Click here to switch to the map view.

The map label for this gene is yfiH [C]

Identifier: 59711172

GI number: 59711172

Start: 613173

End: 613907

Strand: Direct

Name: yfiH [C]

Synonym: VF_0565

Alternate gene names: 59711172

Gene position: 613173-613907 (Clockwise)

Preceding gene: 59711171

Following gene: 59711173

Centisome position: 21.16

GC content: 37.82

Gene sequence:

>735_bases
ATGTCATTGATTTCACCAAAATGGTCAGCGCCTAAATCAGTTAAAGTATTCAGTACAACTCGTATTGGAGGAGTATCAAG
TTCCCCATTTGATAGCTTTAACCTTGGAGACCATGTTGGTGATGATCATAAAGATGTTGTGCTCAATCGTGAAAAACTGA
TTACGTTGGGGCAGTTACCTACTGCACCAACGTGGTTAAATCAGATTCACTCAACAAGAGTTGTTCATTTACCGAATCAA
GATTTTTTTGAAACCCCACCGTCTGCTGACGCTGTATATACAAACCAAGCAAAACAAGTTTGTTGTGTTATGACTGCAGA
TTGCCTTCCGGTTGTAATATGCAATAAAGAAGGTACAGAGGTTGCTGCCGCACATGCAGGTTGGAGAGGTCTACTTGATG
GAGTATTAGAAAATACTGTTGAGCAATTTGCCTCCCATGATCTTATTGCCTGGTGTGGACCTGCTATTGGTGAAAAAGCG
TTTGAAGTAGGTAATGAAGTAAAAGAACTATTTTGCGAAAAAGATCCGCAAGCGATTAATGCATTTATTCCAAGTTCTAA
TGAAGGAAAATGGTTAGCTAATTTAGCTATGTTAGCCACACAACGTTTAAATAGTGTTGGTATAAATGACGTGCATTATT
CAAACCTTTGTACTTATCAAAATACAGATACGTTTTTCTCATATAGAAAAGAAGGAATTACAGGAAGACAAGCCACTCTT
ATTTGGTTTGAATAA

Upstream 100 bases:

>100_bases
AAACAATGGAGTTCCATGCTCCAATTCCTGATGACATGATTGCTTTATCTCAAGCGTTACGTGATGATGAACGTTTAATG
CATGAGGAAGAGTATTAATA

Downstream 100 bases:

>100_bases
CTCATATTTCTACCCCTTTATCCTTTCCTTAAGTATTGAACTTTCTGACCTTAGCCCCCATTTAGAAACTATATAGTTAC
TAGCTTTCTTCTTTTGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSLISPKWSAPKSVKVFSTTRIGGVSSSPFDSFNLGDHVGDDHKDVVLNREKLITLGQLPTAPTWLNQIHSTRVVHLPNQ
DFFETPPSADAVYTNQAKQVCCVMTADCLPVVICNKEGTEVAAAHAGWRGLLDGVLENTVEQFASHDLIAWCGPAIGEKA
FEVGNEVKELFCEKDPQAINAFIPSSNEGKWLANLAMLATQRLNSVGINDVHYSNLCTYQNTDTFFSYRKEGITGRQATL
IWFE

Sequences:

>Translated_244_residues
MSLISPKWSAPKSVKVFSTTRIGGVSSSPFDSFNLGDHVGDDHKDVVLNREKLITLGQLPTAPTWLNQIHSTRVVHLPNQ
DFFETPPSADAVYTNQAKQVCCVMTADCLPVVICNKEGTEVAAAHAGWRGLLDGVLENTVEQFASHDLIAWCGPAIGEKA
FEVGNEVKELFCEKDPQAINAFIPSSNEGKWLANLAMLATQRLNSVGINDVHYSNLCTYQNTDTFFSYRKEGITGRQATL
IWFE
>Mature_243_residues
SLISPKWSAPKSVKVFSTTRIGGVSSSPFDSFNLGDHVGDDHKDVVLNREKLITLGQLPTAPTWLNQIHSTRVVHLPNQD
FFETPPSADAVYTNQAKQVCCVMTADCLPVVICNKEGTEVAAAHAGWRGLLDGVLENTVEQFASHDLIAWCGPAIGEKAF
EVGNEVKELFCEKDPQAINAFIPSSNEGKWLANLAMLATQRLNSVGINDVHYSNLCTYQNTDTFFSYRKEGITGRQATLI
WFE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=156, Percent_Identity=29.4871794871795, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI190194372, Length=156, Percent_Identity=29.4871794871795, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788945, Length=243, Percent_Identity=51.0288065843621, Blast_Score=247, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26861; Mature: 26729

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISPKWSAPKSVKVFSTTRIGGVSSSPFDSFNLGDHVGDDHKDVVLNREKLITLGQLP
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEECHHHEEEECCCC
TAPTWLNQIHSTRVVHLPNQDFFETPPSADAVYTNQAKQVCCVMTADCLPVVICNKEGTE
CCHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCHHHEEEEEECCCEEEEEECCCCCE
VAAAHAGWRGLLDGVLENTVEQFASHDLIAWCGPAIGEKAFEVGNEVKELFCEKDPQAIN
EEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
AFIPSSNEGKWLANLAMLATQRLNSVGINDVHYSNLCTYQNTDTFFSYRKEGITGRQATL
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHCCCCCCEEEE
IWFE
EEEC
>Mature Secondary Structure 
SLISPKWSAPKSVKVFSTTRIGGVSSSPFDSFNLGDHVGDDHKDVVLNREKLITLGQLP
CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEECHHHEEEECCCC
TAPTWLNQIHSTRVVHLPNQDFFETPPSADAVYTNQAKQVCCVMTADCLPVVICNKEGTE
CCHHHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCHHHEEEEEECCCEEEEEECCCCCE
VAAAHAGWRGLLDGVLENTVEQFASHDLIAWCGPAIGEKAFEVGNEVKELFCEKDPQAIN
EEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
AFIPSSNEGKWLANLAMLATQRLNSVGINDVHYSNLCTYQNTDTFFSYRKEGITGRQATL
EECCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHCCCCCCEEEE
IWFE
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]