| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711461
Identifier: 59711461
GI number: 59711461
Start: 939602
End: 940222
Strand: Direct
Name: 59711461
Synonym: VF_0854
Alternate gene names: NA
Gene position: 939602-940222 (Clockwise)
Preceding gene: 59711460
Following gene: 59711462
Centisome position: 32.43
GC content: 37.36
Gene sequence:
>621_bases ATGCTTAATGTTAAACGTTATTGGTCATTATTATTGGCATCGTTTGTTATGCTTTTTAGCGTAAATAGCTTTGCATTTAG TGTTGATGACTTGCAGCAGCAACTCGCAAAATCGACGCTTGTTCGTGGTGATTTTAAACAAGTAAGAACCATGCAGATGT TTGCACAACCATTATCGACATCAGGTACTTTTTTGTTGGATCATGAAAAGGGGTTATTGTGGCAACAAACAACGCCTTTT CCGATTGCGTTGACTTTAACGCAGAACAAACTTCGCCAATCCATTAATGGTGACACTCAAGTCATGACGGATTCAGATAA TCCAATGGCGTTTTATTTTACTCGTCTATTTCTATCTCTATTTAAAGGGGATACGGAATCCATTAAAGAAAATTTCACTC TGCAATTAACGGGTGAAAAAGACGCTTGGACACTCATACTTACTCCAACTAAAGCCCCAATTGACAGCGTATTTAAAACC ATAAAAATTGAGGGTAATGATTATTTAAATCGAGTGGTATTAAGTGAAGTGCGAGGTGACGTAACTGAAATGGTATTTAC TAATCAGTCGACAGAACCTGCGACCTTAACAGAAGAAGAGTTACGTGTTTTCGAATTCTAA
Upstream 100 bases:
>100_bases ACTAAAGCCCATACAATGCAAGTAGCGGTAAGCATAGAAACTGAAGAAATGTGCTTTGTTTCTCCTCGTATATTTACCGA TAAAGTAGAGGCTTATCATA
Downstream 100 bases:
>100_bases TTGGATAAAACCACGAGTTTTAGCTCTGGTTTGGGCATTGGCTCTATTAGGAATCGCAGGGGTATTTGGTTATCAATGTA CAACCAAAGGCGCACTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein; Flagellum-Specific ATP Synthase; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF
Sequences:
>Translated_206_residues MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF >Mature_206_residues MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLSTSGTFLLDHEKGLLWQQTTPF PIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSLFKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKT IKIEGNDYLNRVVLSEVRGDVTEMVFTNQSTEPATLTEEELRVFEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23549; Mature: 23549
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLST CCCHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SGTFLLDHEKGLLWQQTTPFPIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSL CCCEEEECCCCCEEECCCCCEEEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH FKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKTIKIEGNDYLNRVVLSEVRGD HCCCHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHEEEECCCHHHHHHHHHHHCCH VTEMVFTNQSTEPATLTEEELRVFEF HHHHHEECCCCCCCCCCHHHHHEECC >Mature Secondary Structure MLNVKRYWSLLLASFVMLFSVNSFAFSVDDLQQQLAKSTLVRGDFKQVRTMQMFAQPLST CCCHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SGTFLLDHEKGLLWQQTTPFPIALTLTQNKLRQSINGDTQVMTDSDNPMAFYFTRLFLSL CCCEEEECCCCCEEECCCCCEEEEEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH FKGDTESIKENFTLQLTGEKDAWTLILTPTKAPIDSVFKTIKIEGNDYLNRVVLSEVRGD HCCCHHHHHCCEEEEEECCCCCEEEEEECCCCCHHHHHHEEEECCCHHHHHHHHHHHCCH VTEMVFTNQSTEPATLTEEELRVFEF HHHHHEECCCCCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA