| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is proB [H]
Identifier: 59711347
GI number: 59711347
Start: 807361
End: 808470
Strand: Direct
Name: proB [H]
Synonym: VF_0740
Alternate gene names: 59711347
Gene position: 807361-808470 (Clockwise)
Preceding gene: 59711346
Following gene: 59711348
Centisome position: 27.86
GC content: 40.72
Gene sequence:
>1110_bases TTGAATACACAATCTCAAACCATAGTCGTTAAACTTGGTACAAGTGTACTCACCGGTGGCACATTAAAATTAGATAGAGC ACATATGGTTGAGTTAGTTCGCCAATGTGTTCAGCTAAAAAAAGCTGGCCATCAAGTTATTGTTGTTACGTCTGGCGCAA TTGCTGCTGGTCGTGAGCATCTTAACTACCCCGAACTACCCAAAACCATGGCTAACAAGCAGTTATTAGCTGCTGTTGGT CAAAGTTGCTTAATTCAAGCGTGGCAAAGTTTGTTTGGTATTTATGGTGTTGACGTAGGTCAAATGCTATTAACTCGAGC TGATTTGGATGACCGTGAGCGTTATTTAAATGCAAGAGATATGCTTCAAGCACTATTAAAAAATAATATCGTTCCTATTG TTAATGAAAATGATGCGGTAGCAACCAATGAAATTAAAGTTGGTGATAACGATAACCTTTCTGCATTAGTCGGTATTTTA GCGGGTGCAGATAAATTATTATTGTTAACAGACCAATCGGGTCTATTTACCGCTGATCCACGTAAAGACCCAAAAGCAGA ACTGATCAAAGAAGTTCATACTATCGATGAAACACTACGCAAGATAGCTGGCGGAAGTGGTACAACTCTTGGTACCGGTG GTATGGCGACGAAGCTGCAAGCTGCTGATGTGGCGCGCCGAGCGGGTATTGAAGTAATTATTGCTGCTGGTAGTGCTGAG AATGTAATTACTGATGTGGTTAACTCTAAACCTCAAGGTACGAAGTTCTTACCTGTTGAGTGTGCTTTAGAGAGCCGTAA ACGTTGGATCTTAGCTGGGCCTCCATCAAAAGGTAGCATTGTTATTGATGAAGGCGCAGTAAATGCGGTTCAACAAAAAG GCAGCAGTTTATTAAGTAAAGGTATCACTGAAGTATCAGGCCATTTCGTTCGTGGTGGCGTAGCGAAAATTGTGAATACA AAAGGTGAATTGATTGCTCGTGGTATTTCACGTTATTCAAGTGATGACTTATCTAAGATTTTAGGAAAACACAGTCAGGA TATTTACGCAGTATTAGGCTACGAATATGGCCCTGTAGCTATCCATCGTGATGATTTAGTACTGATTTAG
Upstream 100 bases:
>100_bases ATTTGCTTGCTAAAAGTAGTGTCAGTTTTACCAACAACGTTACGATGATTATCGTCGTAAAATTTACATCATTTATTTAA GTAAAATAGGTAGTAGGGAA
Downstream 100 bases:
>100_bases TAAAAGGATATATTGTGAATTTAACAACTATGGGTCAAGCAGCTAAAGCCGCTGCATTTGACTTAGCTGTTGCTCCAACA GCGCAAAAGAATAAAGCACT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVQLKKAGHQVIVVTSGAIAAGREHLNYPELPKTMANKQLLAAVG QSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARDMLQALLKNNIVPIVNENDAVATNEIKVGDNDNLSALVGIL AGADKLLLLTDQSGLFTADPRKDPKAELIKEVHTIDETLRKIAGGSGTTLGTGGMATKLQAADVARRAGIEVIIAAGSAE NVITDVVNSKPQGTKFLPVECALESRKRWILAGPPSKGSIVIDEGAVNAVQQKGSSLLSKGITEVSGHFVRGGVAKIVNT KGELIARGISRYSSDDLSKILGKHSQDIYAVLGYEYGPVAIHRDDLVLI
Sequences:
>Translated_369_residues MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVQLKKAGHQVIVVTSGAIAAGREHLNYPELPKTMANKQLLAAVG QSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARDMLQALLKNNIVPIVNENDAVATNEIKVGDNDNLSALVGIL AGADKLLLLTDQSGLFTADPRKDPKAELIKEVHTIDETLRKIAGGSGTTLGTGGMATKLQAADVARRAGIEVIIAAGSAE NVITDVVNSKPQGTKFLPVECALESRKRWILAGPPSKGSIVIDEGAVNAVQQKGSSLLSKGITEVSGHFVRGGVAKIVNT KGELIARGISRYSSDDLSKILGKHSQDIYAVLGYEYGPVAIHRDDLVLI >Mature_369_residues MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVQLKKAGHQVIVVTSGAIAAGREHLNYPELPKTMANKQLLAAVG QSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARDMLQALLKNNIVPIVNENDAVATNEIKVGDNDNLSALVGIL AGADKLLLLTDQSGLFTADPRKDPKAELIKEVHTIDETLRKIAGGSGTTLGTGGMATKLQAADVARRAGIEVIIAAGSAE NVITDVVNSKPQGTKFLPVECALESRKRWILAGPPSKGSIVIDEGAVNAVQQKGSSLLSKGITEVSGHFVRGGVAKIVNT KGELIARGISRYSSDDLSKILGKHSQDIYAVLGYEYGPVAIHRDDLVLI
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=294, Percent_Identity=32.9931972789116, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI62912457, Length=292, Percent_Identity=32.8767123287671, Blast_Score=129, Evalue=3e-30, Organism=Escherichia coli, GI1786437, Length=365, Percent_Identity=68.2191780821918, Blast_Score=504, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17569969, Length=270, Percent_Identity=34.0740740740741, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17569967, Length=270, Percent_Identity=34.0740740740741, Blast_Score=138, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6321822, Length=421, Percent_Identity=36.8171021377672, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320506, Length=419, Percent_Identity=35.799522673031, Blast_Score=217, Evalue=2e-57, Organism=Drosophila melanogaster, GI21357643, Length=307, Percent_Identity=31.9218241042345, Blast_Score=124, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 39328; Mature: 39328
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVQLKKAGHQVIVVTSGAIAAGREH CCCCCCEEEEEECCCEECCCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCHHH LNYPELPKTMANKQLLAAVGQSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCHHH MLQALLKNNIVPIVNENDAVATNEIKVGDNDNLSALVGILAGADKLLLLTDQSGLFTADP HHHHHHHCCCEEEECCCCCEEECEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCEECCC RKDPKAELIKEVHTIDETLRKIAGGSGTTLGTGGMATKLQAADVARRAGIEVIIAAGSAE CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEEECCCCH NVITDVVNSKPQGTKFLPVECALESRKRWILAGPPSKGSIVIDEGAVNAVQQKGSSLLSK HHHHHHHCCCCCCCEEEEHHHHHCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHH GITEVSGHFVRGGVAKIVNTKGELIARGISRYSSDDLSKILGKHSQDIYAVLGYEYGPVA CHHHHCCHHHHCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCEE IHRDDLVLI EECCCEEEC >Mature Secondary Structure MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVQLKKAGHQVIVVTSGAIAAGREH CCCCCCEEEEEECCCEECCCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCHHH LNYPELPKTMANKQLLAAVGQSCLIQAWQSLFGIYGVDVGQMLLTRADLDDRERYLNARD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCHHH MLQALLKNNIVPIVNENDAVATNEIKVGDNDNLSALVGILAGADKLLLLTDQSGLFTADP HHHHHHHCCCEEEECCCCCEEECEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCEECCC RKDPKAELIKEVHTIDETLRKIAGGSGTTLGTGGMATKLQAADVARRAGIEVIIAAGSAE CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCEEEEECCCCH NVITDVVNSKPQGTKFLPVECALESRKRWILAGPPSKGSIVIDEGAVNAVQQKGSSLLSK HHHHHHHCCCCCCCEEEEHHHHHCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHHHHH GITEVSGHFVRGGVAKIVNTKGELIARGISRYSSDDLSKILGKHSQDIYAVLGYEYGPVA CHHHHCCHHHHCCHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCEE IHRDDLVLI EECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA