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The map label for this gene is 59711609

Identifier: 59711609

GI number: 59711609

Start: 1107182

End: 1107607

Strand: Reverse

Name: 59711609

Synonym: VF_1002

Alternate gene names: NA

Gene position: 1107607-1107182 (Counterclockwise)

Preceding gene: 59711610

Following gene: 59711608

Centisome position: 38.23

GC content: 41.55

Gene sequence:

>426_bases
ATGTCGAACCAACGATTATTTGAACGACTATTAAGTGGTACAACACAAAGCAATCAATCTGTCACAGCACAGCATATGAC
GGACTCAATTCGCTCACACGTCAGTCAGTTACTTTCAACAAGACAAGGGGCTGCATTGATCTGTCCTGATTTAGGCTTAC
CAGATCTTAATATGTCTCACATGAGTCCACATGATGCCATCCTTCATATTAAACGCGAGGTTGAACGTGTTATCGCTCGC
TATGAAACGAGAATCATTAATCCTCAAGTCCGCTATTTAGGTGATATCTATAACCCATTACGTCTCTATTTTGATGTCAG
TGGTGATGTCATCATCAATGGGCAAAATACCGCTATTTCATTTACCGCTCATGCTCAGGCAGCTAACCGTAAAGCTGAAA
CCAATATTACACAAGGTGCAGCATGA

Upstream 100 bases:

>100_bases
ATCAAGAGTAATCCCTTTCACCCTGTGTTTAGTAAAAGTCTAATTATTGACAATAAACACAGGGTATTTCACAGGGTGTT
AATGGAATAAAGAGTGGAAT

Downstream 100 bases:

>100_bases
GTTTTAATCATTACTATCAATCTGAATTAGCAGCACTGCGCGAATTAGGAAAGTCGTTTTCGAGAGAAAATCCGGCTTTA
GCACCCTATTTAGGTCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Type VI Secretion Protein VasS

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSNQRLFERLLSGTTQSNQSVTAQHMTDSIRSHVSQLLSTRQGAALICPDLGLPDLNMSHMSPHDAILHIKREVERVIAR
YETRIINPQVRYLGDIYNPLRLYFDVSGDVIINGQNTAISFTAHAQAANRKAETNITQGAA

Sequences:

>Translated_141_residues
MSNQRLFERLLSGTTQSNQSVTAQHMTDSIRSHVSQLLSTRQGAALICPDLGLPDLNMSHMSPHDAILHIKREVERVIAR
YETRIINPQVRYLGDIYNPLRLYFDVSGDVIINGQNTAISFTAHAQAANRKAETNITQGAA
>Mature_140_residues
SNQRLFERLLSGTTQSNQSVTAQHMTDSIRSHVSQLLSTRQGAALICPDLGLPDLNMSHMSPHDAILHIKREVERVIARY
ETRIINPQVRYLGDIYNPLRLYFDVSGDVIINGQNTAISFTAHAQAANRKAETNITQGAA

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15685; Mature: 15554

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQRLFERLLSGTTQSNQSVTAQHMTDSIRSHVSQLLSTRQGAALICPDLGLPDLNMSH
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
MSPHDAILHIKREVERVIARYETRIINPQVRYLGDIYNPLRLYFDVSGDVIINGQNTAIS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEECCCCCEEE
FTAHAQAANRKAETNITQGAA
EEECHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SNQRLFERLLSGTTQSNQSVTAQHMTDSIRSHVSQLLSTRQGAALICPDLGLPDLNMSH
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
MSPHDAILHIKREVERVIARYETRIINPQVRYLGDIYNPLRLYFDVSGDVIINGQNTAIS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEECCCCCEEE
FTAHAQAANRKAETNITQGAA
EEECHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA