Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711117

Identifier: 59711117

GI number: 59711117

Start: 547556

End: 547771

Strand: Direct

Name: 59711117

Synonym: VF_0510

Alternate gene names: NA

Gene position: 547556-547771 (Clockwise)

Preceding gene: 59711116

Following gene: 59711118

Centisome position: 18.9

GC content: 37.5

Gene sequence:

>216_bases
ATGCTAACTAAATTATTCGTAAAGTCTCAACTTGCTCTTCAATCTTTCAAAAACGATGAGCGCGGTGTAACAGCAATTGA
ATATGCAATCATTGGTGTTTGTATGTCTGCTATTGTACTTGCTGTATTTAACGGTACATTACAAGAGGCATTACAAGGTG
CAATGGACACTATTTCAACTAATATTACAGCTGCCAACACAGCACCTGCTGAGTAA

Upstream 100 bases:

>100_bases
AAGTGGTTTTATTGTCGTCATTAAATTGACGCTAATTGATTGTATGAATAATATTCGCTTTGTTCACTTCGAACACATAT
TAATCAATAGCGGAGTTATT

Downstream 100 bases:

>100_bases
TATTAATTTATATGGAAATAAAGCTATTAATTATTAGCGTAGTAACTATAGCTAATATTTATGCTGTTTTTCATGATATA
AAAAATAGAAAAATATCTAA

Product: fimbrial protein precursor

Products: NA

Alternate protein names: Flp/Fap Pilin Component Superfamily Protein; Fimbrial Protein Flp/Fap Pilin Component; Fimbrial

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MLTKLFVKSQLALQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAPAE

Sequences:

>Translated_71_residues
MLTKLFVKSQLALQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAPAE
>Mature_71_residues
MLTKLFVKSQLALQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7506; Mature: 7506

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKLFVKSQLALQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTIST
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NITAANTAPAE
CCCCCCCCCCC
>Mature Secondary Structure
MLTKLFVKSQLALQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTIST
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NITAANTAPAE
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA