Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711241

Identifier: 59711241

GI number: 59711241

Start: 691024

End: 691899

Strand: Direct

Name: 59711241

Synonym: VF_0634

Alternate gene names: NA

Gene position: 691024-691899 (Clockwise)

Preceding gene: 59711240

Following gene: 59711242

Centisome position: 23.85

GC content: 36.87

Gene sequence:

>876_bases
ATGACTCAATTAGCAGCAACTGAAATTTTATTTTGTCATAACACATGGCAATCAGACTCCACTGTGCAACTTATCAAAGA
AACAGAGCAAGGAAAGTGGATTATTACTAAAGCGACGCCATTTCATCCTGTTAGCCATATTTGGCCAGATCACCCAGAAG
ATAAAGGTGTAATACTGATTAATAACGAAGAATACTCAGTACTTGCTTGTCAAACTGGAGCTATAGAACTTGCTACAGGT
GAGCTTTATATTGGAAAAGATATTCCAATTAAACGTGGCGAAGAGGGATGGGTCTTTGTTGTTTCGCATTTAATCTCTAA
AGATGCGGATATAGCAGTAGAAAATACTGTTACTTTGCGTGTTGATGAGGAGTATCAAAAAGCATTAAGTCGTGGTCATA
GTGCAGGGCATATTGCTTATTTAGCACTAAATAAAGTGCTTCATGCTAACTACTGGCGTAAAGATGCTGATAGAAAAGAC
GAATTAGGCCACTATAATTTTAATAGCTATGCGCAAGAAACTAGCTTTGTATCTGAAGATCATTGTGAAGATGTATATCG
TTTAGGTAAAACATTACGTAAGCGTGGTCTTAATAGCGCAGAGATGATGGCGGATCTTAAGACAATAGAAGAAGCAGTCA
ATCATCAAATTATTGAGTGGCTTGCCCTAGAAAGTCAAGTAACTATGCAATGTGATGGTAAAGCGTTAACCGATTCACGT
TACTGGATAGTAGATTTTGGTATAGATGGAATAGCAAAACTTCCTTGTGGTGGTACGCATGTTAGTTCATTTAAAGAATA
CGCAACAATTATTGTCAAATTGGAAGAGAAAAGTGAGCAAGAGCTCCTTATGCTAACAACATCGATTAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAACCGCAACAAGAAGTAATCCAGAGTTACGTTCTTAAATGTATATTAAATAATAAAACGCCCATCTAGTTGTTGGGC
GTTTTTTTTAGGTAAAAATC

Downstream 100 bases:

>100_bases
TCTAAAAAATGGAAATTACATTCCATGTATATTTCATTCTGCATTTTGTGTAATTAGAGTATTTTTCACTGAAAATCATA
AGCCAAAGAATGATTGATGT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTQLAATEILFCHNTWQSDSTVQLIKETEQGKWIITKATPFHPVSHIWPDHPEDKGVILINNEEYSVLACQTGAIELATG
ELYIGKDIPIKRGEEGWVFVVSHLISKDADIAVENTVTLRVDEEYQKALSRGHSAGHIAYLALNKVLHANYWRKDADRKD
ELGHYNFNSYAQETSFVSEDHCEDVYRLGKTLRKRGLNSAEMMADLKTIEEAVNHQIIEWLALESQVTMQCDGKALTDSR
YWIVDFGIDGIAKLPCGGTHVSSFKEYATIIVKLEEKSEQELLMLTTSIKK

Sequences:

>Translated_291_residues
MTQLAATEILFCHNTWQSDSTVQLIKETEQGKWIITKATPFHPVSHIWPDHPEDKGVILINNEEYSVLACQTGAIELATG
ELYIGKDIPIKRGEEGWVFVVSHLISKDADIAVENTVTLRVDEEYQKALSRGHSAGHIAYLALNKVLHANYWRKDADRKD
ELGHYNFNSYAQETSFVSEDHCEDVYRLGKTLRKRGLNSAEMMADLKTIEEAVNHQIIEWLALESQVTMQCDGKALTDSR
YWIVDFGIDGIAKLPCGGTHVSSFKEYATIIVKLEEKSEQELLMLTTSIKK
>Mature_290_residues
TQLAATEILFCHNTWQSDSTVQLIKETEQGKWIITKATPFHPVSHIWPDHPEDKGVILINNEEYSVLACQTGAIELATGE
LYIGKDIPIKRGEEGWVFVVSHLISKDADIAVENTVTLRVDEEYQKALSRGHSAGHIAYLALNKVLHANYWRKDADRKDE
LGHYNFNSYAQETSFVSEDHCEDVYRLGKTLRKRGLNSAEMMADLKTIEEAVNHQIIEWLALESQVTMQCDGKALTDSRY
WIVDFGIDGIAKLPCGGTHVSSFKEYATIIVKLEEKSEQELLMLTTSIKK

Specific function: Unknown

COG id: COG2872

COG function: function code R; Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32927; Mature: 32795

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLAATEILFCHNTWQSDSTVQLIKETEQGKWIITKATPFHPVSHIWPDHPEDKGVILI
CCCCCCEEEEEEECCCCCCCHHHHEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCEEEE
NNEEYSVLACQTGAIELATGELYIGKDIPIKRGEEGWVFVVSHLISKDADIAVENTVTLR
ECCCEEEEEEECCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECEEEEE
VDEEYQKALSRGHSAGHIAYLALNKVLHANYWRKDADRKDELGHYNFNSYAQETSFVSED
ECHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHH
HCEDVYRLGKTLRKRGLNSAEMMADLKTIEEAVNHQIIEWLALESQVTMQCDGKALTDSR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCE
YWIVDFGIDGIAKLPCGGTHVSSFKEYATIIVKLEEKSEQELLMLTTSIKK
EEEEEECCCCCEECCCCCCHHHHHHHEEEEEEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure 
TQLAATEILFCHNTWQSDSTVQLIKETEQGKWIITKATPFHPVSHIWPDHPEDKGVILI
CCCCCEEEEEEECCCCCCCHHHHEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCEEEE
NNEEYSVLACQTGAIELATGELYIGKDIPIKRGEEGWVFVVSHLISKDADIAVENTVTLR
ECCCEEEEEEECCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEECEEEEE
VDEEYQKALSRGHSAGHIAYLALNKVLHANYWRKDADRKDELGHYNFNSYAQETSFVSED
ECHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHH
HCEDVYRLGKTLRKRGLNSAEMMADLKTIEEAVNHQIIEWLALESQVTMQCDGKALTDSR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCE
YWIVDFGIDGIAKLPCGGTHVSSFKEYATIIVKLEEKSEQELLMLTTSIKK
EEEEEECCCCCEECCCCCCHHHHHHHEEEEEEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA