
HCCCCHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
MEESLSKSPFWIDGHFMVWESLTALNHHDAAQSITDQLSLLINKTPSITDLKFDDGTEFA
EHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH
SESTKAWIQQHCSTSTHATTAPVSHFDESQNSSDWEDAFQEALTLLQQHSLNEVMQPLIR
HHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GHHQSRSNREAFFWQFTQAKLLFQSSKYELANSLFSWLDKQYSQSVLAHWDPILEERLLE
HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWLQCHNKLSKKDQDSQLLAHIRERLCCLNPIRVLN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA