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The map label for this gene is 59711602

Identifier: 59711602

GI number: 59711602

Start: 1096970

End: 1098292

Strand: Reverse

Name: 59711602

Synonym: VF_0995

Alternate gene names: NA

Gene position: 1098292-1096970 (Counterclockwise)

Preceding gene: 59711603

Following gene: 59711601

Centisome position: 37.9

GC content: 38.7

Gene sequence:

>1323_bases
ATGCAAAAAGTTATATGGAAAGAAGGCATGCTATTGCGGCCTCAACATTTCCAACAAAGTGATCGTTACTATCAAAATCA
ACTGCAAGTACGCACGCAGAAGCAACACAGGTTTAATTGGGGTTTCCATTCTCTGAGCTTTGATAATCATCATTTATCTG
TTGGAAAGATAGTGATCAGTCAAGCTAGTGGTATTTTACCCGATGGTTCACTATTTGATATTCAACATCAAACAACCCCT
ATTGTTTGGGAGTCTGATGCGCCTAAAACAAACTTAAATCTGTATTTAGCGATTTCTTTATCGACTATCAATAGTCCGGA
AGCTCGCGATGAAAAAGAAACCGAAATTAACACTCGTTATGTTTCTCACGATTTAACCATTTCAGATAATAATGCCCAAG
TACAAAACTTGCAGACTATCAGTTGTGGTGAGTTAGATTTTCATATTATTACCGAAGAAGAGATTGATAATCATTGGGTT
AAAATCAAACTATGTGAAATTAAACAAGTCACTCCAGAAGGTGCGATCCAACTCAACCCTAATTTTGAAGCGAGTTTTAT
CAATGGTGTTCACTCGTCTCTTGTTCATCGTTCGCTACGAGAAGTCTTAACTCTCGTTACTCATAAAGCCGATATTTTAG
CCGAACGTATTACCAAATCAGGACACGCAACCTCAGAAATTGGTGACTTCTTATTGCTTCAATTATTAAATAAGTACGAG
CCTCAACTCCACTATCTAAATAAGTGCTCTCAATACCATCCGGAGGAGCTCTTTTTATTACTTTCATCTTTGCAAGGAGA
GTTGTCTACTTATGATTCAGGTCATCGTCGACCAGATCTAAAATTATCATACAATCATAAAGAACAAGGCGAGTCATTTG
ATCAGATCTTATTTCATTTGCGTAAACAGCTGAATCAGTCATTGAAACAAAACGCCTTTGAGATACCACTACAAAAACGC
AATCACGGTGTACTTATTGCCCCTATTTCTGATGATAGCTTATTGCAAGAAGCCACCTTTATTCTCGCGGCTCGCTCTCA
TACCGACGCTGAAAGCTTACGAAAACAACTGCCACCACAATTAAAAGTCGGACCTGTTGAAAAAATTCGCAACCTTGTAA
ACCTTCAATTACCGGGGATCACTTGTCGCTCACTTTCTGTAGCCCCAAGACAAGTCCCTTTCCATGGTGATTATTGTTAT
TTCACCCTTGATTTAACCTCAAACGATCGCTCTCAACTAACGCAATCTGGAGGATTTGCCTTCCATATTGCAGGTGATTT
CCCTGAGCTTTCTCTTTTCTTTTGGGCAATAAGGAATAGTTAA

Upstream 100 bases:

>100_bases
AATTGATCGCTACCGACTCTTCTATCGTCAAATTAAAACGCGTGAAAAAGAAAAAGAACGCACCACAAAGCAGTAATGCG
CGAATTTAGAGGATAGATAA

Downstream 100 bases:

>100_bases
TATGAACAGCAGCAGCATGGATGACCGTACTGTACTTATCACACAAGAGCCTAATCAAGTTAACCCAACTTTAACTGAAA
GCCCAAGTGCACCCAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MQKVIWKEGMLLRPQHFQQSDRYYQNQLQVRTQKQHRFNWGFHSLSFDNHHLSVGKIVISQASGILPDGSLFDIQHQTTP
IVWESDAPKTNLNLYLAISLSTINSPEARDEKETEINTRYVSHDLTISDNNAQVQNLQTISCGELDFHIITEEEIDNHWV
KIKLCEIKQVTPEGAIQLNPNFEASFINGVHSSLVHRSLREVLTLVTHKADILAERITKSGHATSEIGDFLLLQLLNKYE
PQLHYLNKCSQYHPEELFLLLSSLQGELSTYDSGHRRPDLKLSYNHKEQGESFDQILFHLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDDSLLQEATFILAARSHTDAESLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLTSNDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNS

Sequences:

>Translated_440_residues
MQKVIWKEGMLLRPQHFQQSDRYYQNQLQVRTQKQHRFNWGFHSLSFDNHHLSVGKIVISQASGILPDGSLFDIQHQTTP
IVWESDAPKTNLNLYLAISLSTINSPEARDEKETEINTRYVSHDLTISDNNAQVQNLQTISCGELDFHIITEEEIDNHWV
KIKLCEIKQVTPEGAIQLNPNFEASFINGVHSSLVHRSLREVLTLVTHKADILAERITKSGHATSEIGDFLLLQLLNKYE
PQLHYLNKCSQYHPEELFLLLSSLQGELSTYDSGHRRPDLKLSYNHKEQGESFDQILFHLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDDSLLQEATFILAARSHTDAESLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLTSNDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNS
>Mature_440_residues
MQKVIWKEGMLLRPQHFQQSDRYYQNQLQVRTQKQHRFNWGFHSLSFDNHHLSVGKIVISQASGILPDGSLFDIQHQTTP
IVWESDAPKTNLNLYLAISLSTINSPEARDEKETEINTRYVSHDLTISDNNAQVQNLQTISCGELDFHIITEEEIDNHWV
KIKLCEIKQVTPEGAIQLNPNFEASFINGVHSSLVHRSLREVLTLVTHKADILAERITKSGHATSEIGDFLLLQLLNKYE
PQLHYLNKCSQYHPEELFLLLSSLQGELSTYDSGHRRPDLKLSYNHKEQGESFDQILFHLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDDSLLQEATFILAARSHTDAESLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLTSNDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNS

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50316; Mature: 50316

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVIWKEGMLLRPQHFQQSDRYYQNQLQVRTQKQHRFNWGFHSLSFDNHHLSVGKIVIS
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHEEEE
QASGILPDGSLFDIQHQTTPIVWESDAPKTNLNLYLAISLSTINSPEARDEKETEINTRY
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCHHCCCEEE
VSHDLTISDNNAQVQNLQTISCGELDFHIITEEEIDNHWVKIKLCEIKQVTPEGAIQLNP
EEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEECC
NFEASFINGVHSSLVHRSLREVLTLVTHKADILAERITKSGHATSEIGDFLLLQLLNKYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PQLHYLNKCSQYHPEELFLLLSSLQGELSTYDSGHRRPDLKLSYNHKEQGESFDQILFHL
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHHCCHHHHHHHHH
RKQLNQSLKQNAFEIPLQKRNHGVLIAPISDDSLLQEATFILAARSHTDAESLRKQLPPQ
HHHHHHHHHCCCEECCCEECCCCEEEEECCCCHHHHHHHEEEEECCCCCHHHHHHHCCCC
LKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCYFTLDLTSNDRSQLTQSGGFA
CCCCHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCEE
FHIAGDFPELSLFFWAIRNS
EEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MQKVIWKEGMLLRPQHFQQSDRYYQNQLQVRTQKQHRFNWGFHSLSFDNHHLSVGKIVIS
CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHEEEE
QASGILPDGSLFDIQHQTTPIVWESDAPKTNLNLYLAISLSTINSPEARDEKETEINTRY
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCHHCCCEEE
VSHDLTISDNNAQVQNLQTISCGELDFHIITEEEIDNHWVKIKLCEIKQVTPEGAIQLNP
EEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEECC
NFEASFINGVHSSLVHRSLREVLTLVTHKADILAERITKSGHATSEIGDFLLLQLLNKYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PQLHYLNKCSQYHPEELFLLLSSLQGELSTYDSGHRRPDLKLSYNHKEQGESFDQILFHL
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHHCCHHHHHHHHH
RKQLNQSLKQNAFEIPLQKRNHGVLIAPISDDSLLQEATFILAARSHTDAESLRKQLPPQ
HHHHHHHHHCCCEECCCEECCCCEEEEECCCCHHHHHHHEEEEECCCCCHHHHHHHCCCC
LKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCYFTLDLTSNDRSQLTQSGGFA
CCCCHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCEE
FHIAGDFPELSLFFWAIRNS
EEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA