Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is frsA [C]

Identifier: 59711346

GI number: 59711346

Start: 805954

End: 807192

Strand: Direct

Name: frsA [C]

Synonym: VF_0739

Alternate gene names: 59711346

Gene position: 805954-807192 (Clockwise)

Preceding gene: 59711345

Following gene: 59711347

Centisome position: 27.82

GC content: 39.87

Gene sequence:

>1239_bases
ATGCCTCAACCAGAGAGTGAAAACCTTTCAGTTAAATTGTTTAAAAACCATAAGCAAGCATTAGAGACGTCAGGCTTGGT
TCCTTATCTTCCGAGTAGTTTGGAGCAATTGGAACAAAGTGGGCGTACTTGGTATCGTGAATTACGCCGACCACAATGGA
TATGGCAAGGCGTAGATGCAATAGAGCTTGAATCCATATTGGCTCGTATTGCAAATAGTCAAAAGCATCGTTCTCGTGAT
GAATGGTTAGATACCGTAAGCGGTTATCATTCTGGAAACTGGGCCTATGAATGGATCCATGCGGGAATGGAACATCAAAA
AACGGCTTCGGAACTGGATGGTGATGAGGCAGCAGAAGCGTATTTTAAAGCTAGTTTGTATTTTAGTGTGGCAGGTTATC
CTCATATAAAGGGAGATAATCTAGCAATTCAATCACAAGTGTTAGCTAGTCAAGCCTATGATATGGCAGCAAAACAAACT
TCTCACCGTGTTGAAAAAATACTTGTACCGTATCAGGGAAGAAAAATAACCTGCTATTTGCATTTACCAAATACAGAAAA
ACCATTGCCTGTCGTTATAGTGAGTGGTGGCATGGATTCACTACAAACGGACATGTGGCGTTTGTATCGTGACTTTCTTG
CCCCTAATAATATGGCGATGTTGACATTAGATATGCCATCAATAGGTCATAGTTCTCACTGGCCATTAAGTGAAGATTCA
AGTTGTTTGCATCAAGCTGTATTGAATTATCTTCCGAATATTCCGTGGGTAGATCGTTTTCATGCTGCTGTTATGGGGTT
TCGATTTGGCGGTAATGTCGCATTGCGTCTTTCTTTTTTAGAGCCAAGTCGATTAAAAGCATGTGTTGCATTGGGTGCTC
CTGTACATCAAATTCTGACCAATTCAGCAAGATTAAAAACCATGCCTAAAATGTATCTTGACGTGTTAGCTTCAAGGCTG
GCTAAGCAAGTTGTTGATATAAATAGCCTTACAAGTCAAATGCAAGCATGGTCGCTAAAAAATCAAGGTTTTTTATCTGG
TGGGAGAAAAACATCAGTTTCCGTTTTAGCTATTGGTCTGAAGGATGATCCTGTTTCACCTAAGTCAGATAATAAATTAG
CGGCGCTCTTTAGCAAATATGGCAAAGGTGTTGAGCTAAATAGTAAGACATTACATAGTGGCTATGAAGAAGCATTAAAG
CAGATGATTGAATGGATCAAAGAGGAAATGAAGCAATAG

Upstream 100 bases:

>100_bases
TTTTTTTATTCAAAACTTAATTTTATTCGCTTCTTCATATTCCTTATTCTTCTTTCAGTATATAGTGAGAAGATGAATAT
GTTGTTGATTGGTGGTAGAT

Downstream 100 bases:

>100_bases
TTTCTCTATTTATTAATAGAATTAAAGTGAAATGTTATTAAATGCTATTTTAAGCTTGTACTGTTCTGATTTGCTTGCTA
AAAGTAGTGTCAGTTTTACC

Product: fermentation/respiration switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPQPESENLSVKLFKNHKQALETSGLVPYLPSSLEQLEQSGRTWYRELRRPQWIWQGVDAIELESILARIANSQKHRSRD
EWLDTVSGYHSGNWAYEWIHAGMEHQKTASELDGDEAAEAYFKASLYFSVAGYPHIKGDNLAIQSQVLASQAYDMAAKQT
SHRVEKILVPYQGRKITCYLHLPNTEKPLPVVIVSGGMDSLQTDMWRLYRDFLAPNNMAMLTLDMPSIGHSSHWPLSEDS
SCLHQAVLNYLPNIPWVDRFHAAVMGFRFGGNVALRLSFLEPSRLKACVALGAPVHQILTNSARLKTMPKMYLDVLASRL
AKQVVDINSLTSQMQAWSLKNQGFLSGGRKTSVSVLAIGLKDDPVSPKSDNKLAALFSKYGKGVELNSKTLHSGYEEALK
QMIEWIKEEMKQ

Sequences:

>Translated_412_residues
MPQPESENLSVKLFKNHKQALETSGLVPYLPSSLEQLEQSGRTWYRELRRPQWIWQGVDAIELESILARIANSQKHRSRD
EWLDTVSGYHSGNWAYEWIHAGMEHQKTASELDGDEAAEAYFKASLYFSVAGYPHIKGDNLAIQSQVLASQAYDMAAKQT
SHRVEKILVPYQGRKITCYLHLPNTEKPLPVVIVSGGMDSLQTDMWRLYRDFLAPNNMAMLTLDMPSIGHSSHWPLSEDS
SCLHQAVLNYLPNIPWVDRFHAAVMGFRFGGNVALRLSFLEPSRLKACVALGAPVHQILTNSARLKTMPKMYLDVLASRL
AKQVVDINSLTSQMQAWSLKNQGFLSGGRKTSVSVLAIGLKDDPVSPKSDNKLAALFSKYGKGVELNSKTLHSGYEEALK
QMIEWIKEEMKQ
>Mature_411_residues
PQPESENLSVKLFKNHKQALETSGLVPYLPSSLEQLEQSGRTWYRELRRPQWIWQGVDAIELESILARIANSQKHRSRDE
WLDTVSGYHSGNWAYEWIHAGMEHQKTASELDGDEAAEAYFKASLYFSVAGYPHIKGDNLAIQSQVLASQAYDMAAKQTS
HRVEKILVPYQGRKITCYLHLPNTEKPLPVVIVSGGMDSLQTDMWRLYRDFLAPNNMAMLTLDMPSIGHSSHWPLSEDSS
CLHQAVLNYLPNIPWVDRFHAAVMGFRFGGNVALRLSFLEPSRLKACVALGAPVHQILTNSARLKTMPKMYLDVLASRLA
KQVVDINSLTSQMQAWSLKNQGFLSGGRKTSVSVLAIGLKDDPVSPKSDNKLAALFSKYGKGVELNSKTLHSGYEEALKQ
MIEWIKEEMKQ

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0255 family [H]

Homologues:

Organism=Escherichia coli, GI1786434, Length=412, Percent_Identity=41.504854368932, Blast_Score=318, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010520 [H]

Pfam domain/function: PF06500 DUF1100 [H]

EC number: NA

Molecular weight: Translated: 46373; Mature: 46241

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPESENLSVKLFKNHKQALETSGLVPYLPSSLEQLEQSGRTWYRELRRPQWIWQGVDA
CCCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCH
IELESILARIANSQKHRSRDEWLDTVSGYHSGNWAYEWIHAGMEHQKTASELDGDEAAEA
HHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHH
YFKASLYFSVAGYPHIKGDNLAIQSQVLASQAYDMAAKQTSHRVEKILVPYQGRKITCYL
HHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
HLPNTEKPLPVVIVSGGMDSLQTDMWRLYRDFLAPNNMAMLTLDMPSIGHSSHWPLSEDS
ECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCH
SCLHQAVLNYLPNIPWVDRFHAAVMGFRFGGNVALRLSFLEPSRLKACVALGAPVHQILT
HHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHCCHHHHHHC
NSARLKTMPKMYLDVLASRLAKQVVDINSLTSQMQAWSLKNQGFLSGGRKTSVSVLAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC
KDDPVSPKSDNKLAALFSKYGKGVELNSKTLHSGYEEALKQMIEWIKEEMKQ
CCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQPESENLSVKLFKNHKQALETSGLVPYLPSSLEQLEQSGRTWYRELRRPQWIWQGVDA
CCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCH
IELESILARIANSQKHRSRDEWLDTVSGYHSGNWAYEWIHAGMEHQKTASELDGDEAAEA
HHHHHHHHHHHCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHH
YFKASLYFSVAGYPHIKGDNLAIQSQVLASQAYDMAAKQTSHRVEKILVPYQGRKITCYL
HHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
HLPNTEKPLPVVIVSGGMDSLQTDMWRLYRDFLAPNNMAMLTLDMPSIGHSSHWPLSEDS
ECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCH
SCLHQAVLNYLPNIPWVDRFHAAVMGFRFGGNVALRLSFLEPSRLKACVALGAPVHQILT
HHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHCCHHHHHHC
NSARLKTMPKMYLDVLASRLAKQVVDINSLTSQMQAWSLKNQGFLSGGRKTSVSVLAIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC
KDDPVSPKSDNKLAALFSKYGKGVELNSKTLHSGYEEALKQMIEWIKEEMKQ
CCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA