| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is nanT [H]
Identifier: 59711275
GI number: 59711275
Start: 731756
End: 733273
Strand: Direct
Name: nanT [H]
Synonym: VF_0668
Alternate gene names: 59711275
Gene position: 731756-733273 (Clockwise)
Preceding gene: 59711274
Following gene: 59711276
Centisome position: 25.25
GC content: 38.93
Gene sequence:
>1518_bases ATGGAAGCACAATCATTTGGTACATTAAATTACATTGCTCTCTTTGCCTATCTAGGGGCAATTATGGCAGTGGGTGTTTA TTTTGCTCGTCGTCAAAAGTCAGCTGATGATTACTTTAAAGCTGGGGGAAGGATCCCCGGTTGGGCTGCTGGTTTCAGTG TATTTGCAACAACTTTAAGCTCTATTACCTTTATGTCTATTCCGGCAAAAGCGTATACAAGTGACTGGACTTTCTTAATT GGTCAGTATGTCGCTATTGCTATTCTTCCTATCGTTTTTTGGTTCTATATTCCCTTTTTTAGAAAGCTAAATCTGACTTC TGTATATGAATACTTAGAAAGACGTTTTGATGTAAGAATGCGCTTATTCGGTAGTATTTCTTTCATGCTTTTCCATATTG GTCGTATTGCTATTGTTACCTATTTAACGGCGTTGGCGTTAATGCCATTCATTGATATTAGCCCGTTAATGATTGTGTTC TTAATTGGTGTTCTTTGTATTATTTATACCTTCCTTGGTGGTATCGAAGGGGTAATTTGGACCGATGTAATTCAAGGTGT AATGCTTTCTGTTGCTGCCATTCTTATCTTTGTTGTTATTTGCTTTAATGTGGATGGCGGTATTGTTGAAGTGTTTAGCA TGTCGAACCAAGCGGATAAATATTTCCCTGCAGAGCAATTTAGCTGGAGCTGGACGGACAGTACGATTCCAGTATTAATG ATTGGTTTCTTCTTTGCTTCATTACAACAATTTACAGCGAGCCAAGATGTGGTTCAGCGCTACATTGTGACTGACAATAT TGATGAGACTAAAAAAGCATTGATCACTAATGCGAAATTAGTGGCTTGTGTTCCTATTTTCTTCTTCGCTGTAGGTTCTG CATTATTTGCTTACTACACTCAAAATCCAGAGCTGCTTCCTGAGAACTTTAACACGGGCGGTATTCTACCTTTCTACGTT ATTTCTCAAATGCCTGTTGGGGTTGCTGGTCTAATTATCGCAGCGATATTTGCAGCGTCACAATCAAGTATTTCAAGTAG TTTAAATAGTATTGCAGCGTGTTTTACTTCTGACATTTATGAAAAAGTGAGCAAGAACCCAACCTCAGAGCAGAAGCTAA GAATTGGTCGAACACTAACTGTTGTTGCTGGTCTTTTAGGTGTCGTCGCTTCAACATACTTAATTATGTCTAACGAAAGT GAAATTTGGGATGCGTTCAATAGCTTACTTGGCTTAATGGGTGGCCCAATGACAGGACTATTTATGCTTGGTATCTTTGT TCGTCGTGCAAATGCAAACAGTGCGTTATTAGGTGTAGTTGCAAGTATCGCTACCGTACTGTGGGTTCGCTCTGCAACAG ATTTAAACTTCTTCTTCTATGGTGTTATCGGTACTTTGATGGTGGTTATTGTGGGTTACCTAACCGCACCAATGTTTAAG AATAATTTAAACAGTGATGAAATTGATGAGCTAAGTGCAACAAAAGAAAAGCGTTCAACCACTGCTGAAAAAGCGTAA
Upstream 100 bases:
>100_bases GATTGATTGGTGTCGCTCATTGGGCTAGCAAAATACGTTAAAAAAGAACTTCTAAGAAATAGTAATTTAACCCTACAAAA ATTATACAAGGTATATTCCG
Downstream 100 bases:
>100_bases TTGATAATTGAGTTTGAGCCTTTGTTTTTATAAAGGCTCTTTTAAGGACAGTGTTATGATTTATGGTCATATTGAGCACC AAAAAACAAATCAGTATTTA
Product: N-acetylneuraminate transporter, sodium-glucose/galactose cotransporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MEAQSFGTLNYIALFAYLGAIMAVGVYFARRQKSADDYFKAGGRIPGWAAGFSVFATTLSSITFMSIPAKAYTSDWTFLI GQYVAIAILPIVFWFYIPFFRKLNLTSVYEYLERRFDVRMRLFGSISFMLFHIGRIAIVTYLTALALMPFIDISPLMIVF LIGVLCIIYTFLGGIEGVIWTDVIQGVMLSVAAILIFVVICFNVDGGIVEVFSMSNQADKYFPAEQFSWSWTDSTIPVLM IGFFFASLQQFTASQDVVQRYIVTDNIDETKKALITNAKLVACVPIFFFAVGSALFAYYTQNPELLPENFNTGGILPFYV ISQMPVGVAGLIIAAIFAASQSSISSSLNSIAACFTSDIYEKVSKNPTSEQKLRIGRTLTVVAGLLGVVASTYLIMSNES EIWDAFNSLLGLMGGPMTGLFMLGIFVRRANANSALLGVVASIATVLWVRSATDLNFFFYGVIGTLMVVIVGYLTAPMFK NNLNSDEIDELSATKEKRSTTAEKA
Sequences:
>Translated_505_residues MEAQSFGTLNYIALFAYLGAIMAVGVYFARRQKSADDYFKAGGRIPGWAAGFSVFATTLSSITFMSIPAKAYTSDWTFLI GQYVAIAILPIVFWFYIPFFRKLNLTSVYEYLERRFDVRMRLFGSISFMLFHIGRIAIVTYLTALALMPFIDISPLMIVF LIGVLCIIYTFLGGIEGVIWTDVIQGVMLSVAAILIFVVICFNVDGGIVEVFSMSNQADKYFPAEQFSWSWTDSTIPVLM IGFFFASLQQFTASQDVVQRYIVTDNIDETKKALITNAKLVACVPIFFFAVGSALFAYYTQNPELLPENFNTGGILPFYV ISQMPVGVAGLIIAAIFAASQSSISSSLNSIAACFTSDIYEKVSKNPTSEQKLRIGRTLTVVAGLLGVVASTYLIMSNES EIWDAFNSLLGLMGGPMTGLFMLGIFVRRANANSALLGVVASIATVLWVRSATDLNFFFYGVIGTLMVVIVGYLTAPMFK NNLNSDEIDELSATKEKRSTTAEKA >Mature_505_residues MEAQSFGTLNYIALFAYLGAIMAVGVYFARRQKSADDYFKAGGRIPGWAAGFSVFATTLSSITFMSIPAKAYTSDWTFLI GQYVAIAILPIVFWFYIPFFRKLNLTSVYEYLERRFDVRMRLFGSISFMLFHIGRIAIVTYLTALALMPFIDISPLMIVF LIGVLCIIYTFLGGIEGVIWTDVIQGVMLSVAAILIFVVICFNVDGGIVEVFSMSNQADKYFPAEQFSWSWTDSTIPVLM IGFFFASLQQFTASQDVVQRYIVTDNIDETKKALITNAKLVACVPIFFFAVGSALFAYYTQNPELLPENFNTGGILPFYV ISQMPVGVAGLIIAAIFAASQSSISSSLNSIAACFTSDIYEKVSKNPTSEQKLRIGRTLTVVAGLLGVVASTYLIMSNES EIWDAFNSLLGLMGGPMTGLFMLGIFVRRANANSALLGVVASIATVLWVRSATDLNFFFYGVIGTLMVVIVGYLTAPMFK NNLNSDEIDELSATKEKRSTTAEKA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI256985183, Length=467, Percent_Identity=28.051391862955, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI167466278, Length=460, Percent_Identity=29.7826086956522, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI4507035, Length=466, Percent_Identity=26.8240343347639, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI157671931, Length=470, Percent_Identity=26.3829787234043, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI14140236, Length=479, Percent_Identity=23.3820459290188, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI4507031, Length=455, Percent_Identity=25.2747252747253, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI109659836, Length=480, Percent_Identity=23.9583333333333, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI109659839, Length=490, Percent_Identity=23.0612244897959, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI17941285, Length=447, Percent_Identity=23.9373601789709, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI206597483, Length=447, Percent_Identity=23.0425055928412, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI110835708, Length=459, Percent_Identity=22.8758169934641, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI206597487, Length=374, Percent_Identity=23.5294117647059, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI4507033, Length=458, Percent_Identity=21.8340611353712, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790113, Length=473, Percent_Identity=21.3530655391121, Blast_Score=82, Evalue=9e-17, Organism=Caenorhabditis elegans, GI115533094, Length=457, Percent_Identity=26.4770240700219, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI32566512, Length=363, Percent_Identity=26.4462809917355, Blast_Score=115, Evalue=7e-26, Organism=Caenorhabditis elegans, GI115533096, Length=316, Percent_Identity=27.2151898734177, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24645928, Length=466, Percent_Identity=30.0429184549356, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24651739, Length=464, Percent_Identity=27.3706896551724, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI221459584, Length=469, Percent_Identity=28.7846481876333, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI221459588, Length=586, Percent_Identity=26.2798634812287, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28573698, Length=444, Percent_Identity=26.5765765765766, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI221459586, Length=478, Percent_Identity=26.9874476987448, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI281362918, Length=467, Percent_Identity=26.9807280513919, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24640370, Length=484, Percent_Identity=26.4462809917355, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI24651741, Length=452, Percent_Identity=26.5486725663717, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI281362054, Length=458, Percent_Identity=27.292576419214, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI281362052, Length=458, Percent_Identity=27.292576419214, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI281362050, Length=458, Percent_Identity=27.292576419214, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24648056, Length=458, Percent_Identity=27.292576419214, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI21356827, Length=458, Percent_Identity=27.292576419214, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24641117, Length=457, Percent_Identity=27.7899343544858, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI28574994, Length=454, Percent_Identity=26.8722466960352, Blast_Score=135, Evalue=9e-32, Organism=Drosophila melanogaster, GI24650192, Length=499, Percent_Identity=24.6492985971944, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI221459582, Length=483, Percent_Identity=27.3291925465839, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI161076631, Length=506, Percent_Identity=26.4822134387352, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI221379702, Length=478, Percent_Identity=24.8953974895398, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI281364280, Length=494, Percent_Identity=24.0890688259109, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI19920916, Length=494, Percent_Identity=26.5182186234818, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 55565; Mature: 55565
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAQSFGTLNYIALFAYLGAIMAVGVYFARRQKSADDYFKAGGRIPGWAAGFSVFATTLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH SITFMSIPAKAYTSDWTFLIGQYVAIAILPIVFWFYIPFFRKLNLTSVYEYLERRFDVRM HHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLFGSISFMLFHIGRIAIVTYLTALALMPFIDISPLMIVFLIGVLCIIYTFLGGIEGVIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TDVIQGVMLSVAAILIFVVICFNVDGGIVEVFSMSNQADKYFPAEQFSWSWTDSTIPVLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHH IGFFFASLQQFTASQDVVQRYIVTDNIDETKKALITNAKLVACVPIFFFAVGSALFAYYT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC QNPELLPENFNTGGILPFYVISQMPVGVAGLIIAAIFAASQSSISSSLNSIAACFTSDIY CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKVSKNPTSEQKLRIGRTLTVVAGLLGVVASTYLIMSNESEIWDAFNSLLGLMGGPMTGL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH FMLGIFVRRANANSALLGVVASIATVLWVRSATDLNFFFYGVIGTLMVVIVGYLTAPMFK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NNLNSDEIDELSATKEKRSTTAEKA CCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEAQSFGTLNYIALFAYLGAIMAVGVYFARRQKSADDYFKAGGRIPGWAAGFSVFATTLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH SITFMSIPAKAYTSDWTFLIGQYVAIAILPIVFWFYIPFFRKLNLTSVYEYLERRFDVRM HHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLFGSISFMLFHIGRIAIVTYLTALALMPFIDISPLMIVFLIGVLCIIYTFLGGIEGVIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TDVIQGVMLSVAAILIFVVICFNVDGGIVEVFSMSNQADKYFPAEQFSWSWTDSTIPVLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHH IGFFFASLQQFTASQDVVQRYIVTDNIDETKKALITNAKLVACVPIFFFAVGSALFAYYT HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC QNPELLPENFNTGGILPFYVISQMPVGVAGLIIAAIFAASQSSISSSLNSIAACFTSDIY CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKVSKNPTSEQKLRIGRTLTVVAGLLGVVASTYLIMSNESEIWDAFNSLLGLMGGPMTGL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH FMLGIFVRRANANSALLGVVASIATVLWVRSATDLNFFFYGVIGTLMVVIVGYLTAPMFK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NNLNSDEIDELSATKEKRSTTAEKA CCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]