| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is engA [H]
Identifier: 59711240
GI number: 59711240
Start: 689442
End: 690944
Strand: Direct
Name: engA [H]
Synonym: VF_0633
Alternate gene names: 59711240
Gene position: 689442-690944 (Clockwise)
Preceding gene: 59711239
Following gene: 59711241
Centisome position: 23.79
GC content: 41.32
Gene sequence:
>1503_bases ATGATTCCTGTTGTTGCTCTGGTAGGGCGTCCAAATGTTGGTAAATCGACGCTATTTAACCGTCTTACACGCACAAGGGA TGCATTAGTTGCTGACTTTCCTGGTTTAACTCGTGACCGTAAATACGGACGAGCTAAGTTAGAAGAGCAAGAATTCATTC TGATTGATACCGGCGGTATCGATGGAACAGAACAAGGCGTTGAAACTAAAATGGCAGAACAGTCATTAGCTGCAATTGAA GAAGCTGATGTTGTGCTATTTATGGTTGATGGTCGTGCTGGTTTAACATCTGCAGATGAAGCCATCGCAAAACACTTACG TTCACGTGAAAAGCCAACGTTCTTAGTGGTTAACAAGATCGATGGTATTGATGCAGATGCTGCAAGTGCAGAGTTCTGGC AATTAGGTATGAACAAAGTATACCAAATTGCAGCTTCACACGGTCGTGGTGTAACGTCTTTACTTGAACTTGCTCTAGCT CCTTTTATGGAAGAGCTTGTTGAAGAGTCTTTGAAAGATGAAAACGGTGAAATCACTGATTTAACTGAATTTGAAGATTT TGAAGACGAAGAGAAAGATCTAACTGAAGAAGATGCAGAGAAAGATTTTGCTCGCCTTCAGGATCAACCGATTAAACTTG CTATCATTGGCCGTCCAAACGTAGGTAAATCGACACTGACTAACCGTATTCTTGGTGAAGAACGTGTGGTGGTTTACGAT ATGCCTGGTACAACTCGTGACTCTATTTACATTCCTATGGAACGTGAAGGTCAAGAATACGTATTAATTGATACTGCGGG TGTTCGTCGTCGTGGCCGTATTAACGAAACCGTAGAAAAATTCTCTGTAATCAAAACATTAAAAGCCGTTGAAGATGCAA ACGTTGTTCTACTGGTGATTGATGCTCGTGAAAACATCTCAGATCAAGATTTAAGTCTACTTGGCTTTGCACTGAATGCG GGTCGTTCATTAGTAATTGCTGTGAACAAGTGGGATGGTTTAGATAACGATGTGAAAGAAAAAGTAAAATCTGAACTTGA TCGCCGTTTAGGTTTTGTTGATTTTGCTCGTATTCACTTTATTTCTGCACTACACGGTACAGGTGTTGGTCACTTGTATG AATCGGTTCAAGAAGCATACGTTTCTGCGACTAAGCGTGTTGGTACTTCTGTTTTAACTCGTATCATGAAAATGGCACAA GATGATCACCAACCACCATTGGTTCGTGGCCGTCGTGTGAAGCTAAAATACGCTCACGCAGGTGGTTACAATCCACCGCT TATCGTTATTCACGGTAACCAAGTGAAAGAATTACCATCTTCATACAAACGTTTCTTAATGAACTACTACCGTAAGTCTT TAGAAATTATGGGCACTCCAATTCGTATTCAATTCCAGAATAGCGAAAACCCATTTGAAGATCGTGGTGGCAAACTAACT ATGTCGCAAGAGCGTCAACGCAAGCGTCTGTTAGGTGCAGTGAAAAACCGCAACAAGAAGTAA
Upstream 100 bases:
>100_bases ATCCAATTTGGTGATGGCTTTATGTGTAATCAATCAGTCAAAACCATCATCAAATTGGTATTAGCTCGCGCTATGCCTAT GATTAAATAAAGAGGTATAT
Downstream 100 bases:
>100_bases TCCAGAGTTACGTTCTTAAATGTATATTAAATAATAAAACGCCCATCTAGTTGTTGGGCGTTTTTTTTAGGTAAAAATCA TGACTCAATTAGCAGCAACT
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGIDGTEQGVETKMAEQSLAAIE EADVVLFMVDGRAGLTSADEAIAKHLRSREKPTFLVVNKIDGIDADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALA PFMEELVEESLKDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD MPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVIKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNA GRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIMKMAQ DDHQPPLVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNYYRKSLEIMGTPIRIQFQNSENPFEDRGGKLT MSQERQRKRLLGAVKNRNKK
Sequences:
>Translated_500_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGIDGTEQGVETKMAEQSLAAIE EADVVLFMVDGRAGLTSADEAIAKHLRSREKPTFLVVNKIDGIDADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALA PFMEELVEESLKDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD MPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVIKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNA GRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIMKMAQ DDHQPPLVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNYYRKSLEIMGTPIRIQFQNSENPFEDRGGKLT MSQERQRKRLLGAVKNRNKK >Mature_500_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGIDGTEQGVETKMAEQSLAAIE EADVVLFMVDGRAGLTSADEAIAKHLRSREKPTFLVVNKIDGIDADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALA PFMEELVEESLKDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD MPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVIKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNA GRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIMKMAQ DDHQPPLVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNYYRKSLEIMGTPIRIQFQNSENPFEDRGGKLT MSQERQRKRLLGAVKNRNKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=499, Percent_Identity=74.1482965931864, Blast_Score=741, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=133, Percent_Identity=33.8345864661654, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1788919, Length=124, Percent_Identity=33.0645161290323, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17507259, Length=125, Percent_Identity=31.2, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=205, Percent_Identity=28.2926829268293, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 56063; Mature: 56063
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCC DGTEQGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSREKPTFLVVNKI CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECC DGIDADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALAPFMEELVEESLKDENGEITD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEE MPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVIKTLKAVEDANVVLLVI CCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE DARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHF ECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIMKMAQDDHQPPLVRGRRVKLKYAHA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC GGYNPPLIVIHGNQVKELPSSYKRFLMNYYRKSLEIMGTPIRIQFQNSENPFEDRGGKLT CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCEEE MSQERQRKRLLGAVKNRNKK EHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCC DGTEQGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSREKPTFLVVNKI CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECC DGIDADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALAPFMEELVEESLKDENGEITD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEE MPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVIKTLKAVEDANVVLLVI CCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE DARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHF ECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH ISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIMKMAQDDHQPPLVRGRRVKLKYAHA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC GGYNPPLIVIHGNQVKELPSSYKRFLMNYYRKSLEIMGTPIRIQFQNSENPFEDRGGKLT CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCEEE MSQERQRKRLLGAVKNRNKK EHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA