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The map label for this gene is tadB1

Identifier: 59711124

GI number: 59711124

Start: 553405

End: 554322

Strand: Direct

Name: tadB1

Synonym: VF_0517

Alternate gene names: NA

Gene position: 553405-554322 (Clockwise)

Preceding gene: 59711123

Following gene: 59711125

Centisome position: 19.1

GC content: 37.69

Gene sequence:

>918_bases
ATGTCTTGGATTGCAATCGGTATTGGCTTAATTTTATTGGGCTTTGCTTTTGGTGATAAGCCGGTAAAAAAGAGTCAATA
TTTAGAAAAACTAAATGTGACCCAGTTTGTTGATGATCTTAATAGCACAGAGCAAGCGATCAATTTAGCTTCCTTAACAG
AGCGAACGTTTCGACAAAAACTTGAGTTTATTTGGAAAAACATAGCGAGACAATTAGGTAATGGTGCTGCGTTAAAACTG
GTTTTTTCCATATGTGTTTTTGCTTTAATAGGCCTGTTGATTAACCGTTCTATGATTCATGCCTCGCCTTATATTGTGGT
CTTTATTGCTATCGTAATAGGACTGATTTGGGGATATGTTTGGCTTCAAGAAAAAGAGAAAAAACAATTTAATGAGCGCT
TTCCGGATGCTCTTAATATGCTATCGAGTGCGGTATCGGCAGGTGAAAGTATCACTCATGCGATTGCTTTTGTGGGCAAG
AAACTTGAGGGTGATGTGGGCAAAGAATTTAAAATAATGGGAGAGCGTTTGCAGCTTGGTGAGAGTCCAGATGAAGTCTT
TAAGAAATCATGTGTTCGTTTCCCTTATCCTGCTTTTCGTTTTTTTGTTATTACATTACGAGCAAACATGAACCGAGGTG
GTCAATTAAGGGATGTTATTTCACGGTTGAACCGTTTGATGTTTGATGCGAGAGCTGTAGAGAGAAAGAAATACGCTCTA
ACATCAGAAGCCAGAATATCGGCAAAAATAGTCTGTGCGACACCTTTTTTCTTTTTGTTTATTTTGCAGTTCCTCAGCCC
TGAAAATTATGAATTCGTCATGTTTCACGCTGAAGGTAGACCTATTTTATATTATGTACTCATTAGTGAAGCTATAGGGA
TGCTTATTATTTGGGGCTTATTAAAAGGAACCAAGTAA

Upstream 100 bases:

>100_bases
GCTTAATGCAACGCTCTGTGTTGATGGAAAAAGCACGATTCTTTGGTATGGAAGAAAAAATACAATCAGCATTTAGAGCC
CCTTACGCAGAGGTACAGTA

Downstream 100 bases:

>100_bases
TGTCAGATTGGTATTTATTTATATCCATTACGCTTATTTCATTTGGCTTGATGCTTATTGTCTATTTAAGCATTACAAAG
TTTTTAAGAGAAAAGCAGTT

Product: TadB-like protein involved in pilus formation and/or protein secretion

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; TadB Protein; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Flp Pilus Assembly Protein; Tight Adherence Protein B; Type II Secretion System F Domain Protein; Bacterial Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; MaoC Protein; Flp Pilus Assembly Protein Tadb; Tight Adherance Operon Protein B; Secretion System Protein TadB; TadB-Like Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Protein F; Type II Secretion System F Domain; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSWIAIGIGLILLGFAFGDKPVKKSQYLEKLNVTQFVDDLNSTEQAINLASLTERTFRQKLEFIWKNIARQLGNGAALKL
VFSICVFALIGLLINRSMIHASPYIVVFIAIVIGLIWGYVWLQEKEKKQFNERFPDALNMLSSAVSAGESITHAIAFVGK
KLEGDVGKEFKIMGERLQLGESPDEVFKKSCVRFPYPAFRFFVITLRANMNRGGQLRDVISRLNRLMFDARAVERKKYAL
TSEARISAKIVCATPFFFLFILQFLSPENYEFVMFHAEGRPILYYVLISEAIGMLIIWGLLKGTK

Sequences:

>Translated_305_residues
MSWIAIGIGLILLGFAFGDKPVKKSQYLEKLNVTQFVDDLNSTEQAINLASLTERTFRQKLEFIWKNIARQLGNGAALKL
VFSICVFALIGLLINRSMIHASPYIVVFIAIVIGLIWGYVWLQEKEKKQFNERFPDALNMLSSAVSAGESITHAIAFVGK
KLEGDVGKEFKIMGERLQLGESPDEVFKKSCVRFPYPAFRFFVITLRANMNRGGQLRDVISRLNRLMFDARAVERKKYAL
TSEARISAKIVCATPFFFLFILQFLSPENYEFVMFHAEGRPILYYVLISEAIGMLIIWGLLKGTK
>Mature_304_residues
SWIAIGIGLILLGFAFGDKPVKKSQYLEKLNVTQFVDDLNSTEQAINLASLTERTFRQKLEFIWKNIARQLGNGAALKLV
FSICVFALIGLLINRSMIHASPYIVVFIAIVIGLIWGYVWLQEKEKKQFNERFPDALNMLSSAVSAGESITHAIAFVGKK
LEGDVGKEFKIMGERLQLGESPDEVFKKSCVRFPYPAFRFFVITLRANMNRGGQLRDVISRLNRLMFDARAVERKKYALT
SEARISAKIVCATPFFFLFILQFLSPENYEFVMFHAEGRPILYYVLISEAIGMLIIWGLLKGTK

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34627; Mature: 34496

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWIAIGIGLILLGFAFGDKPVKKSQYLEKLNVTQFVDDLNSTEQAINLASLTERTFRQK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LEFIWKNIARQLGNGAALKLVFSICVFALIGLLINRSMIHASPYIVVFIAIVIGLIWGYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH
WLQEKEKKQFNERFPDALNMLSSAVSAGESITHAIAFVGKKLEGDVGKEFKIMGERLQLG
HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ESPDEVFKKSCVRFPYPAFRFFVITLRANMNRGGQLRDVISRLNRLMFDARAVERKKYAL
CCHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEARISAKIVCATPFFFLFILQFLSPENYEFVMFHAEGRPILYYVLISEAIGMLIIWGL
CCCCHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHH
LKGTK
HHCCC
>Mature Secondary Structure 
SWIAIGIGLILLGFAFGDKPVKKSQYLEKLNVTQFVDDLNSTEQAINLASLTERTFRQK
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LEFIWKNIARQLGNGAALKLVFSICVFALIGLLINRSMIHASPYIVVFIAIVIGLIWGYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH
WLQEKEKKQFNERFPDALNMLSSAVSAGESITHAIAFVGKKLEGDVGKEFKIMGERLQLG
HHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ESPDEVFKKSCVRFPYPAFRFFVITLRANMNRGGQLRDVISRLNRLMFDARAVERKKYAL
CCHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEARISAKIVCATPFFFLFILQFLSPENYEFVMFHAEGRPILYYVLISEAIGMLIIWGL
CCCCHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHH
LKGTK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA