| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is gshA
Identifier: 59711150
GI number: 59711150
Start: 591662
End: 593227
Strand: Direct
Name: gshA
Synonym: VF_0543
Alternate gene names: 59711150
Gene position: 591662-593227 (Clockwise)
Preceding gene: 59711149
Following gene: 59711151
Centisome position: 20.42
GC content: 38.06
Gene sequence:
>1566_bases TTGACCGAATTTATCAACCGATTACAGAAAGTCGCTTCCAATCCTAACGCCTTTAAAAAAACAGGCCGAGGAATTGAAAG AGAAACGCTTCGATTCACTCTAGGAGCGTCACTTTCAACTAAGCCACACCCAGAAGGCGTAGGTTCAGCATTAACACATA AATACATCACAACAGATTTTGCAGAATCATTATTAGAGTTTATTACTCCAGTATCAAATGATGTTGATACCGTATTAAAG CAATTAGAAGATGTACACCACTATACGGTTTCTCACATGGGAGACGAAAAACTATGGCCACTTTCAATGCCATGTTTTGT TACTCATGATGACGATATTACGTTAGCTCAATACGGTGAATCGAACGTAGGTAAACTGAAAACAACTTATCGTGAAGGCC TAAAGCGTCGTTACGGTAGCGTGATGCAAGTGATTTCTGGCGTACATTTTAATTTTTCATTTTCAACAGAGTTTTGGGAT GAATTATTTGGTGAACAATCAGAAGACCAAAGAAAAGAATCGGTATCAGATGCTTATTTTGCATTAATTCGAAACTACTA CCGTTTTGGTTGGTTAATTCCTTATTTCTTTGGTGCTTCACCGGCATTATGTAGCTCATTTATTCAAGGTCGTGAAACCT CTATGGACTTTGAATCCTTAGGTAAGACTTATTACTTACCTTATGCTACATCGTTGCGTCTGAGTGATTTGGGCTATACC AATGATGCTCAAAGTAATCTAAAAATTAGCCTGAACAGCGTTAATGAATATGTTGATGGTTTAAATAAAGCCATTCGAAC ACCATCAGAAGAGTTCGCTAAAATAGGTTTAAAAGAAGGTGATAAACATATTCAGTTGAACTCAAATGTTCTTCAAATTG AAAATGAACTTTATGCTCCAATTCGCCCAAAACGAGTGACAAAAAGTGGCGAAAGACCTTCTGAAGCACTAGAAAGAGAC GGGGTTGAATACATTGAAGTTCGTTCTTTAGATGTAAACCCGTACAGTCCAATTGGTGTTAATGAAGATCAAGTTCGCTT CTTAGATATGTTCTTAACTTGGACTGTTCTGAGTGACTCTGCACCAATGAATGACAGTGAAATGGCCTGTTGGAAAGACA ACTGGAATAAGATCATTGAAAAAGGTCGTAAGCCGGGGTTAGAACTAAAAATTGGTTGCCAAGGTGAACGATTAACTCAA AAAGCATGGGCTGAAAGAGTATTTGAAGATTTGCTGGTTATCGCAAAAGAAATGGATCGCGTTAACGGTGATGACGCTTA TCAACAGACTCATAAACGCCTAAGTGCAATGATTGATGATCCTGAGCTAACGATTTCAGGTCGTCTATTGGCTGAAACAA AAGCCGCTGGCGGTATCGGTGTGATTGGTTGTAAATTGGCGGTAGAGCATCGTGAAACACACTTAGCTCATCAATATCGT TTTTATACTAAGCAAGAGTTAGATGCTGAAGTTGAACGTTCAGTTCAGGCACAAAAAGAAATTGAAGCGAATGATAAGCT TTCTTTTTCTGAATATTTAGAAGAATACTTCAGTTATTTGAAGTGA
Upstream 100 bases:
>100_bases TTATTGCCGTTTTTTCGTATCCAACTATCGATAAAATTTGTTAGTATCCATGACATAAATCAACATAATAATGTTGTTAC CTCAATAGCGAGATTGTATT
Downstream 100 bases:
>100_bases TACTTACGAAGAAATATCTAGCACTGTTATTCTATGGGTAGCAGTGCTTTTTTTTGAGAAAAATTGATGAAATATAAACT TCCACTTGCCGCTATAGCAT
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: Gamma-ECS; GCS; Gamma-glutamylcysteine synthetase
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTEFINRLQKVASNPNAFKKTGRGIERETLRFTLGASLSTKPHPEGVGSALTHKYITTDFAESLLEFITPVSNDVDTVLK QLEDVHHYTVSHMGDEKLWPLSMPCFVTHDDDITLAQYGESNVGKLKTTYREGLKRRYGSVMQVISGVHFNFSFSTEFWD ELFGEQSEDQRKESVSDAYFALIRNYYRFGWLIPYFFGASPALCSSFIQGRETSMDFESLGKTYYLPYATSLRLSDLGYT NDAQSNLKISLNSVNEYVDGLNKAIRTPSEEFAKIGLKEGDKHIQLNSNVLQIENELYAPIRPKRVTKSGERPSEALERD GVEYIEVRSLDVNPYSPIGVNEDQVRFLDMFLTWTVLSDSAPMNDSEMACWKDNWNKIIEKGRKPGLELKIGCQGERLTQ KAWAERVFEDLLVIAKEMDRVNGDDAYQQTHKRLSAMIDDPELTISGRLLAETKAAGGIGVIGCKLAVEHRETHLAHQYR FYTKQELDAEVERSVQAQKEIEANDKLSFSEYLEEYFSYLK
Sequences:
>Translated_521_residues MTEFINRLQKVASNPNAFKKTGRGIERETLRFTLGASLSTKPHPEGVGSALTHKYITTDFAESLLEFITPVSNDVDTVLK QLEDVHHYTVSHMGDEKLWPLSMPCFVTHDDDITLAQYGESNVGKLKTTYREGLKRRYGSVMQVISGVHFNFSFSTEFWD ELFGEQSEDQRKESVSDAYFALIRNYYRFGWLIPYFFGASPALCSSFIQGRETSMDFESLGKTYYLPYATSLRLSDLGYT NDAQSNLKISLNSVNEYVDGLNKAIRTPSEEFAKIGLKEGDKHIQLNSNVLQIENELYAPIRPKRVTKSGERPSEALERD GVEYIEVRSLDVNPYSPIGVNEDQVRFLDMFLTWTVLSDSAPMNDSEMACWKDNWNKIIEKGRKPGLELKIGCQGERLTQ KAWAERVFEDLLVIAKEMDRVNGDDAYQQTHKRLSAMIDDPELTISGRLLAETKAAGGIGVIGCKLAVEHRETHLAHQYR FYTKQELDAEVERSVQAQKEIEANDKLSFSEYLEEYFSYLK >Mature_520_residues TEFINRLQKVASNPNAFKKTGRGIERETLRFTLGASLSTKPHPEGVGSALTHKYITTDFAESLLEFITPVSNDVDTVLKQ LEDVHHYTVSHMGDEKLWPLSMPCFVTHDDDITLAQYGESNVGKLKTTYREGLKRRYGSVMQVISGVHFNFSFSTEFWDE LFGEQSEDQRKESVSDAYFALIRNYYRFGWLIPYFFGASPALCSSFIQGRETSMDFESLGKTYYLPYATSLRLSDLGYTN DAQSNLKISLNSVNEYVDGLNKAIRTPSEEFAKIGLKEGDKHIQLNSNVLQIENELYAPIRPKRVTKSGERPSEALERDG VEYIEVRSLDVNPYSPIGVNEDQVRFLDMFLTWTVLSDSAPMNDSEMACWKDNWNKIIEKGRKPGLELKIGCQGERLTQK AWAERVFEDLLVIAKEMDRVNGDDAYQQTHKRLSAMIDDPELTISGRLLAETKAAGGIGVIGCKLAVEHRETHLAHQYRF YTKQELDAEVERSVQAQKEIEANDKLSFSEYLEEYFSYLK
Specific function: Glutathione biosynthesis; first step. [C]
COG id: COG2918
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1789044, Length=504, Percent_Identity=55.1587301587302, Blast_Score=582, Evalue=1e-167,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSH1_VIBF1 (Q5E7F8)
Other databases:
- EMBL: CP000020 - RefSeq: YP_203926.1 - ProteinModelPortal: Q5E7F8 - SMR: Q5E7F8 - STRING: Q5E7F8 - GeneID: 3278110 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_0543 - NMPDR: fig|312309.3.peg.593 - eggNOG: COG2918 - HOGENOM: HBG289023 - OMA: FGLIRNY - PhylomeDB: Q5E7F8 - ProtClustDB: PRK02107 - BioCyc: VFIS312309:VF0543-MONOMER - HAMAP: MF_00578 - InterPro: IPR007370 - InterPro: IPR006334 - TIGRFAMs: TIGR01434
Pfam domain/function: PF04262 Glu_cys_ligase
EC number: =6.3.2.2
Molecular weight: Translated: 59405; Mature: 59274
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFINRLQKVASNPNAFKKTGRGIERETLRFTLGASLSTKPHPEGVGSALTHKYITTDF CHHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH AESLLEFITPVSNDVDTVLKQLEDVHHYTVSHMGDEKLWPLSMPCFVTHDDDITLAQYGE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEHHHCCC SNVGKLKTTYREGLKRRYGSVMQVISGVHFNFSFSTEFWDELFGEQSEDQRKESVSDAYF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHHHH ALIRNYYRFGWLIPYFFGASPALCSSFIQGRETSMDFESLGKTYYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NDAQSNLKISLNSVNEYVDGLNKAIRTPSEEFAKIGLKEGDKHIQLNSNVLQIENELYAP CCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCEEEECHHHCCC IRPKRVTKSGERPSEALERDGVEYIEVRSLDVNPYSPIGVNEDQVRFLDMFLTWTVLSDS CCCHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC APMNDSEMACWKDNWNKIIEKGRKPGLELKIGCQGERLTQKAWAERVFEDLLVIAKEMDR CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC VNGDDAYQQTHKRLSAMIDDPELTISGRLLAETKAAGGIGVIGCKLAVEHRETHLAHQYR CCCCHHHHHHHHHHHHHCCCCCEEECCEEEEHHCCCCCCEEEEEEEEHHHHHHHHHHHHH FYTKQELDAEVERSVQAQKEIEANDKLSFSEYLEEYFSYLK HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TEFINRLQKVASNPNAFKKTGRGIERETLRFTLGASLSTKPHPEGVGSALTHKYITTDF HHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH AESLLEFITPVSNDVDTVLKQLEDVHHYTVSHMGDEKLWPLSMPCFVTHDDDITLAQYGE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEHHHCCC SNVGKLKTTYREGLKRRYGSVMQVISGVHFNFSFSTEFWDELFGEQSEDQRKESVSDAYF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHHHH ALIRNYYRFGWLIPYFFGASPALCSSFIQGRETSMDFESLGKTYYLPYATSLRLSDLGYT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCEEECCCCCC NDAQSNLKISLNSVNEYVDGLNKAIRTPSEEFAKIGLKEGDKHIQLNSNVLQIENELYAP CCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCEEEECHHHCCC IRPKRVTKSGERPSEALERDGVEYIEVRSLDVNPYSPIGVNEDQVRFLDMFLTWTVLSDS CCCHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC APMNDSEMACWKDNWNKIIEKGRKPGLELKIGCQGERLTQKAWAERVFEDLLVIAKEMDR CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC VNGDDAYQQTHKRLSAMIDDPELTISGRLLAETKAAGGIGVIGCKLAVEHRETHLAHQYR CCCCHHHHHHHHHHHHHCCCCCEEECCEEEEHHCCCCCCEEEEEEEEHHHHHHHHHHHHH FYTKQELDAEVERSVQAQKEIEANDKLSFSEYLEEYFSYLK HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA