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The map label for this gene is 59711608

Identifier: 59711608

GI number: 59711608

Start: 1105434

End: 1107185

Strand: Reverse

Name: 59711608

Synonym: VF_1001

Alternate gene names: NA

Gene position: 1107185-1105434 (Counterclockwise)

Preceding gene: 59711609

Following gene: 59711607

Centisome position: 38.21

GC content: 37.16

Gene sequence:

>1752_bases
ATGAGTTTTAATCATTACTATCAATCTGAATTAGCAGCACTGCGCGAATTAGGAAAGTCGTTTTCGAGAGAAAATCCGGC
TTTAGCACCCTATTTAGGTCAAGAGGGATTGGATCCAGATATTGAGCGATTATTCGAAGGATTTGCTTTTTTAGTTGGTC
GTTTACATCAACGCTTAGATAACCAGTTACCAGAATTAACTCATTCATTAATGCGTTTATTGTGGCCTAACTATGTCCAA
GCAATTCCAGCAATGAGTACTCTGCAATTTACACCGGCAAGTGAAGCAACCCAAGCATCAATAATTAAACGTGGTACGGA
AGTACTTAGCCAACCTATTGATGGCATTCAATGTAAATTTAAAACATGTTTTGATGTTGATATTTATCCAGTATCACTTC
ATTCATCGTCTTTTACAGCAAATGGGCATGGTGGCATTTATCAATTACGATTGGAATTACCTTCAGGAATTGATCTAGCG
TCGTTAAATATGAAGCAATTACGTGTTCATTTTAATGGAGACAAAGCCAGCTGCTTATCTCTTATTATGGCGCTATGCTC
TTCCACTACTCAAGCTGAGTTTTGTGCTTTGGATAAAGAGTTAGAACAAATCAATCGCTCAACGTTTCCACCCCATAGCA
TTAAACCTGTTGGCTTTAAAACCAATGAGGCTATTTTTGATTACCCTCTCAATACATTTGAAGGCTACCGACACATTCAA
GAATTTTTTTGTTACCCAGAAAAATATTACTACATTGACTTAACTGAGTTACCAGTTTGGCCAGCTCAGTTTAGTCAAGG
GTGTAAATATGTCGATTTAAAATTCACGTTAGATAACATCACACAACAACCTTTTTACGCTAATCGTGTTCAACCAGAGC
TATTTTGTACCCCAATCGTTAATTCATTTAAAAGTGATACACAACCACTCTTACTTAACCACAGAAAAGATCAATATAAG
ATCACGCCAGTTTCTTTAAATGACGATAGCAGTACTATTTTATCTGTCAAAGAAGTACACGGTTGGAACCCTGGGCAAAA
AGGTCGTATCGATTTTTACCACTTTGAATCATTTGAACATAACGAAAATAAAAATCGCTCAAACTATTACAGTATTCGTC
AAGAAAAGAACATTGTCAGTGGGCACTTTGATACGTATCTGTCTTTTCGCTCTCAACACACTTTTACCAATAGCGTTACT
GTTTCTATTGCCGTTACTGCATGTAATGGGGCATTAGCTCAACGTTTATCTGTAAACTCAATTACAGAAACAACAGATCA
AACAACTGGTTCAGCCACATTTACCAATATCAGAACAGTAACGCCTTGCTACACCCCACCCATTGATAAAGATGGTCTTT
GGTCGCTCATATCAAATATGTCCCTTAATTATCTTTCATTAACCAAGCCTGAAGCGTTTAAACGTATTTTGCTTGCTTAT
GATTTTGCTGGTCAACAAGACGATGCAAAAGGAAAAAAACATAAAAGACTGATCGATGGCATCGTAAGTATATCGACCAA
ACCTTGCGATATGTTATATGAAGGTGCTCCTGTACGAGCAATGAATACACAACTTCATCTCAACACGAAGCACTTTTTAT
GTGAAGGCGAGCTGTATTTATTTTCCACTGTAATTAATGAATTTTTATCGCTTTATACCAGTATGAATTCATTCAACCAA
TTGCACGTTACAAGCACTGATGGAGGAGACTATTCATGGCTACCACGAATGGGGCAACAACCTCTAATTTAG

Upstream 100 bases:

>100_bases
GTGATGTCATCATCAATGGGCAAAATACCGCTATTTCATTTACCGCTCATGCTCAGGCAGCTAACCGTAAAGCTGAAACC
AATATTACACAAGGTGCAGC

Downstream 100 bases:

>100_bases
TCTCGATAACATCAAATCAAATTCCTATTCAATTAGGAATAACCATTGAACATATTGGACATTTATCCTTGATGAAGGCA
TTGGATCATGTATGTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MSFNHYYQSELAALRELGKSFSRENPALAPYLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQ
AIPAMSTLQFTPASEATQASIIKRGTEVLSQPIDGIQCKFKTCFDVDIYPVSLHSSSFTANGHGGIYQLRLELPSGIDLA
SLNMKQLRVHFNGDKASCLSLIMALCSSTTQAEFCALDKELEQINRSTFPPHSIKPVGFKTNEAIFDYPLNTFEGYRHIQ
EFFCYPEKYYYIDLTELPVWPAQFSQGCKYVDLKFTLDNITQQPFYANRVQPELFCTPIVNSFKSDTQPLLLNHRKDQYK
ITPVSLNDDSSTILSVKEVHGWNPGQKGRIDFYHFESFEHNENKNRSNYYSIRQEKNIVSGHFDTYLSFRSQHTFTNSVT
VSIAVTACNGALAQRLSVNSITETTDQTTGSATFTNIRTVTPCYTPPIDKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
DFAGQQDDAKGKKHKRLIDGIVSISTKPCDMLYEGAPVRAMNTQLHLNTKHFLCEGELYLFSTVINEFLSLYTSMNSFNQ
LHVTSTDGGDYSWLPRMGQQPLI

Sequences:

>Translated_583_residues
MSFNHYYQSELAALRELGKSFSRENPALAPYLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQ
AIPAMSTLQFTPASEATQASIIKRGTEVLSQPIDGIQCKFKTCFDVDIYPVSLHSSSFTANGHGGIYQLRLELPSGIDLA
SLNMKQLRVHFNGDKASCLSLIMALCSSTTQAEFCALDKELEQINRSTFPPHSIKPVGFKTNEAIFDYPLNTFEGYRHIQ
EFFCYPEKYYYIDLTELPVWPAQFSQGCKYVDLKFTLDNITQQPFYANRVQPELFCTPIVNSFKSDTQPLLLNHRKDQYK
ITPVSLNDDSSTILSVKEVHGWNPGQKGRIDFYHFESFEHNENKNRSNYYSIRQEKNIVSGHFDTYLSFRSQHTFTNSVT
VSIAVTACNGALAQRLSVNSITETTDQTTGSATFTNIRTVTPCYTPPIDKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
DFAGQQDDAKGKKHKRLIDGIVSISTKPCDMLYEGAPVRAMNTQLHLNTKHFLCEGELYLFSTVINEFLSLYTSMNSFNQ
LHVTSTDGGDYSWLPRMGQQPLI
>Mature_582_residues
SFNHYYQSELAALRELGKSFSRENPALAPYLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQA
IPAMSTLQFTPASEATQASIIKRGTEVLSQPIDGIQCKFKTCFDVDIYPVSLHSSSFTANGHGGIYQLRLELPSGIDLAS
LNMKQLRVHFNGDKASCLSLIMALCSSTTQAEFCALDKELEQINRSTFPPHSIKPVGFKTNEAIFDYPLNTFEGYRHIQE
FFCYPEKYYYIDLTELPVWPAQFSQGCKYVDLKFTLDNITQQPFYANRVQPELFCTPIVNSFKSDTQPLLLNHRKDQYKI
TPVSLNDDSSTILSVKEVHGWNPGQKGRIDFYHFESFEHNENKNRSNYYSIRQEKNIVSGHFDTYLSFRSQHTFTNSVTV
SIAVTACNGALAQRLSVNSITETTDQTTGSATFTNIRTVTPCYTPPIDKDGLWSLISNMSLNYLSLTKPEAFKRILLAYD
FAGQQDDAKGKKHKRLIDGIVSISTKPCDMLYEGAPVRAMNTQLHLNTKHFLCEGELYLFSTVINEFLSLYTSMNSFNQL
HVTSTDGGDYSWLPRMGQQPLI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66177; Mature: 66045

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNHYYQSELAALRELGKSFSRENPALAPYLGQEGLDPDIERLFEGFAFLVGRLHQRLD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NQLPELTHSLMRLLWPNYVQAIPAMSTLQFTPASEATQASIIKRGTEVLSQPIDGIQCKF
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KTCFDVDIYPVSLHSSSFTANGHGGIYQLRLELPSGIDLASLNMKQLRVHFNGDKASCLS
EEEEEEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCEEECCCEEEEEEECCCHHHHHH
LIMALCSSTTQAEFCALDKELEQINRSTFPPHSIKPVGFKTNEAIFDYPLNTFEGYRHIQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH
EFFCYPEKYYYIDLTELPVWPAQFSQGCKYVDLKFTLDNITQQPFYANRVQPELFCTPIV
HHHCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEHHHH
NSFKSDTQPLLLNHRKDQYKITPVSLNDDSSTILSVKEVHGWNPGQKGRIDFYHFESFEH
HHHCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEEHHHCCCCCCCCCCEEEEEECCCCC
NENKNRSNYYSIRQEKNIVSGHFDTYLSFRSQHTFTNSVTVSIAVTACNGALAQRLSVNS
CCCCCCCCEEEEHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCH
ITETTDQTTGSATFTNIRTVTPCYTPPIDKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
HHHCCCCCCCCEEEEECEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHH
DFAGQQDDAKGKKHKRLIDGIVSISTKPCDMLYEGAPVRAMNTQLHLNTKHFLCEGELYL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCEEEECCCEEEECCCHHH
FSTVINEFLSLYTSMNSFNQLHVTSTDGGDYSWLPRMGQQPLI
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFNHYYQSELAALRELGKSFSRENPALAPYLGQEGLDPDIERLFEGFAFLVGRLHQRLD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NQLPELTHSLMRLLWPNYVQAIPAMSTLQFTPASEATQASIIKRGTEVLSQPIDGIQCKF
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
KTCFDVDIYPVSLHSSSFTANGHGGIYQLRLELPSGIDLASLNMKQLRVHFNGDKASCLS
EEEEEEEEEEEEECCCCEEECCCCCEEEEEEECCCCCCEEECCCEEEEEEECCCHHHHHH
LIMALCSSTTQAEFCALDKELEQINRSTFPPHSIKPVGFKTNEAIFDYPLNTFEGYRHIQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH
EFFCYPEKYYYIDLTELPVWPAQFSQGCKYVDLKFTLDNITQQPFYANRVQPELFCTPIV
HHHCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEHHHH
NSFKSDTQPLLLNHRKDQYKITPVSLNDDSSTILSVKEVHGWNPGQKGRIDFYHFESFEH
HHHCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEEHHHCCCCCCCCCCEEEEEECCCCC
NENKNRSNYYSIRQEKNIVSGHFDTYLSFRSQHTFTNSVTVSIAVTACNGALAQRLSVNS
CCCCCCCCEEEEHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCH
ITETTDQTTGSATFTNIRTVTPCYTPPIDKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
HHHCCCCCCCCEEEEECEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHH
DFAGQQDDAKGKKHKRLIDGIVSISTKPCDMLYEGAPVRAMNTQLHLNTKHFLCEGELYL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCEEEECCCEEEECCCHHH
FSTVINEFLSLYTSMNSFNQLHVTSTDGGDYSWLPRMGQQPLI
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA