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The map label for this gene is yigM [H]

Identifier: 59711589

GI number: 59711589

Start: 1077408

End: 1078265

Strand: Reverse

Name: yigM [H]

Synonym: VF_0982

Alternate gene names: 59711589

Gene position: 1078265-1077408 (Counterclockwise)

Preceding gene: 59711590

Following gene: 59711587

Centisome position: 37.21

GC content: 34.97

Gene sequence:

>858_bases
ATGTCATATTTACTTTCAATTACTCTACTATGGGCTTTTTCATTTAGCCTTATCGGCGTATATTTAGCTGGCCAAGTTGA
TGCTTGGTTTTCTGTGCTAATGCGTATTGGTTTAGCTACTTTAGTTTTTCTTCCTTTTCTACGCCCAAAAAATATCTCAT
TGAATACAGCGCTTAAATTAATGGCTATTGGTGCGATTCAATTAGGATTAATGTACGTCTTCTACTATCAATCCTTCTTA
TATCTTACCGTTCCTGAAGTTTTGCTTTTTACTGTAATGACTCCTATTTATATCACTTTATTAAATGATGCATTTGAAGG
TAAATTTCATTCGCACTTTATGATCAGTGCCGTAATAGCAACACTAGGTGCAATTGCCATTCGATATAATGGAATTGATG
CAGGATTTTTATTAGGGTTTGGACTCGTTCAAGGTGCGAACCTTTGTTTTGCAACAGGACAAGTTTGCTATAAACGTTTA
ATGAAAGATCAAGAAATTGAGCAAAAAACGGTTTTTGGTTTCTTCTTTATAGGTGCATTTATTGTTGCCAGTACTTGCTA
TTTATTATTCGGAAATAGTGAAAAGCTGCCAACAACATCCGTTCAGTGGGGAGTATTAATTTATCTTGGCGTGATAGCAT
CAGGCATGGGGTATTTTATGTGGAATAAAGGTGCAACACTGGTGAATGTTGGTGTTTTAGCCGTAATGAATAATCTACTT
ATTCCTGCTGGTATCTTAGTTAATCTATTAATATGGAATCGAGATGCTGACATTCTAAGGCTAAGCATTGGCGGTGCTTT
AATTTTATTGGCGCTTCTTGTTAATCAGAAATTAGAAAAAAGACATCATCAATCTTAA

Upstream 100 bases:

>100_bases
AATTAAGGCTGACTCTTCAGCCTTTTTTATTTGTCTTTTTCCTTTACTGATAGTAAATCTCATTTAGAATGCGTACATTG
TTTTTATTACGAGATGAGAT

Downstream 100 bases:

>100_bases
TCTGTATAAAAAAGAGCAGTATTCATATTTAAATACTGCTCAATCCTTATCAAGCTTGGTTCTTAACTCTTGTCACTCCA
AATGATGCGACAACACAAGT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSYLLSITLLWAFSFSLIGVYLAGQVDAWFSVLMRIGLATLVFLPFLRPKNISLNTALKLMAIGAIQLGLMYVFYYQSFL
YLTVPEVLLFTVMTPIYITLLNDAFEGKFHSHFMISAVIATLGAIAIRYNGIDAGFLLGFGLVQGANLCFATGQVCYKRL
MKDQEIEQKTVFGFFFIGAFIVASTCYLLFGNSEKLPTTSVQWGVLIYLGVIASGMGYFMWNKGATLVNVGVLAVMNNLL
IPAGILVNLLIWNRDADILRLSIGGALILLALLVNQKLEKRHHQS

Sequences:

>Translated_285_residues
MSYLLSITLLWAFSFSLIGVYLAGQVDAWFSVLMRIGLATLVFLPFLRPKNISLNTALKLMAIGAIQLGLMYVFYYQSFL
YLTVPEVLLFTVMTPIYITLLNDAFEGKFHSHFMISAVIATLGAIAIRYNGIDAGFLLGFGLVQGANLCFATGQVCYKRL
MKDQEIEQKTVFGFFFIGAFIVASTCYLLFGNSEKLPTTSVQWGVLIYLGVIASGMGYFMWNKGATLVNVGVLAVMNNLL
IPAGILVNLLIWNRDADILRLSIGGALILLALLVNQKLEKRHHQS
>Mature_284_residues
SYLLSITLLWAFSFSLIGVYLAGQVDAWFSVLMRIGLATLVFLPFLRPKNISLNTALKLMAIGAIQLGLMYVFYYQSFLY
LTVPEVLLFTVMTPIYITLLNDAFEGKFHSHFMISAVIATLGAIAIRYNGIDAGFLLGFGLVQGANLCFATGQVCYKRLM
KDQEIEQKTVFGFFFIGAFIVASTCYLLFGNSEKLPTTSVQWGVLIYLGVIASGMGYFMWNKGATLVNVGVLAVMNNLLI
PAGILVNLLIWNRDADILRLSIGGALILLALLVNQKLEKRHHQS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=287, Percent_Identity=48.780487804878, Blast_Score=274, Evalue=5e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31538; Mature: 31407

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYLLSITLLWAFSFSLIGVYLAGQVDAWFSVLMRIGLATLVFLPFLRPKNISLNTALKL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
MAIGAIQLGLMYVFYYQSFLYLTVPEVLLFTVMTPIYITLLNDAFEGKFHSHFMISAVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TLGAIAIRYNGIDAGFLLGFGLVQGANLCFATGQVCYKRLMKDQEIEQKTVFGFFFIGAF
HHHHHHEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
IVASTCYLLFGNSEKLPTTSVQWGVLIYLGVIASGMGYFMWNKGATLVNVGVLAVMNNLL
HHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
IPAGILVNLLIWNRDADILRLSIGGALILLALLVNQKLEKRHHQS
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]