| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711463
Identifier: 59711463
GI number: 59711463
Start: 942629
End: 943255
Strand: Direct
Name: 59711463
Synonym: VF_0856
Alternate gene names: NA
Gene position: 942629-943255 (Clockwise)
Preceding gene: 59711462
Following gene: 59711464
Centisome position: 32.53
GC content: 39.23
Gene sequence:
>627_bases ATGCATCATAAGGCCATAAAAGTCCGCCACCTTATAGCGCTTGTTCTATCCTTTCTTTTGATGGGATGTGCAGCAAAACC GGTAAAGCAACCCAACCAAGTAGAAGTATCACAAGGTCAGTTTATTACCTTACCTCAGCCTGAAGAGTATGGCAGTGACT TATCACTTAGTCAGTTAATCTCAGTTGAATGGCAAGGAAAAAAGAATCAACTTCCTGTTCAACTGCAACTGACAGGTAAT GACTTGGTATTAGCTGGCTTTGCCTCATGGGGTTCTCGTTTATTAAGCTTAGATTATGATGGTCAAACATTAGATACTTA CGTAATGGCAGGGCTAAGTGACACGCTACCACCGCCAGAGCAAGTGCTATTTAATGTCATGATTACCTTGTGGCCACTTG AAGCATGGCAAGAAAGTTTAACTAGCATTGGCTGGCAACTAAACGAACATGACAATCATAGAACATTAGTGACTGAATCA GGAAAAACAATCCTTGATGCTCGTTATGATGACATCACAGACAAATTAAGTGGTGAAATTGTGTTAACCAGTCCAGATTT TGGTTATGTCATAAAAATTAAAACGTTCTCGCATTCAAATACAACAACTCAAAATAATAACGGATAA
Upstream 100 bases:
>100_bases ACGGTTCTTACAGGGATTATCGTGGCTTGGTTACTGGCTCCGTTAAGCCAACAAAATAAAGAGAGTAAAGGGTATATTAA TACGCTTTCGGAGAAAAAAG
Downstream 100 bases:
>100_bases ATTAAATGAGTGACTTTCCTTTATATATACATGCGTGTGGCTCACATTCAGCCATGGGTAAAGAGGTTGATGAAATCCAT CAAGTATTGAGTGGAAATAA
Product: phospho-N-acetylmuramoyl-pentapeptide- transferase
Products: UMP; Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-; $diphosphoundecaprenol
Alternate protein names: Phospho-N-Acetylmuramoyl-Pentapeptide-Transferase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG
Sequences:
>Translated_208_residues MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG >Mature_208_residues MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLISVEWQGKKNQLPVQLQLTGN DLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPEQVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTES GKTILDARYDDITDKLSGEIVLTSPDFGYVIKIKTFSHSNTTTQNNNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.13
Molecular weight: Translated: 23163; Mature: 23163
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCHHHEE SVEWQGKKNQLPVQLQLTGNDLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPE EEEECCCCCCCCEEEEECCCCEEEEEEHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCHH QVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTESGKTILDARYDDITDKLSGEI HHHHHHHHHHHCHHHHHHHHHHHCCEECCCCCCEEEEECCCCEEEECCHHHHHHHHCCCE VLTSPDFGYVIKIKTFSHSNTTTQNNNG EEECCCCCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MHHKAIKVRHLIALVLSFLLMGCAAKPVKQPNQVEVSQGQFITLPQPEEYGSDLSLSQLI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCHHHEE SVEWQGKKNQLPVQLQLTGNDLVLAGFASWGSRLLSLDYDGQTLDTYVMAGLSDTLPPPE EEEECCCCCCCCEEEEECCCCEEEEEEHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCHH QVLFNVMITLWPLEAWQESLTSIGWQLNEHDNHRTLVTESGKTILDARYDDITDKLSGEI HHHHHHHHHHHCHHHHHHHHHHHCCEECCCCCCEEEEECCCCEEEECCHHHHHHHHCCCE VLTSPDFGYVIKIKTFSHSNTTTQNNNG EEECCCCCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala); undecaprenyl phosphate
Specific reaction: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala) + undecaprenyl phosphate = UMP + Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D- $Ala-D-Ala)-diphosphoundecaprenol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA