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The map label for this gene is 59711611

Identifier: 59711611

GI number: 59711611

Start: 1109176

End: 1109676

Strand: Reverse

Name: 59711611

Synonym: VF_1004

Alternate gene names: NA

Gene position: 1109676-1109176 (Counterclockwise)

Preceding gene: 59711612

Following gene: 59711610

Centisome position: 38.3

GC content: 36.73

Gene sequence:

>501_bases
ATGTCAAAAGATGGATCTGTTGCACCAAAAGAACGTGTAAATGTGACATTCAAACCAGTAAGCGGTGACGCTGCAGAAGA
TCTTGAACTTCCACTGAAAATGATGGTTCTTGGTGACTTTACTCAGCAAGAAGATGATCGAAAACTTGAAGATCGAAAAC
CATTTAATGTTGATAAAAGCAATTTCAATGACGTTATTGAAAAACAAAACTTAAACATCTCTTTTGGTGTAAAAAACCAA
CTTCAAGATGATGGCGAAGGAAATGAGGAAATTGCAGTCGATCTAAGTTTTAAACATATCAATGATTTTGATCCTTCAAG
CATTGTTGAGCAAGTGCCTGAACTAAAAGGCTTAATGGATTTACGTGAAGCGCTTGTCTCTTTAAAAGGCCCATTAGGCA
ATGTTCCTGCATTCCGCAAAGCAATTGAAGATGCCCTTGTTGATGATGAAGCTCGTGAAAAACTACTAAGTGAATTAGGT
TTAGTGACAGAAAAGGAATAA

Upstream 100 bases:

>100_bases
ATCTAAAAAAGACCAAGACAGTCAGTTGCTAGCACACATACGTGAAAGGCTCTGCTGTTTAAACCCAATACGAGTTCTTA
ATTAAACCCAAGGAGACCCC

Downstream 100 bases:

>100_bases
AACATGTCAGATACAAGCACAGCACAAGAGCTAGATAATCAAGTTACTGTTGGACTTCTTGATCAAATCGTAGCTCAAAC
CAATTTAACTCCAGAAGATG

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Intracellular Growth Locus Subunit A; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKSNFNDVIEKQNLNISFGVKNQ
LQDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELG
LVTEKE

Sequences:

>Translated_166_residues
MSKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKSNFNDVIEKQNLNISFGVKNQ
LQDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELG
LVTEKE
>Mature_165_residues
SKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKSNFNDVIEKQNLNISFGVKNQL
QDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELGL
VTEKE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18500; Mature: 18369

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKS
CCCCCCCCCHHHCCEEEEECCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
NFNDVIEKQNLNISFGVKNQLQDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMD
HHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELGLVTEKE
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKS
CCCCCCCCHHHCCEEEEECCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
NFNDVIEKQNLNISFGVKNQLQDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMD
HHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELGLVTEKE
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA