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The map label for this gene is ybgF [H]

Identifier: 59711571

GI number: 59711571

Start: 1056889

End: 1057647

Strand: Direct

Name: ybgF [H]

Synonym: VF_0964

Alternate gene names: 59711571

Gene position: 1056889-1057647 (Clockwise)

Preceding gene: 59711570

Following gene: 59711572

Centisome position: 36.48

GC content: 40.58

Gene sequence:

>759_bases
ATGAAATACAGTAACCTTAAGCGAATCATTCCGCTTACGTTGCTGGCTAGTGCGGCGACCCTTGTGGTCGCCGCACCTGC
TCCAGTCACAGATTTAAATGCTAGTTCCAATTCTACCTCTTCTGCTCCTGCATCATCGGCAAGTATTGAACGCCTAGAAC
GTTTAATTAAAAGTCGTAATCAAATTCAGCTTCAATTACAACAGCAGTTGGATGGTTTATCTCAAGAGCTTTCAGAGATG
CGAGGCACGGTAGAGCGCAATAGCTATGAACTTGATCAGATGCTTGAGCGTCAACGTCAGCTGTATATTGAAATAGACAA
CATAAGAACAGCTAAACCAACTGTAGAAGCGAAGCCTGAAGCAACAGAAGGTGCTTATGCTGCTGATACTAATGAAAATG
CGGCTTATCAAAATGCAGTGGATTTGATCTTAAAAGAGAAAAACTACGCAGGGGCAACAAAAGCATTTCAAGAATTTGTA
ACGGCATACCCTGATTCAGTATATAGCTCGAATGCACATTACTGGTTAGGACAGTTGTACTTTGCTCAAAAAAATGATGT
AGAAGCAGCCAAGAGTTTTGCTAAAGTCGTTAGTTATGCAGACTCAAATAAACGAGCTGATGCTCTACTGAAGTTAGGCG
AAGTAGCTAAACGCAATAATAATAATGCGGCAGCAAAAAAATATTATCAAAAAGTAGTTAATGAATACCCAGATAGTACG
ACTGCGAAAACTGCAGCATCTAAACTGGAATCACTGTAA

Upstream 100 bases:

>100_bases
GAAGAGAAGCCACTAGTTCTTGGCCAAACAGCTGAAGACTACGCTAAAAACCGTCGTGCAGTATTAGTATACTAATCGAT
AGTTTATAAGGCTGACTTAT

Downstream 100 bases:

>100_bases
CTTTGCTGAATTTTTAGTATTTTTAAAACATAAAGGAGCCTAAGGCTCCTTTTTTATTTCCCCTAACTTGCTGACTAAAT
CATTAGGGGTATAATGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKYSNLKRIIPLTLLASAATLVVAAPAPVTDLNASSNSTSSAPASSASIERLERLIKSRNQIQLQLQQQLDGLSQELSEM
RGTVERNSYELDQMLERQRQLYIEIDNIRTAKPTVEAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFV
TAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFAKVVSYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST
TAKTAASKLESL

Sequences:

>Translated_252_residues
MKYSNLKRIIPLTLLASAATLVVAAPAPVTDLNASSNSTSSAPASSASIERLERLIKSRNQIQLQLQQQLDGLSQELSEM
RGTVERNSYELDQMLERQRQLYIEIDNIRTAKPTVEAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFV
TAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFAKVVSYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST
TAKTAASKLESL
>Mature_252_residues
MKYSNLKRIIPLTLLASAATLVVAAPAPVTDLNASSNSTSSAPASSASIERLERLIKSRNQIQLQLQQQLDGLSQELSEM
RGTVERNSYELDQMLERQRQLYIEIDNIRTAKPTVEAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFV
TAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFAKVVSYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST
TAKTAASKLESL

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=196, Percent_Identity=34.1836734693878, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27801; Mature: 27801

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSNLKRIIPLTLLASAATLVVAAPAPVTDLNASSNSTSSAPASSASIERLERLIKSRN
CCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
QIQLQLQQQLDGLSQELSEMRGTVERNSYELDQMLERQRQLYIEIDNIRTAKPTVEAKPE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCC
ATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWLGQLY
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHEE
FAQKNDVEAAKSFAKVVSYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
TAKTAASKLESL
HHHHHHHHHHCC
>Mature Secondary Structure
MKYSNLKRIIPLTLLASAATLVVAAPAPVTDLNASSNSTSSAPASSASIERLERLIKSRN
CCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH
QIQLQLQQQLDGLSQELSEMRGTVERNSYELDQMLERQRQLYIEIDNIRTAKPTVEAKPE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCC
ATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWLGQLY
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEHHHEE
FAQKNDVEAAKSFAKVVSYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
TAKTAASKLESL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]