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The map label for this gene is 59711263

Identifier: 59711263

GI number: 59711263

Start: 721174

End: 721659

Strand: Direct

Name: 59711263

Synonym: VF_0656

Alternate gene names: NA

Gene position: 721174-721659 (Clockwise)

Preceding gene: 59711261

Following gene: 59711267

Centisome position: 24.89

GC content: 39.09

Gene sequence:

>486_bases
ATGATAAATAAAGAAGCATTATTAGATTCGATTATTGATGAGTTGCGCAAGATCCATCAACTAGCGTTGGATGCTACTCA
AAGAGCGATTGACCAAGCAACAGATAAAGAAGCGATAGCTCGAAGTAAGTATGAGACGTTTGGTTTAGAAGCTTCTTATT
TGGCACATGGACAAGCGGTTAGGGTTTCTGAATGTGAGGCTGATATCTTAGCTTATCGAAAATTACCAAGGTTGGTTTAT
ACAGAAAACAGCAGCATTAACCAAGGTGCTTTGGTTACGCTAGTGAATCAAGATGATGTTGAAAGTACTTTTTTTATTGG
TCCATCGGCAGGTGGAGTGAAAGTGGCTCATCAAGACTTAGTGTTTTCATTGATTACGCCATCTGCACCATTAGGAAAAG
CAATGATAGGGCAGCAGGTTGGGGATGAATTTGAATTGAACTTAGCTGGGAAAAAACAGCAATACGAAATTATTGATGTT
CAGTGA

Upstream 100 bases:

>100_bases
CTTTTTAGAAAGAGTTCACACTAAAAAATGCGATTTGAATTTAAAGCGTTACTCTTTATTTTTGCTATCATAAGCGGCTC
TATTTTATGGGCTAGATAAG

Downstream 100 bases:

>100_bases
TTTTTTGGATCAAAAAAAGAGAGGCGAACCTCTCTTTTAAAATTTCATTTAGGCGGTGTAATTAAACATTAGGAACAGCG
ATTTGACCATTAGTCAGCTG

Product: transcription elongation factor

Products: NA

Alternate protein names: Transcription Elongation Factor; Transcriptional Elongation Factor

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLEASYLAHGQAVRVSECEADILAYRKLPRLVY
TENSSINQGALVTLVNQDDVESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAMIGQQVGDEFELNLAGKKQQYEIIDV
Q

Sequences:

>Translated_161_residues
MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLEASYLAHGQAVRVSECEADILAYRKLPRLVY
TENSSINQGALVTLVNQDDVESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAMIGQQVGDEFELNLAGKKQQYEIIDV
Q
>Mature_161_residues
MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLEASYLAHGQAVRVSECEADILAYRKLPRLVY
TENSSINQGALVTLVNQDDVESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAMIGQQVGDEFELNLAGKKQQYEIIDV
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17663; Mature: 17663

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLEASYLAHGQAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCEE
RVSECEADILAYRKLPRLVYTENSSINQGALVTLVNQDDVESTFFIGPSAGGVKVAHQDL
EHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEHHHHH
VFSLITPSAPLGKAMIGQQVGDEFELNLAGKKQQYEIIDVQ
HHHEECCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLEASYLAHGQAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCEE
RVSECEADILAYRKLPRLVYTENSSINQGALVTLVNQDDVESTFFIGPSAGGVKVAHQDL
EHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEHHHHH
VFSLITPSAPLGKAMIGQQVGDEFELNLAGKKQQYEIIDVQ
HHHEECCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA