| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is bolA [H]
Identifier: 59711331
GI number: 59711331
Start: 791029
End: 791343
Strand: Direct
Name: bolA [H]
Synonym: VF_0724
Alternate gene names: 59711331
Gene position: 791029-791343 (Clockwise)
Preceding gene: 59711323
Following gene: 59711332
Centisome position: 27.3
GC content: 38.1
Gene sequence:
>315_bases ATGATTCAGCATCAAATTGAACAAAAATTACGCGAAGCGTTAGCGCCTTCTTATCTTAAAGTTCTAAATGAAAGCTATAT GCATAACGTACCTGAAGGTTCTGAAAGCCATTTTAAGGTAATTGTAGTGAGCGACGAATTTGAAGGTAAACGTTTGATTG CTCGCCATCGAGCTATTAATAACATTTTAGCTGAAGAATTGTCAGATCATATTCATGCTTTAGCCATTCATACGTATACA GAAACAGAATGGCAAGCTCTAGATGCAGAGCAAGTTCCTCTTAGTCCCAACTGTATGGGCGGTGGAAAAGGTTAA
Upstream 100 bases:
>100_bases TTCATAATGATTTGATCTTCAAATAGGGAAGGCTTCTAGCTATTGTCGCAAATGGTGTATAAAGTGGAAACAGAAGAATT CAAATAAAGAAAGGAATTAT
Downstream 100 bases:
>100_bases AAATGAAACGCTAATGTTTATTTTTTAACATAAAATAAATATAAAATAAGTCTGTTTGTTAAAAAATGACTAATATTTAA TGTCATTGCTACTTATGGGG
Product: regulator of penicillin binding proteins and beta lactamase transcription (morphogene)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MIQHQIEQKLREALAPSYLKVLNESYMHNVPEGSESHFKVIVVSDEFEGKRLIARHRAINNILAEELSDHIHALAIHTYT ETEWQALDAEQVPLSPNCMGGGKG
Sequences:
>Translated_104_residues MIQHQIEQKLREALAPSYLKVLNESYMHNVPEGSESHFKVIVVSDEFEGKRLIARHRAINNILAEELSDHIHALAIHTYT ETEWQALDAEQVPLSPNCMGGGKG >Mature_104_residues MIQHQIEQKLREALAPSYLKVLNESYMHNVPEGSESHFKVIVVSDEFEGKRLIARHRAINNILAEELSDHIHALAIHTYT ETEWQALDAEQVPLSPNCMGGGKG
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=102, Percent_Identity=47.0588235294118, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI87081740, Length=102, Percent_Identity=57.843137254902, Blast_Score=124, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17541430, Length=96, Percent_Identity=48.9583333333333, Blast_Score=99, Evalue=5e-22, Organism=Drosophila melanogaster, GI221459039, Length=105, Percent_Identity=44.7619047619048, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI78707212, Length=85, Percent_Identity=37.6470588235294, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 11731; Mature: 11731
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQHQIEQKLREALAPSYLKVLNESYMHNVPEGSESHFKVIVVSDEFEGKRLIARHRAIN CCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH NILAEELSDHIHALAIHTYTETEWQALDAEQVPLSPNCMGGGKG HHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQHQIEQKLREALAPSYLKVLNESYMHNVPEGSESHFKVIVVSDEFEGKRLIARHRAIN CCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH NILAEELSDHIHALAIHTYTETEWQALDAEQVPLSPNCMGGGKG HHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7805867 [H]