Click here to switch to the map view.

The map label for this gene is 59711122

Identifier: 59711122

GI number: 59711122

Start: 550871

End: 552109

Strand: Direct

Name: 59711122

Synonym: VF_0515

Alternate gene names: NA

Gene position: 550871-552109 (Clockwise)

Preceding gene: 59711121

Following gene: 59711123

Centisome position: 19.01

GC content: 36.48

Gene sequence:

>1239_bases
ATGTTTGATTTGGCAGAGCGTTTAAGTTCGAACAAAAGTAATGAAAGTAAATTAAGCCATAAGTTAAAAACAATGCTGTT
TTACCAGACAGAAGAGTGCCGTTCATTGGTTAATGAATCTTTTCGATTTGATGGTAAGGATGAACCTAAATGCGTTAAAA
ATCGTGATGAAGAGTTTCGCCAGATTGATTTATTAAATCCACCTGAAGTGGTGATTATTGAACTAAATGCCAGTCAAGAT
GTAGTTCAAGATGCACAGCGATTAGCTCATTTATTACCAAGCCAAGTATCTGTAGTTATTGTTGGCTCTGAAGACGCAAT
TTCAACGATTCGTTTACTTAAAGAGATGGGTTTTTATTACCTGTTTTGGCCCGTAAGCAAGCAAGAATGTTCAGATTTTA
TGAAGCACGTTCTTGATAACCATGAGCAACATCGAGGTTTGATGGCCAATCGAAAATCTAAGCGAGTTGCTATGGTTGGT
GTGAAAGGCGGTGTTGGCACTTCTCTTATTAGTAGTGAAGTATCTCGAATGCTTTCATTTGATAAAGGCGTTTCAACTCT
CCTTGTTGATCATAATTATCATGGCGGAAATCTTGATATTTTTATGGGGTTAAAGCAGCACCAAAAAAGAATCGTTCAAA
AAGGAACATTAATTTCAAATATTGATGGTACTTATGCTCTTGGTTTAATTCGTAAAATTACGCCAATGTTGTCGATGTTA
GCTATCGATTCTGATGAATTGAACGCGCAAGAATTGAAAGAATATACGCTGGCAGTACAAGAGCAGGCGCTTAAAAATTC
AAGTGTGATGATTGAAGATCATGCTCATTTAATTCGTAATGAAGATGACATTATTAAGCTCTTGCAACAGGTTGATGTTT
TAGTACTTGTTTTTGATGCAACGGTTTCGTCATTACGTGATTACAATCGATTAAATCAGTTAGTTAAGAAGAATAATCTA
GATAACCAAACCCGTGTTATTTCGGTACTGAATTCATCACGTCCGAGTAATAGCGGTTCGGTTTCGGCTGAAGAAATTGA
AAAGTACAGCGGGCAAAGAGCAACCATCAGTATTCCATATGATGATAAAGCACCGCAATACGTACTTGAAGGGTTACAAA
TCGTAAAAACTAAATCAGCTATGGCACTGCCTCTTATGAATTTAGTTGCTTTGATTTTAGGTGAAGAACCAAAGCAAGAA
AGCCGTTCATTTTTGAGTTTCTTTAAAAAGAAAGGGTAG

Upstream 100 bases:

>100_bases
ACCGAAAGTAATCGCTGGCATTCGATGGTTAATCCTGAAAATGCAATGTAACTACCTCGCAAAGAGCTAGTGTAATTAAC
ATCATATTATTGGAGCTATT

Downstream 100 bases:

>100_bases
TAAAAAATGAACAATAATAAAGCGCTGTATATTCAATTAAGAACTCAAATATTTAATGCGTTAGAGCCTGAAGCGTTAAA
TAAGTTAACCAAACAAGAGC

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: Chromosome Partitioning ATPase; Type II Secretion System Protein Z

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MFDLAERLSSNKSNESKLSHKLKTMLFYQTEECRSLVNESFRFDGKDEPKCVKNRDEEFRQIDLLNPPEVVIIELNASQD
VVQDAQRLAHLLPSQVSVVIVGSEDAISTIRLLKEMGFYYLFWPVSKQECSDFMKHVLDNHEQHRGLMANRKSKRVAMVG
VKGGVGTSLISSEVSRMLSFDKGVSTLLVDHNYHGGNLDIFMGLKQHQKRIVQKGTLISNIDGTYALGLIRKITPMLSML
AIDSDELNAQELKEYTLAVQEQALKNSSVMIEDHAHLIRNEDDIIKLLQQVDVLVLVFDATVSSLRDYNRLNQLVKKNNL
DNQTRVISVLNSSRPSNSGSVSAEEIEKYSGQRATISIPYDDKAPQYVLEGLQIVKTKSAMALPLMNLVALILGEEPKQE
SRSFLSFFKKKG

Sequences:

>Translated_412_residues
MFDLAERLSSNKSNESKLSHKLKTMLFYQTEECRSLVNESFRFDGKDEPKCVKNRDEEFRQIDLLNPPEVVIIELNASQD
VVQDAQRLAHLLPSQVSVVIVGSEDAISTIRLLKEMGFYYLFWPVSKQECSDFMKHVLDNHEQHRGLMANRKSKRVAMVG
VKGGVGTSLISSEVSRMLSFDKGVSTLLVDHNYHGGNLDIFMGLKQHQKRIVQKGTLISNIDGTYALGLIRKITPMLSML
AIDSDELNAQELKEYTLAVQEQALKNSSVMIEDHAHLIRNEDDIIKLLQQVDVLVLVFDATVSSLRDYNRLNQLVKKNNL
DNQTRVISVLNSSRPSNSGSVSAEEIEKYSGQRATISIPYDDKAPQYVLEGLQIVKTKSAMALPLMNLVALILGEEPKQE
SRSFLSFFKKKG
>Mature_412_residues
MFDLAERLSSNKSNESKLSHKLKTMLFYQTEECRSLVNESFRFDGKDEPKCVKNRDEEFRQIDLLNPPEVVIIELNASQD
VVQDAQRLAHLLPSQVSVVIVGSEDAISTIRLLKEMGFYYLFWPVSKQECSDFMKHVLDNHEQHRGLMANRKSKRVAMVG
VKGGVGTSLISSEVSRMLSFDKGVSTLLVDHNYHGGNLDIFMGLKQHQKRIVQKGTLISNIDGTYALGLIRKITPMLSML
AIDSDELNAQELKEYTLAVQEQALKNSSVMIEDHAHLIRNEDDIIKLLQQVDVLVLVFDATVSSLRDYNRLNQLVKKNNL
DNQTRVISVLNSSRPSNSGSVSAEEIEKYSGQRATISIPYDDKAPQYVLEGLQIVKTKSAMALPLMNLVALILGEEPKQE
SRSFLSFFKKKG

Specific function: Unknown

COG id: COG4963

COG function: function code U; Flp pilus assembly protein, ATPase CpaE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46462; Mature: 46462

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLAERLSSNKSNESKLSHKLKTMLFYQTEECRSLVNESFRFDGKDEPKCVKNRDEEFR
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHH
QIDLLNPPEVVIIELNASQDVVQDAQRLAHLLPSQVSVVIVGSEDAISTIRLLKEMGFYY
EECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEE
LFWPVSKQECSDFMKHVLDNHEQHRGLMANRKSKRVAMVGVKGGVGTSLISSEVSRMLSF
EEECCCHHHHHHHHHHHHCCCHHHCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
DKGVSTLLVDHNYHGGNLDIFMGLKQHQKRIVQKGTLISNIDGTYALGLIRKITPMLSML
HCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH
AIDSDELNAQELKEYTLAVQEQALKNSSVMIEDHAHLIRNEDDIIKLLQQVDVLVLVFDA
HCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHHHHHHHHHEEHHHH
TVSSLRDYNRLNQLVKKNNLDNQTRVISVLNSSRPSNSGSVSAEEIEKYSGQRATISIPY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCC
DDKAPQYVLEGLQIVKTKSAMALPLMNLVALILGEEPKQESRSFLSFFKKKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDLAERLSSNKSNESKLSHKLKTMLFYQTEECRSLVNESFRFDGKDEPKCVKNRDEEFR
CCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHH
QIDLLNPPEVVIIELNASQDVVQDAQRLAHLLPSQVSVVIVGSEDAISTIRLLKEMGFYY
EECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEE
LFWPVSKQECSDFMKHVLDNHEQHRGLMANRKSKRVAMVGVKGGVGTSLISSEVSRMLSF
EEECCCHHHHHHHHHHHHCCCHHHCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
DKGVSTLLVDHNYHGGNLDIFMGLKQHQKRIVQKGTLISNIDGTYALGLIRKITPMLSML
HCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHH
AIDSDELNAQELKEYTLAVQEQALKNSSVMIEDHAHLIRNEDDIIKLLQQVDVLVLVFDA
HCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHHHHHHHHHEEHHHH
TVSSLRDYNRLNQLVKKNNLDNQTRVISVLNSSRPSNSGSVSAEEIEKYSGQRATISIPY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCC
DDKAPQYVLEGLQIVKTKSAMALPLMNLVALILGEEPKQESRSFLSFFKKKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA