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The map label for this gene is lamB [H]

Identifier: 59711216

GI number: 59711216

Start: 668239

End: 669516

Strand: Direct

Name: lamB [H]

Synonym: VF_0609

Alternate gene names: 59711216

Gene position: 668239-669516 (Clockwise)

Preceding gene: 59711215

Following gene: 59711219

Centisome position: 23.06

GC content: 38.89

Gene sequence:

>1278_bases
ATGAAATTATTACCTGTTGCTCTGGCTGTTACAGCGACTCTTTCTTCATTTTCTACTTTTGCTGAAACAGATCCATTAGA
TAATATTCAATTAGATGATCAACAACCTTTAGTTATTTCTCCTCAATCGGATATTCCTGATGGGATTGTTTTTTCTGGTT
ATGCTCGTTATGGCTTTCATTTTTCTGATGATACGCAAAAATATGTCTCAGCGGATGGTCAATTAATTGGTAATGCTGCT
GGTCGTTTAGGTAATGAAAGTAATGGCGGTGAGTTCCAGTTTGCAAAAGGATTTGTTTCTGATAATGGCACCATTTGGGA
TGTGGTTGTCATGCTAGAGCATTGGGGAGATGAGGTTGGCTTGAAGAAATTCTATGCGGGGGCGACGAATGTCTTTGAAT
CTCAACCTAATGCTTATATTTGGGCTGGTCGAGATTTCCATAACCGACCACAGACAGGATTAAACGATTACTTCTGGATG
ATGAATGATTCTCAAGGTGCTGGTATTAAAAACCTTGAGTTTGGTAACGTGAAATTCGATATGGCTGCAGTTGCACAAGT
TGTTGATGGTGGTGGTACAGGTGACAGTGGTAATTACGCAATTACATCTAAATTACATGGAATTAATTTAACGGACGCAT
TAGATCTTTCTTTCTATGCGAACTATGGTTTTTCCTCTAAAAATACTGAGACTGACAAGGACACGCAAACTTGTACGGGA
ACCGGTGCAGATAAGCAGTGTTATGTCGATGATATTGACTCGTACCAATTGGCGCTTGAGTTAAATCATAGTGTTGGAAT
GCTGAGTAATAAGTTTGTGGCTCGCTATGGTAATAACGTTGATAACAATATTTTTAATAAGACAGAAGATTTATCGACGT
TGTTGATGCAGCTAGAAGGTAAGTTAGTGATGAGCAATCAAACTAATATTGAATATCTAGTTGGTTATCAATCATTAGAA
GATAAAAATGCGAGTCAAGATGACCGAGCTAACTACAGTGCTATTGTGCGTCCCACTTATGCATGGAATAACATTCACTC
GACATGGCTAGAAGCGGGTTATTCACTGGTTGATTTTGATAATCAAAGCGGACAAAACGATGCTTGGAAAGTAACCTTAT
CTCAAAATATTAGCTTTGATATGGATTCAGGTGCAAGACCAATGTTGAGATTTTACGCAACCGTTGGCGACTCAAATACA
GAAGTGGATTTAACTCGTGGAGAAACGAGTAAGCAAGATACTTTTGCCGTTGGTGCTATGTGGGAAGCATGGTGGTAA

Upstream 100 bases:

>100_bases
AGTAAATAATTTAATTAGTTCATGAATGAGTCGTAAATATAATTCGATAATATTCATGATGATTTTAAATTGCTGCTTTA
ATATTTATTAAGGAATTATA

Downstream 100 bases:

>100_bases
CCAAAAGGATATAAAATAAGGGGGGAATTGGGCTAGCAGCAATACTATGTGCTAGCCCAGTTTTCATTAGTATTCTTCAG
CCATGCGATACGGAGGTAAA

Product: outer membrane protein S

Products: NA

Alternate protein names: Maltose-inducible porin [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKLLPVALAVTATLSSFSTFAETDPLDNIQLDDQQPLVISPQSDIPDGIVFSGYARYGFHFSDDTQKYVSADGQLIGNAA
GRLGNESNGGEFQFAKGFVSDNGTIWDVVVMLEHWGDEVGLKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWM
MNDSQGAGIKNLEFGNVKFDMAAVAQVVDGGGTGDSGNYAITSKLHGINLTDALDLSFYANYGFSSKNTETDKDTQTCTG
TGADKQCYVDDIDSYQLALELNHSVGMLSNKFVARYGNNVDNNIFNKTEDLSTLLMQLEGKLVMSNQTNIEYLVGYQSLE
DKNASQDDRANYSAIVRPTYAWNNIHSTWLEAGYSLVDFDNQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSNT
EVDLTRGETSKQDTFAVGAMWEAWW

Sequences:

>Translated_425_residues
MKLLPVALAVTATLSSFSTFAETDPLDNIQLDDQQPLVISPQSDIPDGIVFSGYARYGFHFSDDTQKYVSADGQLIGNAA
GRLGNESNGGEFQFAKGFVSDNGTIWDVVVMLEHWGDEVGLKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWM
MNDSQGAGIKNLEFGNVKFDMAAVAQVVDGGGTGDSGNYAITSKLHGINLTDALDLSFYANYGFSSKNTETDKDTQTCTG
TGADKQCYVDDIDSYQLALELNHSVGMLSNKFVARYGNNVDNNIFNKTEDLSTLLMQLEGKLVMSNQTNIEYLVGYQSLE
DKNASQDDRANYSAIVRPTYAWNNIHSTWLEAGYSLVDFDNQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSNT
EVDLTRGETSKQDTFAVGAMWEAWW
>Mature_425_residues
MKLLPVALAVTATLSSFSTFAETDPLDNIQLDDQQPLVISPQSDIPDGIVFSGYARYGFHFSDDTQKYVSADGQLIGNAA
GRLGNESNGGEFQFAKGFVSDNGTIWDVVVMLEHWGDEVGLKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWM
MNDSQGAGIKNLEFGNVKFDMAAVAQVVDGGGTGDSGNYAITSKLHGINLTDALDLSFYANYGFSSKNTETDKDTQTCTG
TGADKQCYVDDIDSYQLALELNHSVGMLSNKFVARYGNNVDNNIFNKTEDLSTLLMQLEGKLVMSNQTNIEYLVGYQSLE
DKNASQDDRANYSAIVRPTYAWNNIHSTWLEAGYSLVDFDNQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSNT
EVDLTRGETSKQDTFAVGAMWEAWW

Specific function: Involved in the transport of maltose and maltodextrins [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790469, Length=435, Percent_Identity=23.2183908045977, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790157, Length=430, Percent_Identity=23.953488372093, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 46921; Mature: 46921

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLPVALAVTATLSSFSTFAETDPLDNIQLDDQQPLVISPQSDIPDGIVFSGYARYGFH
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCCEEEECHHHCCEE
FSDDTQKYVSADGQLIGNAAGRLGNESNGGEFQFAKGFVSDNGTIWDVVVMLEHWGDEVG
ECCCCHHHHCCCCEEEECHHHCCCCCCCCCEEEEEEEEECCCCCEEHEEHHHHHCCCHHC
LKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWMMNDSQGAGIKNLEFGNVKFD
HHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEH
MAAVAQVVDGGGTGDSGNYAITSKLHGINLTDALDLSFYANYGFSSKNTETDKDTQTCTG
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEC
TGADKQCYVDDIDSYQLALELNHSVGMLSNKFVARYGNNVDNNIFNKTEDLSTLLMQLEG
CCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
KLVMSNQTNIEYLVGYQSLEDKNASQDDRANYSAIVRPTYAWNNIHSTWLEAGYSLVDFD
EEEEECCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEECEEECCCHHHHHHHCCCEEEECC
NQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSNTEVDLTRGETSKQDTFAVGAM
CCCCCCCEEEEEEECCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEE
WEAWW
EECCC
>Mature Secondary Structure
MKLLPVALAVTATLSSFSTFAETDPLDNIQLDDQQPLVISPQSDIPDGIVFSGYARYGFH
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCCEEEECHHHCCEE
FSDDTQKYVSADGQLIGNAAGRLGNESNGGEFQFAKGFVSDNGTIWDVVVMLEHWGDEVG
ECCCCHHHHCCCCEEEECHHHCCCCCCCCCEEEEEEEEECCCCCEEHEEHHHHHCCCHHC
LKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWMMNDSQGAGIKNLEFGNVKFD
HHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEH
MAAVAQVVDGGGTGDSGNYAITSKLHGINLTDALDLSFYANYGFSSKNTETDKDTQTCTG
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEC
TGADKQCYVDDIDSYQLALELNHSVGMLSNKFVARYGNNVDNNIFNKTEDLSTLLMQLEG
CCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
KLVMSNQTNIEYLVGYQSLEDKNASQDDRANYSAIVRPTYAWNNIHSTWLEAGYSLVDFD
EEEEECCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEECEEECCCHHHHHHHCCCEEEECC
NQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSNTEVDLTRGETSKQDTFAVGAM
CCCCCCCEEEEEEECCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEE
WEAWW
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA