Click here to switch to the map view.

The map label for this gene is 59711151

Identifier: 59711151

GI number: 59711151

Start: 593294

End: 593893

Strand: Direct

Name: 59711151

Synonym: VF_0544

Alternate gene names: NA

Gene position: 593294-593893 (Clockwise)

Preceding gene: 59711150

Following gene: 59711152

Centisome position: 20.48

GC content: 41.83

Gene sequence:

>600_bases
ATGAAATATAAACTTCCACTTGCCGCTATAGCATTATTAGGATTATCTGGGTGTGCGACGGCACCACCAACCAAACAGGA
TAATCTATGTGATATTTTCCGTGAAAAAAGCGGATGGTATGACGATGCTAAAGATATGACTGAAGAGTATGGTACGCCGA
TAAATGTAGCTATGGCTATTATGAAACAAGAAAGTAGCTTCAGAGCAACGGTGCGTCCACCTAGAACCAAACTACTTGGT
TTTATACCATGGAGTCGACCAAGTTCAGCTTATGGTTACGCACAAGCTCAGGACCCTGTATGGGGAGAATATGAAGATGA
AACGGGTGGTGGTTCTCGTAGTAGCTTTGATGATGCAATCATGTTCATCGGTTGGTACACTGACGGTTCTCAAAAGCAGT
TAGGGATTTCTAAGTGGGATCCATATAACCAATATTTGGCGTACCATGAAGGTCGCGGTGGTTTTAAACGCAAAAGCTAC
AAAAATAAACCACAATTGATTAAGATAGCTCGTAAGGTTGAATCTCAAGCCAAAACTTATGGTTGGCAATTAAAGCAATG
TAAGGCTGAGCTAGAGAGACAAAGCAGTTGGTGGTGGTAA

Upstream 100 bases:

>100_bases
ATATTTAGAAGAATACTTCAGTTATTTGAAGTGATACTTACGAAGAAATATCTAGCACTGTTATTCTATGGGTAGCAGTG
CTTTTTTTTGAGAAAAATTG

Downstream 100 bases:

>100_bases
GCCATCATTTATAACTTTAAAGGATTAAAATATGCCATTGTTAGATAGTTTTACTGTAGATCATACTCGTATGGAAGCAC
CGGCGGTTCGTGTTGCGAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKYKLPLAAIALLGLSGCATAPPTKQDNLCDIFREKSGWYDDAKDMTEEYGTPINVAMAIMKQESSFRATVRPPRTKLLG
FIPWSRPSSAYGYAQAQDPVWGEYEDETGGGSRSSFDDAIMFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGFKRKSY
KNKPQLIKIARKVESQAKTYGWQLKQCKAELERQSSWWW

Sequences:

>Translated_199_residues
MKYKLPLAAIALLGLSGCATAPPTKQDNLCDIFREKSGWYDDAKDMTEEYGTPINVAMAIMKQESSFRATVRPPRTKLLG
FIPWSRPSSAYGYAQAQDPVWGEYEDETGGGSRSSFDDAIMFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGFKRKSY
KNKPQLIKIARKVESQAKTYGWQLKQCKAELERQSSWWW
>Mature_199_residues
MKYKLPLAAIALLGLSGCATAPPTKQDNLCDIFREKSGWYDDAKDMTEEYGTPINVAMAIMKQESSFRATVRPPRTKLLG
FIPWSRPSSAYGYAQAQDPVWGEYEDETGGGSRSSFDDAIMFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGFKRKSY
KNKPQLIKIARKVESQAKTYGWQLKQCKAELERQSSWWW

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22736; Mature: 22736

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLPLAAIALLGLSGCATAPPTKQDNLCDIFREKSGWYDDAKDMTEEYGTPINVAMAI
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH
MKQESSFRATVRPPRTKLLGFIPWSRPSSAYGYAQAQDPVWGEYEDETGGGSRSSFDDAI
HHHCCCCEEECCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
MFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGFKRKSYKNKPQLIKIARKVESQAKTY
EEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GWQLKQCKAELERQSSWWW
CHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYKLPLAAIALLGLSGCATAPPTKQDNLCDIFREKSGWYDDAKDMTEEYGTPINVAMAI
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHH
MKQESSFRATVRPPRTKLLGFIPWSRPSSAYGYAQAQDPVWGEYEDETGGGSRSSFDDAI
HHHCCCCEEECCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
MFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGFKRKSYKNKPQLIKIARKVESQAKTY
EEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GWQLKQCKAELERQSSWWW
CHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA