| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711489
Identifier: 59711489
GI number: 59711489
Start: 967827
End: 968507
Strand: Direct
Name: 59711489
Synonym: VF_0882
Alternate gene names: NA
Gene position: 967827-968507 (Clockwise)
Preceding gene: 59711488
Following gene: 59711491
Centisome position: 33.4
GC content: 36.42
Gene sequence:
>681_bases ATGAGTAAAGAAAAAAAAGCAGTTGATTATTATCAAGAAATTCAACGAGTAATTAATAGTGCTCTTGGTGATCTACAAGA GTCTAAAGACAGTGGCCGTTTACCTAAAAACCCGGTAAGTGCAAACCACTTTTTAATTCGTTGGGTAACAACTGCAATTA AGTCTCAACGTTTTGCACATTGCGTTGCAAAAGATTTGATGACTTGGCAAAAAGAAGGGCGTACAAAAGGTACTGGTACT CAATTACCTGTGCGTTTTGAACAATACTCTCGTTTATACGCTGAATTAGCACCTGTTGAGCAAGCTGCATCTATTTCTAA ATCTGCGATTATGGCGTGGAGTGAATCACTAGAAGAGAAAGAATGGTGTGTAACAACAGAATATGAAGTATTAGAAAAAG CATCGCTGTTTTCTGACGGTGATCATTCATTCATCATTTGTTCTACTCAACTTGAATCATGCTTTGATGCTGAAAGTGAA GAGTTAATTAAACCACTGACTTGTTATGTTCGTGGTAATCACCATGAGTTTGTTGAATCTGCTTTTGAGCATGGATTAAT GGTGCATAAGCGTTCGGATTACAAATCAAAAGTGAAGTACCATGGAGAGTATTTAATTTATCCTCATAACCACGGTACTC AGTTAGGTGAAATCCCATTTTCATTTAACGTGAAAAAATAA
Upstream 100 bases:
>100_bases AATGTTCCCTTCTGATTCGGCTTGGCCTATGGTAAGTTCCATGGCAGCATGTTCTATATTATCTTTTGGTTGTTATTTTG TGTTTGGACGAAAAGCGTAA
Downstream 100 bases:
>100_bases TCGATTATCGAGATTGGATGGGCTCTTAGTAGAGCCCATTTTTTATTCTTCCTATCCTTATTCCTCTTATCCTTTTTCTT CTTTCTCAGCTTTTTTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSKEKKAVDYYQEIQRVINSALGDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFAHCVAKDLMTWQKEGRTKGTGT QLPVRFEQYSRLYAELAPVEQAASISKSAIMAWSESLEEKEWCVTTEYEVLEKASLFSDGDHSFIICSTQLESCFDAESE ELIKPLTCYVRGNHHEFVESAFEHGLMVHKRSDYKSKVKYHGEYLIYPHNHGTQLGEIPFSFNVKK
Sequences:
>Translated_226_residues MSKEKKAVDYYQEIQRVINSALGDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFAHCVAKDLMTWQKEGRTKGTGT QLPVRFEQYSRLYAELAPVEQAASISKSAIMAWSESLEEKEWCVTTEYEVLEKASLFSDGDHSFIICSTQLESCFDAESE ELIKPLTCYVRGNHHEFVESAFEHGLMVHKRSDYKSKVKYHGEYLIYPHNHGTQLGEIPFSFNVKK >Mature_225_residues SKEKKAVDYYQEIQRVINSALGDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFAHCVAKDLMTWQKEGRTKGTGTQ LPVRFEQYSRLYAELAPVEQAASISKSAIMAWSESLEEKEWCVTTEYEVLEKASLFSDGDHSFIICSTQLESCFDAESEE LIKPLTCYVRGNHHEFVESAFEHGLMVHKRSDYKSKVKYHGEYLIYPHNHGTQLGEIPFSFNVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25934; Mature: 25802
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEKKAVDYYQEIQRVINSALGDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CVAKDLMTWQKEGRTKGTGTQLPVRFEQYSRLYAELAPVEQAASISKSAIMAWSESLEEK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWCVTTEYEVLEKASLFSDGDHSFIICSTQLESCFDAESEELIKPLTCYVRGNHHEFVES HCEECCHHHHHHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHEEEECCHHHHHHH AFEHGLMVHKRSDYKSKVKYHGEYLIYPHNHGTQLGEIPFSFNVKK HHHCCEEEEECCCHHHHHEECCCEEEEECCCCCCCCCCCCEECCCC >Mature Secondary Structure SKEKKAVDYYQEIQRVINSALGDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CVAKDLMTWQKEGRTKGTGTQLPVRFEQYSRLYAELAPVEQAASISKSAIMAWSESLEEK HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWCVTTEYEVLEKASLFSDGDHSFIICSTQLESCFDAESEELIKPLTCYVRGNHHEFVES HCEECCHHHHHHHHHHCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHEEEECCHHHHHHH AFEHGLMVHKRSDYKSKVKYHGEYLIYPHNHGTQLGEIPFSFNVKK HHHCCEEEEECCCHHHHHEECCCEEEEECCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA